Gene annotation
Transcriptome id Sobic.002G068701.1
Synonym -
Functional annotation -
UniProt A0A1W0W2Q5
Pfam PF03171
Panther DB PTHR10869 PTHR10869:SF62
NCBI CDD -
KEGG Orthology K00472; prolyl 4-hydroxylase
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G18900 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os07g09630.1 : oxidoreductase, putative, expressed
MaizeGDB (Corn) Zm00025a016024
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G044200 C2 domain containing protein, putative, expressed -
2 Sobic.005G027250 - -
3 Sobic.006G099200 pollen allergen Cyn d 23, putative, expressed -
4 Sobic.010G032200 expressed protein -
5 Sobic.003G403000 "major aluminum tolerance, s a plasma membrane anion efflux transporter responsible for citrate release into the rhizosphere"(PubMedID : 17721535)@Aluminum tolerance(PubMedID : 17721535)@MATE efflux protein, putative, expressed -
6 Sobic.001G345300 pectinesterase, putative, expressed -
7 Sobic.004G338900 P21-Rho-binding domain containing protein, putative, expressed -
8 Sobic.005G067200 expressed protein -
9 Sobic.007G204800 receptor-like protein kinase 1, putative, expressed -
10 Sobic.008G141300 IBS1, putative, expressed -
11 Sobic.005G125200 OsFBX313 - F-box domain containing protein, expressed -
12 Sobic.001G160900 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
13 Sobic.002G160200 expressed protein -
14 Sobic.002G083100 cadmium/zinc-transporting ATPase, putative, expressed K01534: Zn2+/Cd2+-exporting ATPase
15 Sobic.004G180200 protein kinase family protein, putative, expressed -
16 Sobic.004G289100 OsSub20 - Putative Subtilisin homologue, expressed -
17 Sobic.001G152800 pollen preferential protein, putative, expressed -
18 Sobic.002G102600 - -
19 Sobic.008G129800 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
20 Sobic.003G322000 tyrosine protein kinase domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G068701 Sobic002G068701 Sobic009G044200 Sobic009G044200 Sobic002G068701--Sobic009G044200 Sobic005G027250 Sobic005G027250 Sobic002G068701--Sobic005G027250 Sobic006G099200 Sobic006G099200 Sobic002G068701--Sobic006G099200 Sobic010G032200 Sobic010G032200 Sobic002G068701--Sobic010G032200 Sobic003G403000 Sobic003G403000 Sobic002G068701--Sobic003G403000 Sobic001G345300 Sobic001G345300 Sobic002G068701--Sobic001G345300 Sobic004G338900 Sobic004G338900 Sobic002G068701--Sobic004G338900 Sobic005G067200 Sobic005G067200 Sobic002G068701--Sobic005G067200 Sobic007G204800 Sobic007G204800 Sobic002G068701--Sobic007G204800 Sobic009G044200--Sobic005G027250 Sobic009G044200--Sobic006G099200 Sobic009G044200--Sobic004G338900 Sobic005G125200 Sobic005G125200 Sobic009G044200--Sobic005G125200 Sobic002G160200 Sobic002G160200 Sobic009G044200--Sobic002G160200 Sobic009G044200--Sobic007G204800 Sobic001G160900 Sobic001G160900 Sobic009G044200--Sobic001G160900 Sobic002G083100 Sobic002G083100 Sobic009G044200--Sobic002G083100 Sobic009G044200--Sobic010G032200 Sobic005G027250--Sobic006G099200 Sobic005G027250--Sobic009G044200 Sobic005G027250--Sobic004G338900 Sobic005G027250--Sobic007G204800 Sobic005G027250--Sobic002G160200 Sobic005G027250--Sobic001G160900 Sobic005G027250--Sobic002G083100 Sobic005G027250--Sobic010G032200 Sobic005G027250--Sobic005G125200 Sobic006G099200--Sobic005G027250 Sobic006G099200--Sobic007G204800 Sobic006G099200--Sobic004G338900 Sobic006G099200--Sobic009G044200 Sobic006G099200--Sobic001G160900 Sobic006G099200--Sobic010G032200 Sobic006G099200--Sobic002G160200 Sobic006G099200--Sobic002G083100 Sobic001G120800 Sobic001G120800 Sobic006G099200--Sobic001G120800 Sobic010G032200--Sobic006G099200 Sobic010G032200--Sobic005G027250 Sobic010G032200--Sobic007G204800 Sobic010G015100 Sobic010G015100 Sobic010G032200--Sobic010G015100 Sobic010G032200--Sobic004G338900 Sobic010G032200--Sobic009G044200 Sobic009G237900 Sobic009G237900 Sobic010G032200--Sobic009G237900 Sobic005G072850 Sobic005G072850 Sobic010G032200--Sobic005G072850 Sobic010G032200--Sobic002G083100 Sobic003G403000--Sobic005G067200 Sobic003G403000--Sobic009G044200 Sobic003G403000--Sobic002G068701 Sobic010G200600 Sobic010G200600 Sobic003G403000--Sobic010G200600 Sobic004G289100 Sobic004G289100 Sobic003G403000--Sobic004G289100 Sobic003G403000--Sobic005G027250 Sobic009G030001 Sobic009G030001 Sobic003G403000--Sobic009G030001 Sobic004G218200 Sobic004G218200 Sobic003G403000--Sobic004G218200 Sobic004G281500 Sobic004G281500 Sobic003G403000--Sobic004G281500 Sobic002G398400 Sobic002G398400 Sobic001G345300--Sobic002G398400 Sobic008G141300 Sobic008G141300 Sobic001G345300--Sobic008G141300 Sobic004G180200 Sobic004G180200 Sobic001G345300--Sobic004G180200 Sobic001G345300--Sobic005G027250 Sobic001G345300--Sobic007G204800 Sobic001G345300--Sobic002G068701 Sobic001G345300--Sobic006G099200 Sobic001G345300--Sobic009G044200 Sobic001G345300--Sobic002G160200 Sobic004G338900--Sobic002G160200 Sobic004G338900--Sobic007G204800 Sobic004G338900--Sobic001G160900 Sobic004G338900--Sobic006G099200 Sobic004G338900--Sobic002G083100 Sobic002G102600 Sobic002G102600 Sobic004G338900--Sobic002G102600 Sobic004G338900--Sobic005G027250 Sobic005G001200 Sobic005G001200 Sobic004G338900--Sobic005G001200 Sobic003G287800 Sobic003G287800 Sobic004G338900--Sobic003G287800 Sobic005G067200--Sobic003G403000 Sobic007G136000 Sobic007G136000 Sobic005G067200--Sobic007G136000 Sobic005G067200--Sobic002G068701 Sobic005G067200--Sobic009G044200 Sobic005G067200--Sobic004G218200 Sobic005G067200--Sobic004G281500 Sobic001G407300 Sobic001G407300 Sobic005G067200--Sobic001G407300 Sobic010G279600 Sobic010G279600 Sobic005G067200--Sobic010G279600 Sobic004G200100 Sobic004G200100 Sobic005G067200--Sobic004G200100 Sobic007G204800--Sobic002G160200 Sobic007G204800--Sobic004G338900 Sobic007G204800--Sobic006G099200 Sobic007G204800--Sobic001G160900 Sobic007G204800--Sobic001G120800 Sobic007G204800--Sobic002G102600 Sobic010G257900 Sobic010G257900 Sobic007G204800--Sobic010G257900 Sobic007G204800--Sobic005G027250 Sobic007G204800--Sobic002G083100
Octagon: transcription factors


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