Gene annotation
Transcriptome id Sobic.003G403000.1,Sobic.003G403000.3,Sobic.003G403000.2
Synonym Sb03g043890, , SbMATE; multidrug and toxic compound extrusion (MATE) family, SbMATE
Functional annotation "major aluminum tolerance, s a plasma membrane anion efflux transporter responsible for citrate release into the rhizosphere" (PubMedID : 17721535)
Aluminum tolerance (PubMedID : 17721535)
MATE efflux protein, putative, expressed
UniProt A7XZS5
Pfam PF01554
Panther DB PTHR11206 PTHR11206:SF179
NCBI CDD KOG1347; Uncharacterized membrane protein, predicted efflux pump
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0015297antiporter activity GO:0006855drug transmembrane transport


Orthologs (automatic annotation)
TAIR AT1G51340 : MATE efflux family protein
RAP-DB (Rice) LOC_Os03g11734.1 : MATE efflux protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G067200 expressed protein -
2 Sobic.009G044200 C2 domain containing protein, putative, expressed -
3 Sobic.002G068701 - K00472: prolyl 4-hydroxylase
4 Sobic.010G200600 nitrate-induced NOI protein, expressed -
5 Sobic.004G289100 OsSub20 - Putative Subtilisin homologue, expressed -
6 Sobic.005G027250 - -
7 Sobic.009G030001 - -
8 Sobic.004G218200 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CPuORF40 - conserved peptide uORF-containing transcript, expressed -
9 Sobic.004G281500 fringe-related protein, putative, expressed -
10 Sobic.001G407300 expressed protein -
11 Sobic.006G099200 pollen allergen Cyn d 23, putative, expressed -
12 Sobic.005G152550 - -
13 Sobic.009G180600 CAMK_CAMK_like.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
14 Sobic.010G279600 ZOS2-19 - C2H2 zinc finger protein, expressed -
15 Sobic.010G032200 expressed protein -
16 Sobic.005G125200 OsFBX313 - F-box domain containing protein, expressed -
17 Sobic.001G152800 pollen preferential protein, putative, expressed -
18 Sobic.007G136000 - -
19 Sobic.008G141300 IBS1, putative, expressed -
20 Sobic.004G008500 - -


Gene co-expression network
sample Sobic003G403000 Sobic003G403000 Sobic005G067200 Sobic005G067200 Sobic003G403000--Sobic005G067200 Sobic009G044200 Sobic009G044200 Sobic003G403000--Sobic009G044200 Sobic002G068701 Sobic002G068701 Sobic003G403000--Sobic002G068701 Sobic010G200600 Sobic010G200600 Sobic003G403000--Sobic010G200600 Sobic004G289100 Sobic004G289100 Sobic003G403000--Sobic004G289100 Sobic005G027250 Sobic005G027250 Sobic003G403000--Sobic005G027250 Sobic009G030001 Sobic009G030001 Sobic003G403000--Sobic009G030001 Sobic004G218200 Sobic004G218200 Sobic003G403000--Sobic004G218200 Sobic004G281500 Sobic004G281500 Sobic003G403000--Sobic004G281500 Sobic005G067200--Sobic003G403000 Sobic007G136000 Sobic007G136000 Sobic005G067200--Sobic007G136000 Sobic005G067200--Sobic002G068701 Sobic005G067200--Sobic009G044200 Sobic005G067200--Sobic004G218200 Sobic005G067200--Sobic004G281500 Sobic001G407300 Sobic001G407300 Sobic005G067200--Sobic001G407300 Sobic010G279600 Sobic010G279600 Sobic005G067200--Sobic010G279600 Sobic004G200100 Sobic004G200100 Sobic005G067200--Sobic004G200100 Sobic009G044200--Sobic005G027250 Sobic006G099200 Sobic006G099200 Sobic009G044200--Sobic006G099200 Sobic004G338900 Sobic004G338900 Sobic009G044200--Sobic004G338900 Sobic005G125200 Sobic005G125200 Sobic009G044200--Sobic005G125200 Sobic002G160200 Sobic002G160200 Sobic009G044200--Sobic002G160200 Sobic007G204800 Sobic007G204800 Sobic009G044200--Sobic007G204800 Sobic001G160900 Sobic001G160900 Sobic009G044200--Sobic001G160900 Sobic002G083100 Sobic002G083100 Sobic009G044200--Sobic002G083100 Sobic010G032200 Sobic010G032200 Sobic009G044200--Sobic010G032200 Sobic002G068701--Sobic009G044200 Sobic002G068701--Sobic005G027250 Sobic002G068701--Sobic006G099200 Sobic002G068701--Sobic010G032200 Sobic002G068701--Sobic003G403000 Sobic001G345300 Sobic001G345300 Sobic002G068701--Sobic001G345300 Sobic002G068701--Sobic004G338900 Sobic002G068701--Sobic005G067200 Sobic002G068701--Sobic007G204800 Sobic002G084200 Sobic002G084200 Sobic010G200600--Sobic002G084200 Sobic003G154900 Sobic003G154900 Sobic010G200600--Sobic003G154900 Sobic002G156800 Sobic002G156800 Sobic010G200600--Sobic002G156800 Sobic010G200600--Sobic004G218200 Sobic010G200600--Sobic003G403000 Sobic010G200600--Sobic005G067200 Sobic002G221500 Sobic002G221500 Sobic010G200600--Sobic002G221500 Sobic010G200600--Sobic002G068701 Sobic002G017100 Sobic002G017100 Sobic010G200600--Sobic002G017100 Sobic001G152800 Sobic001G152800 Sobic004G289100--Sobic001G152800 Sobic007G166500 Sobic007G166500 Sobic004G289100--Sobic007G166500 Sobic003G434100 Sobic003G434100 Sobic004G289100--Sobic003G434100 Sobic002G029000 Sobic002G029000 Sobic004G289100--Sobic002G029000 Sobic004G289100--Sobic004G281500 Sobic001G445400 Sobic001G445400 Sobic004G289100--Sobic001G445400 Sobic004G008500 Sobic004G008500 Sobic004G289100--Sobic004G008500 Sobic009G072600 Sobic009G072600 Sobic004G289100--Sobic009G072600 Sobic004G289100--Sobic010G279600 Sobic005G027250--Sobic006G099200 Sobic005G027250--Sobic009G044200 Sobic005G027250--Sobic004G338900 Sobic005G027250--Sobic007G204800 Sobic005G027250--Sobic002G160200 Sobic005G027250--Sobic001G160900 Sobic005G027250--Sobic002G083100 Sobic005G027250--Sobic010G032200 Sobic005G027250--Sobic005G125200 Sobic009G030001--Sobic004G289100 Sobic009G030001--Sobic004G281500 Sobic009G030001--Sobic009G072600 Sobic005G199800 Sobic005G199800 Sobic009G030001--Sobic005G199800 Sobic009G030001--Sobic003G434100 Sobic009G030001--Sobic007G166500 Sobic009G030001--Sobic002G029000 Sobic002G323200 Sobic002G323200 Sobic009G030001--Sobic002G323200 Sobic009G030001--Sobic001G152800 Sobic004G218200--Sobic010G200600 Sobic004G218200--Sobic005G067200 Sobic004G218200--Sobic003G403000 Sobic007G195900 Sobic007G195900 Sobic004G218200--Sobic007G195900 Sobic005G152550 Sobic005G152550 Sobic004G218200--Sobic005G152550 Sobic010G037701 Sobic010G037701 Sobic004G218200--Sobic010G037701 Sobic004G218200--Sobic003G154900 Sobic004G218200--Sobic007G136000 Sobic004G218200--Sobic002G084200 Sobic004G281500--Sobic004G289100 Sobic004G281500--Sobic009G072600 Sobic004G281500--Sobic007G166500 Sobic004G281500--Sobic001G152800 Sobic004G281500--Sobic003G434100 Sobic004G281500--Sobic002G029000 Sobic004G281500--Sobic010G279600 Sobic004G281500--Sobic005G199800 Sobic004G281500--Sobic002G323200
Octagon: transcription factors


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