Gene annotation
Transcriptome id Sobic.002G083100.1
Synonym Sb02g006950, HMA2, ATHMA2
Functional annotation cadmium/zinc-transporting ATPase, putative, expressed
UniProt C5XDI3
Pfam PF12710 PF00122
Panther DB PTHR24093 PTHR24093:SF318
NCBI CDD -
KEGG Orthology K01534; Zn2+/Cd2+-exporting ATPase
Gene Ontology GO:0000166; nucleotide binding


Orthologs (automatic annotation)
TAIR AT4G30110 : heavy metal atpase 2
RAP-DB (Rice) LOC_Os07g12900.1 : cadmium/zinc-transporting ATPase, putative, expressed
MaizeGDB (Corn) Zm00025a045447 , Zm00025a013372 , Zm00025a013370
Brachypodium KQK20301
Barley HORVU5Hr1G094430.17 , HORVU5Hr1G094430.16 , HORVU5Hr1G094430.15 , HORVU5Hr1G094430.14 , HORVU5Hr1G094430.13 , HORVU5Hr1G094430.12 , HORVU5Hr1G094430.10 , HORVU5Hr1G094430.19 , HORVU5Hr1G094430.18 , HORVU5Hr1G094430.7 , HORVU5Hr1G094430.6 , HORVU5Hr1G094430.5 , HORVU5Hr1G094430.4 , HORVU5Hr1G094430.3 , HORVU5Hr1G094430.2 , HORVU5Hr1G094430.9 , HORVU5Hr1G094430.8 , HORVU7Hr1G097210.14 , HORVU7Hr1G097210.15 , HORVU7Hr1G097210.12 , HORVU7Hr1G097210.13 , HORVU7Hr1G097210.10 , HORVU7Hr1G097210.11 , HORVU7Hr1G097210.8 , HORVU7Hr1G097210.9 , HORVU7Hr1G097210.6 , HORVU7Hr1G097210.7 , HORVU7Hr1G097210.4 , HORVU7Hr1G097210.5 , HORVU7Hr1G097210.1 , HORVU7Hr1G097210.2 , HORVU7Hr1G097210.3 , HORVU5Hr1G094430.28 , HORVU5Hr1G094430.29 , HORVU5Hr1G094430.26 , HORVU5Hr1G094430.27 , HORVU5Hr1G094430.24 , HORVU5Hr1G094430.25 , HORVU5Hr1G094430.22 , HORVU5Hr1G094430.23 , HORVU5Hr1G094430.20 , HORVU5Hr1G094430.21
Wheat TraesCS5B02G388000 , TraesCS5D02G392700 , TraesCS5A02G383400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G338900 P21-Rho-binding domain containing protein, putative, expressed -
2 Sobic.002G160200 expressed protein -
3 Sobic.007G204800 receptor-like protein kinase 1, putative, expressed -
4 Sobic.002G102600 - -
5 Sobic.005G001200 - -
6 Sobic.006G099200 pollen allergen Cyn d 23, putative, expressed -
7 Sobic.001G160900 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
8 Sobic.005G027250 - -
9 Sobic.003G287800 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
10 Sobic.010G126300 - -
11 Sobic.005G098100 - -
12 Sobic.003G400700 CAMK_CAMK_like.39 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
13 Sobic.008G129800 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
14 Sobic.001G120800 - -
15 Sobic.010G257900 peptidyl-prolyl cis-trans isomerase, putative, expressed -
16 Sobic.008G131300 pectinesterase, putative, expressed K01051: pectinesterase
17 Sobic.002G322500 similar to Putative uncharacterized protein(PubMedID : 29862293)@harpin-induced protein 1 domain containing protein, expressed -
18 Sobic.006G037100 expressed protein -
19 Sobic.004G264100 ATCHX15, putative, expressed -
20 Sobic.001G433500 expressed protein -


Gene co-expression network
sample Sobic002G083100 Sobic002G083100 Sobic004G338900 Sobic004G338900 Sobic002G083100--Sobic004G338900 Sobic002G160200 Sobic002G160200 Sobic002G083100--Sobic002G160200 Sobic007G204800 Sobic007G204800 Sobic002G083100--Sobic007G204800 Sobic002G102600 Sobic002G102600 Sobic002G083100--Sobic002G102600 Sobic005G001200 Sobic005G001200 Sobic002G083100--Sobic005G001200 Sobic006G099200 Sobic006G099200 Sobic002G083100--Sobic006G099200 Sobic001G160900 Sobic001G160900 Sobic002G083100--Sobic001G160900 Sobic005G027250 Sobic005G027250 Sobic002G083100--Sobic005G027250 Sobic003G287800 Sobic003G287800 Sobic002G083100--Sobic003G287800 Sobic004G338900--Sobic002G160200 Sobic004G338900--Sobic007G204800 Sobic004G338900--Sobic001G160900 Sobic004G338900--Sobic006G099200 Sobic004G338900--Sobic002G083100 Sobic004G338900--Sobic002G102600 Sobic004G338900--Sobic005G027250 Sobic004G338900--Sobic005G001200 Sobic004G338900--Sobic003G287800 Sobic002G160200--Sobic002G102600 Sobic002G160200--Sobic007G204800 Sobic002G160200--Sobic004G338900 Sobic005G098100 Sobic005G098100 Sobic002G160200--Sobic005G098100 Sobic003G400700 Sobic003G400700 Sobic002G160200--Sobic003G400700 Sobic002G160200--Sobic001G160900 Sobic002G160200--Sobic005G001200 Sobic006G037100 Sobic006G037100 Sobic002G160200--Sobic006G037100 Sobic008G129800 Sobic008G129800 Sobic002G160200--Sobic008G129800 Sobic007G204800--Sobic002G160200 Sobic007G204800--Sobic004G338900 Sobic007G204800--Sobic006G099200 Sobic007G204800--Sobic001G160900 Sobic001G120800 Sobic001G120800 Sobic007G204800--Sobic001G120800 Sobic007G204800--Sobic002G102600 Sobic010G257900 Sobic010G257900 Sobic007G204800--Sobic010G257900 Sobic007G204800--Sobic005G027250 Sobic007G204800--Sobic002G083100 Sobic002G102600--Sobic005G098100 Sobic002G102600--Sobic002G160200 Sobic002G102600--Sobic003G400700 Sobic001G433500 Sobic001G433500 Sobic002G102600--Sobic001G433500 Sobic002G102600--Sobic006G037100 Sobic002G102600--Sobic005G001200 Sobic002G102600--Sobic003G287800 Sobic003G131900 Sobic003G131900 Sobic002G102600--Sobic003G131900 Sobic002G102600--Sobic007G204800 Sobic010G126300 Sobic010G126300 Sobic005G001200--Sobic010G126300 Sobic005G001200--Sobic003G287800 Sobic005G001200--Sobic002G102600 Sobic005G001200--Sobic005G098100 Sobic005G001200--Sobic003G400700 Sobic002G322500 Sobic002G322500 Sobic005G001200--Sobic002G322500 Sobic005G001200--Sobic001G433500 Sobic005G001200--Sobic006G037100 Sobic005G001200--Sobic002G160200 Sobic006G099200--Sobic005G027250 Sobic006G099200--Sobic007G204800 Sobic006G099200--Sobic004G338900 Sobic009G044200 Sobic009G044200 Sobic006G099200--Sobic009G044200 Sobic006G099200--Sobic001G160900 Sobic010G032200 Sobic010G032200 Sobic006G099200--Sobic010G032200 Sobic006G099200--Sobic002G160200 Sobic006G099200--Sobic002G083100 Sobic006G099200--Sobic001G120800 Sobic001G160900--Sobic007G204800 Sobic001G160900--Sobic002G160200 Sobic001G160900--Sobic004G338900 Sobic001G160900--Sobic002G102600 Sobic005G125200 Sobic005G125200 Sobic001G160900--Sobic005G125200 Sobic001G160900--Sobic006G099200 Sobic003G192200 Sobic003G192200 Sobic001G160900--Sobic003G192200 Sobic001G160900--Sobic001G120800 Sobic001G160900--Sobic010G257900 Sobic005G027250--Sobic006G099200 Sobic005G027250--Sobic009G044200 Sobic005G027250--Sobic004G338900 Sobic005G027250--Sobic007G204800 Sobic005G027250--Sobic002G160200 Sobic005G027250--Sobic001G160900 Sobic005G027250--Sobic002G083100 Sobic005G027250--Sobic010G032200 Sobic005G027250--Sobic005G125200 Sobic003G287800--Sobic010G126300 Sobic003G287800--Sobic005G001200 Sobic003G287800--Sobic002G322500 Sobic003G287800--Sobic003G400700 Sobic003G287800--Sobic006G037100 Sobic003G287800--Sobic005G098100 Sobic003G287800--Sobic001G433500 Sobic003G287800--Sobic002G102600 Sobic003G166001 Sobic003G166001 Sobic003G287800--Sobic003G166001
Octagon: transcription factors


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