Gene annotation
Transcriptome id Sobic.001G407300.4
Synonym
Functional annotation expressed protein
UniProt A0A1B6QNU6
Pfam -
Panther DB PTHR10241 PTHR10241:SF25
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05570 : transducin family protein / WD-40 repeat family protein
RAP-DB (Rice) LOC_Os07g49300.1 : expressed protein
MaizeGDB (Corn) Zm00025a052671 , Zm00025a052677
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G261900 methyltransferase, putative, expressed -
2 Sobic.010G279600 ZOS2-19 - C2H2 zinc finger protein, expressed -
3 Sobic.004G289100 OsSub20 - Putative Subtilisin homologue, expressed -
4 Sobic.004G281500 fringe-related protein, putative, expressed -
5 Sobic.009G044200 C2 domain containing protein, putative, expressed -
6 Sobic.001G152800 pollen preferential protein, putative, expressed -
7 Sobic.004G008500 - -
8 Sobic.005G067200 expressed protein -
9 Sobic.003G211000 - -
10 Sobic.009G167400 KIP1, putative, expressed -
11 Sobic.002G083100 cadmium/zinc-transporting ATPase, putative, expressed K01534: Zn2+/Cd2+-exporting ATPase
12 Sobic.009G030001 - -
13 Sobic.010G063700 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
14 Sobic.002G027901 - K10523: speckle-type POZ protein
15 Sobic.003G403000 "major aluminum tolerance, s a plasma membrane anion efflux transporter responsible for citrate release into the rhizosphere"(PubMedID : 17721535)@Aluminum tolerance(PubMedID : 17721535)@MATE efflux protein, putative, expressed -
16 Sobic.007G166500 expansin precursor, putative, expressed -
17 Sobic.005G027250 - -
18 Sobic.001G445400 expressed protein -
19 Sobic.003G434100 - -
20 Sobic.010G016100 TKL_IRAK_CrRLK1L-1.13 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -


Gene co-expression network
sample Sobic001G407300 Sobic001G407300 Sobic010G261900 Sobic010G261900 Sobic001G407300--Sobic010G261900 Sobic010G279600 Sobic010G279600 Sobic001G407300--Sobic010G279600 Sobic004G289100 Sobic004G289100 Sobic001G407300--Sobic004G289100 Sobic004G281500 Sobic004G281500 Sobic001G407300--Sobic004G281500 Sobic009G044200 Sobic009G044200 Sobic001G407300--Sobic009G044200 Sobic001G152800 Sobic001G152800 Sobic001G407300--Sobic001G152800 Sobic004G008500 Sobic004G008500 Sobic001G407300--Sobic004G008500 Sobic005G067200 Sobic005G067200 Sobic001G407300--Sobic005G067200 Sobic003G211000 Sobic003G211000 Sobic001G407300--Sobic003G211000 Sobic010G261900--Sobic003G211000 Sobic002G029000 Sobic002G029000 Sobic010G261900--Sobic002G029000 Sobic010G063700 Sobic010G063700 Sobic010G261900--Sobic010G063700 Sobic007G166500 Sobic007G166500 Sobic010G261900--Sobic007G166500 Sobic010G261900--Sobic010G279600 Sobic010G261900--Sobic004G008500 Sobic003G434100 Sobic003G434100 Sobic010G261900--Sobic003G434100 Sobic004G123100 Sobic004G123100 Sobic010G261900--Sobic004G123100 Sobic007G146300 Sobic007G146300 Sobic010G261900--Sobic007G146300 Sobic010G279600--Sobic004G008500 Sobic010G279600--Sobic010G063700 Sobic010G279600--Sobic001G152800 Sobic010G279600--Sobic010G261900 Sobic010G279600--Sobic007G166500 Sobic010G016100 Sobic010G016100 Sobic010G279600--Sobic010G016100 Sobic001G445400 Sobic001G445400 Sobic010G279600--Sobic001G445400 Sobic010G279600--Sobic002G029000 Sobic010G279600--Sobic004G289100 Sobic004G289100--Sobic001G152800 Sobic004G289100--Sobic007G166500 Sobic004G289100--Sobic003G434100 Sobic004G289100--Sobic002G029000 Sobic004G289100--Sobic004G281500 Sobic004G289100--Sobic001G445400 Sobic004G289100--Sobic004G008500 Sobic009G072600 Sobic009G072600 Sobic004G289100--Sobic009G072600 Sobic004G289100--Sobic010G279600 Sobic004G281500--Sobic004G289100 Sobic004G281500--Sobic009G072600 Sobic004G281500--Sobic007G166500 Sobic004G281500--Sobic001G152800 Sobic004G281500--Sobic003G434100 Sobic004G281500--Sobic002G029000 Sobic004G281500--Sobic010G279600 Sobic005G199800 Sobic005G199800 Sobic004G281500--Sobic005G199800 Sobic002G323200 Sobic002G323200 Sobic004G281500--Sobic002G323200 Sobic005G027250 Sobic005G027250 Sobic009G044200--Sobic005G027250 Sobic006G099200 Sobic006G099200 Sobic009G044200--Sobic006G099200 Sobic004G338900 Sobic004G338900 Sobic009G044200--Sobic004G338900 Sobic005G125200 Sobic005G125200 Sobic009G044200--Sobic005G125200 Sobic002G160200 Sobic002G160200 Sobic009G044200--Sobic002G160200 Sobic007G204800 Sobic007G204800 Sobic009G044200--Sobic007G204800 Sobic001G160900 Sobic001G160900 Sobic009G044200--Sobic001G160900 Sobic002G083100 Sobic002G083100 Sobic009G044200--Sobic002G083100 Sobic010G032200 Sobic010G032200 Sobic009G044200--Sobic010G032200 Sobic001G152800--Sobic001G445400 Sobic001G152800--Sobic010G016100 Sobic001G152800--Sobic007G166500 Sobic001G152800--Sobic010G063700 Sobic008G138100 Sobic008G138100 Sobic001G152800--Sobic008G138100 Sobic001G152800--Sobic003G434100 Sobic001G152800--Sobic004G289100 Sobic001G152800--Sobic004G008500 Sobic001G152800--Sobic002G029000 Sobic004G008500--Sobic010G063700 Sobic004G008500--Sobic001G152800 Sobic004G008500--Sobic001G445400 Sobic004G008500--Sobic010G016100 Sobic004G008500--Sobic008G138100 Sobic004G008500--Sobic007G166500 Sobic004G008500--Sobic010G279600 Sobic010G140700 Sobic010G140700 Sobic004G008500--Sobic010G140700 Sobic004G008500--Sobic002G029000 Sobic003G403000 Sobic003G403000 Sobic005G067200--Sobic003G403000 Sobic007G136000 Sobic007G136000 Sobic005G067200--Sobic007G136000 Sobic002G068701 Sobic002G068701 Sobic005G067200--Sobic002G068701 Sobic005G067200--Sobic009G044200 Sobic004G218200 Sobic004G218200 Sobic005G067200--Sobic004G218200 Sobic005G067200--Sobic004G281500 Sobic005G067200--Sobic001G407300 Sobic005G067200--Sobic010G279600 Sobic004G200100 Sobic004G200100 Sobic005G067200--Sobic004G200100 Sobic009G176200 Sobic009G176200 Sobic003G211000--Sobic009G176200 Sobic003G211000--Sobic010G261900 Sobic010G187800 Sobic010G187800 Sobic003G211000--Sobic010G187800 Sobic001G513400 Sobic001G513400 Sobic003G211000--Sobic001G513400 Sobic003G061600 Sobic003G061600 Sobic003G211000--Sobic003G061600 Sobic004G185000 Sobic004G185000 Sobic003G211000--Sobic004G185000 Sobic003G211000--Sobic002G029000 Sobic002G405300 Sobic002G405300 Sobic003G211000--Sobic002G405300 Sobic009G249400 Sobic009G249400 Sobic003G211000--Sobic009G249400
Octagon: transcription factors


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