Gene annotation
Transcriptome id Sobic.003G400700.1
Synonym Sb03g043700, ATCPK32, CPK32, CDPK32
Functional annotation CAMK_CAMK_like.39 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5XG72
Pfam PF07714 PF13499
Panther DB PTHR24349 PTHR24349:SF127
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology K13412; calcium-dependent protein kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G57530 : calcium-dependent protein kinase 32
RAP-DB (Rice) LOC_Os09g33910.1 : CAMK_CAMK_like.39 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a043932 , Zm00025a032358 , Zm00025a037757 , Zm00025a047650 , Zm00025a033617 , Zm00025a014340 , Zm00025a016501 , Zm00025a048434 , Zm00025a008681
Brachypodium KQK12547 , KQK10428 , KQK15660 , KQJ89241 , KQK05824 , PNT73937 , KQJ91002 , PNT64929 , PNT64928 , KQK15659
Barley HORVU1Hr1G070840.3 , HORVU1Hr1G070840.4 , HORVU7Hr1G056060.1 , HORVU7Hr1G056060.3 , HORVU7Hr1G056060.5 , HORVU7Hr1G056060.2 , HORVU7Hr1G056060.12 , HORVU7Hr1G056060.10 , HORVU7Hr1G056060.11 , HORVU1Hr1G070840.2 , HORVU1Hr1G070840.1 , HORVU7Hr1G056060.8 , HORVU7Hr1G056060.9 , HORVU7Hr1G056060.4 , HORVU7Hr1G056060.6 , HORVU7Hr1G056060.7 , HORVU3Hr1G087600.7 , HORVU3Hr1G087600.2 , HORVU3Hr1G087600.3 , HORVU3Hr1G087600.1 , HORVU3Hr1G087600.8
Wheat TraesCS3A02G351300 , TraesCS1D02G290700 , TraesCS1A02G292200 , TraesCS1A02G292200 , TraesCS7B02G165200 , TraesCS2B02G227000 , TraesCS1B02G301600 , TraesCS5D02G475900 , TraesCS5D02G475900 , TraesCS3D02G345500 , TraesCS7A02G267000 , TraesCS4D02G107200 , TraesCS2D02G207400 , TraesCS5A02G463100 , TraesCS5B02G474500 , TraesCS4B02G109800 , TraesCS4B02G109800 , TraesCS3B02G383800 , TraesCS2A02G199700 , TraesCS7D02G267700
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.003G400700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G433500 expressed protein -
2 Sobic.006G037100 expressed protein -
3 Sobic.005G098100 - -
4 Sobic.003G166001 - -
5 Sobic.008G080700 CAMK_CAMK_like.46 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
6 Sobic.006G098900 pollen allergen Cyn d 23, putative, expressed -
7 Sobic.002G102600 - -
8 Sobic.008G131300 pectinesterase, putative, expressed K01051: pectinesterase
9 Sobic.002G122500 P21-Rho-binding domain containing protein, putative, expressed -
10 Sobic.003G287800 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
11 Sobic.002G305800 expansin precursor, putative, expressed -
12 Sobic.002G322500 similar to Putative uncharacterized protein(PubMedID : 29862293)@harpin-induced protein 1 domain containing protein, expressed -
13 Sobic.008G129800 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
14 Sobic.004G163900 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
15 Sobic.005G001200 - -
16 Sobic.002G160200 expressed protein -
17 Sobic.004G264100 ATCHX15, putative, expressed -
18 Sobic.004G079600 - -
19 Sobic.010G126300 - -
20 Sobic.004G080600 protein with a conserved N-terminal region, putative, expressed -


Gene co-expression network
sample Sobic003G400700 Sobic003G400700 Sobic001G433500 Sobic001G433500 Sobic003G400700--Sobic001G433500 Sobic006G037100 Sobic006G037100 Sobic003G400700--Sobic006G037100 Sobic005G098100 Sobic005G098100 Sobic003G400700--Sobic005G098100 Sobic003G166001 Sobic003G166001 Sobic003G400700--Sobic003G166001 Sobic008G080700 Sobic008G080700 Sobic003G400700--Sobic008G080700 Sobic006G098900 Sobic006G098900 Sobic003G400700--Sobic006G098900 Sobic002G102600 Sobic002G102600 Sobic003G400700--Sobic002G102600 Sobic008G131300 Sobic008G131300 Sobic003G400700--Sobic008G131300 Sobic002G122500 Sobic002G122500 Sobic003G400700--Sobic002G122500 Sobic001G433500--Sobic003G400700 Sobic001G433500--Sobic006G037100 Sobic001G433500--Sobic003G166001 Sobic001G433500--Sobic005G098100 Sobic001G433500--Sobic006G098900 Sobic001G433500--Sobic008G080700 Sobic001G433500--Sobic002G102600 Sobic001G433500--Sobic008G131300 Sobic003G287800 Sobic003G287800 Sobic001G433500--Sobic003G287800 Sobic006G037100--Sobic003G400700 Sobic006G037100--Sobic001G433500 Sobic006G037100--Sobic003G166001 Sobic006G037100--Sobic008G080700 Sobic006G037100--Sobic005G098100 Sobic006G037100--Sobic006G098900 Sobic006G037100--Sobic008G131300 Sobic006G037100--Sobic002G122500 Sobic002G305800 Sobic002G305800 Sobic006G037100--Sobic002G305800 Sobic005G098100--Sobic003G400700 Sobic005G098100--Sobic001G433500 Sobic005G098100--Sobic002G102600 Sobic005G098100--Sobic006G037100 Sobic005G098100--Sobic003G166001 Sobic005G098100--Sobic006G098900 Sobic005G098100--Sobic003G287800 Sobic005G098100--Sobic008G080700 Sobic005G098100--Sobic008G131300 Sobic003G166001--Sobic006G037100 Sobic003G166001--Sobic008G080700 Sobic003G166001--Sobic001G433500 Sobic003G166001--Sobic003G400700 Sobic003G166001--Sobic006G098900 Sobic003G166001--Sobic002G305800 Sobic003G166001--Sobic008G131300 Sobic003G166001--Sobic005G098100 Sobic007G051200 Sobic007G051200 Sobic003G166001--Sobic007G051200 Sobic008G080700--Sobic002G305800 Sobic008G080700--Sobic003G166001 Sobic008G080700--Sobic006G037100 Sobic008G080700--Sobic002G122500 Sobic004G080600 Sobic004G080600 Sobic008G080700--Sobic004G080600 Sobic008G080700--Sobic008G131300 Sobic004G163900 Sobic004G163900 Sobic008G080700--Sobic004G163900 Sobic008G080700--Sobic006G098900 Sobic008G080700--Sobic003G400700 Sobic006G098900--Sobic003G166001 Sobic006G098900--Sobic006G037100 Sobic006G098900--Sobic008G080700 Sobic006G098900--Sobic001G433500 Sobic006G098900--Sobic003G400700 Sobic006G098900--Sobic002G305800 Sobic006G098900--Sobic008G131300 Sobic006G098900--Sobic005G098100 Sobic004G079600 Sobic004G079600 Sobic006G098900--Sobic004G079600 Sobic002G102600--Sobic005G098100 Sobic002G160200 Sobic002G160200 Sobic002G102600--Sobic002G160200 Sobic002G102600--Sobic003G400700 Sobic002G102600--Sobic001G433500 Sobic002G102600--Sobic006G037100 Sobic005G001200 Sobic005G001200 Sobic002G102600--Sobic005G001200 Sobic002G102600--Sobic003G287800 Sobic003G131900 Sobic003G131900 Sobic002G102600--Sobic003G131900 Sobic007G204800 Sobic007G204800 Sobic002G102600--Sobic007G204800 Sobic008G131300--Sobic002G122500 Sobic008G131300--Sobic008G080700 Sobic008G131300--Sobic006G037100 Sobic008G129800 Sobic008G129800 Sobic008G131300--Sobic008G129800 Sobic008G131300--Sobic002G305800 Sobic008G131300--Sobic004G163900 Sobic008G131300--Sobic003G166001 Sobic008G131300--Sobic003G400700 Sobic003G322000 Sobic003G322000 Sobic008G131300--Sobic003G322000 Sobic002G122500--Sobic004G163900 Sobic002G122500--Sobic003G322000 Sobic002G122500--Sobic008G129800 Sobic002G122500--Sobic002G305800 Sobic002G122500--Sobic008G080700 Sobic002G122500--Sobic008G131300 Sobic002G122500--Sobic006G037100 Sobic002G122500--Sobic004G080600 Sobic002G122500--Sobic007G051200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.