Gene annotation
Transcriptome id Sobic.004G163900.1
Synonym SNP33, ATSNAP33, SNAP33, ATSNAP33B, Sb04g021560
Functional annotation SNARE domain containing protein, putative, expressed
UniProt C5XTD7
Pfam PF12352
Panther DB PTHR19305 PTHR19305:SF7
NCBI CDD KOG3065; SNAP-25 (synaptosome-associated protein) component of SNARE complex
KEGG Orthology K18211; synaptosomal-associated protein 25
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G61210 : soluble N-ethylmaleimide-sensitive factor adaptor protein 33
RAP-DB (Rice) LOC_Os02g32740.1 : SNARE domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a020528
Brachypodium KQJ94564
Barley HORVU3Hr1G088590.7 , HORVU3Hr1G088590.6 , HORVU3Hr1G088590.5 , HORVU3Hr1G088590.4 , HORVU3Hr1G088590.3 , HORVU3Hr1G088590.2 , HORVU3Hr1G088590.1
Wheat TraesCS3D02G384300 , TraesCS3A02G391300 , TraesCS3B02G423500
Populus -


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cDNA sequences
Sobic.004G163900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G122500 P21-Rho-binding domain containing protein, putative, expressed -
2 Sobic.003G322000 tyrosine protein kinase domain containing protein, putative, expressed -
3 Sobic.008G129800 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
4 Sobic.002G305800 expansin precursor, putative, expressed -
5 Sobic.008G080700 CAMK_CAMK_like.46 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
6 Sobic.008G131300 pectinesterase, putative, expressed K01051: pectinesterase
7 Sobic.006G037100 expressed protein -
8 Sobic.007G051200 cytidylyltransferase domain containing protein, expressed K00968: choline-phosphate cytidylyltransferase
9 Sobic.004G080600 protein with a conserved N-terminal region, putative, expressed -
10 Sobic.006G251100 powdery mildew resistant protein 5, putative, expressed -
11 Sobic.002G236800 - -
12 Sobic.003G166001 - -
13 Sobic.003G400700 CAMK_CAMK_like.39 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
14 Sobic.010G070100 serine threonine kinase, putative, expressed -
15 Sobic.003G193600 expressed protein -
16 Sobic.001G433500 expressed protein -
17 Sobic.003G226400 similar to Late embryogenesis-abundant protein Lea14-A-like(PubMedID : 29862293)@late embryogenesis abundant protein, putative, expressed -
18 Sobic.010G140700 peroxidase precursor, putative, expressed -
19 Sobic.006G098900 pollen allergen Cyn d 23, putative, expressed -
20 Sobic.004G078750 - -


Gene co-expression network
sample Sobic004G163900 Sobic004G163900 Sobic002G122500 Sobic002G122500 Sobic004G163900--Sobic002G122500 Sobic003G322000 Sobic003G322000 Sobic004G163900--Sobic003G322000 Sobic008G129800 Sobic008G129800 Sobic004G163900--Sobic008G129800 Sobic002G305800 Sobic002G305800 Sobic004G163900--Sobic002G305800 Sobic008G080700 Sobic008G080700 Sobic004G163900--Sobic008G080700 Sobic008G131300 Sobic008G131300 Sobic004G163900--Sobic008G131300 Sobic006G037100 Sobic006G037100 Sobic004G163900--Sobic006G037100 Sobic007G051200 Sobic007G051200 Sobic004G163900--Sobic007G051200 Sobic004G080600 Sobic004G080600 Sobic004G163900--Sobic004G080600 Sobic002G122500--Sobic004G163900 Sobic002G122500--Sobic003G322000 Sobic002G122500--Sobic008G129800 Sobic002G122500--Sobic002G305800 Sobic002G122500--Sobic008G080700 Sobic002G122500--Sobic008G131300 Sobic002G122500--Sobic006G037100 Sobic002G122500--Sobic004G080600 Sobic002G122500--Sobic007G051200 Sobic003G322000--Sobic004G163900 Sobic003G322000--Sobic002G122500 Sobic003G322000--Sobic008G129800 Sobic003G322000--Sobic002G305800 Sobic003G322000--Sobic008G131300 Sobic003G322000--Sobic008G080700 Sobic008G138100 Sobic008G138100 Sobic003G322000--Sobic008G138100 Sobic010G140700 Sobic010G140700 Sobic003G322000--Sobic010G140700 Sobic002G236800 Sobic002G236800 Sobic003G322000--Sobic002G236800 Sobic008G129800--Sobic002G122500 Sobic008G129800--Sobic004G163900 Sobic008G129800--Sobic003G322000 Sobic008G129800--Sobic008G131300 Sobic008G129800--Sobic002G305800 Sobic008G129800--Sobic008G080700 Sobic008G129800--Sobic006G037100 Sobic003G193600 Sobic003G193600 Sobic008G129800--Sobic003G193600 Sobic008G129800--Sobic007G051200 Sobic002G305800--Sobic008G080700 Sobic002G305800--Sobic002G122500 Sobic002G305800--Sobic004G080600 Sobic006G251100 Sobic006G251100 Sobic002G305800--Sobic006G251100 Sobic002G305800--Sobic004G163900 Sobic002G305800--Sobic007G051200 Sobic002G305800--Sobic002G236800 Sobic002G305800--Sobic008G131300 Sobic003G166001 Sobic003G166001 Sobic002G305800--Sobic003G166001 Sobic008G080700--Sobic002G305800 Sobic008G080700--Sobic003G166001 Sobic008G080700--Sobic006G037100 Sobic008G080700--Sobic002G122500 Sobic008G080700--Sobic004G080600 Sobic008G080700--Sobic008G131300 Sobic008G080700--Sobic004G163900 Sobic006G098900 Sobic006G098900 Sobic008G080700--Sobic006G098900 Sobic003G400700 Sobic003G400700 Sobic008G080700--Sobic003G400700 Sobic008G131300--Sobic002G122500 Sobic008G131300--Sobic008G080700 Sobic008G131300--Sobic006G037100 Sobic008G131300--Sobic008G129800 Sobic008G131300--Sobic002G305800 Sobic008G131300--Sobic004G163900 Sobic008G131300--Sobic003G166001 Sobic008G131300--Sobic003G400700 Sobic008G131300--Sobic003G322000 Sobic006G037100--Sobic003G400700 Sobic001G433500 Sobic001G433500 Sobic006G037100--Sobic001G433500 Sobic006G037100--Sobic003G166001 Sobic006G037100--Sobic008G080700 Sobic005G098100 Sobic005G098100 Sobic006G037100--Sobic005G098100 Sobic006G037100--Sobic006G098900 Sobic006G037100--Sobic008G131300 Sobic006G037100--Sobic002G122500 Sobic006G037100--Sobic002G305800 Sobic007G051200--Sobic006G251100 Sobic007G051200--Sobic002G305800 Sobic007G051200--Sobic008G080700 Sobic007G051200--Sobic002G236800 Sobic007G051200--Sobic004G080600 Sobic003G226400 Sobic003G226400 Sobic007G051200--Sobic003G226400 Sobic004G078750 Sobic004G078750 Sobic007G051200--Sobic004G078750 Sobic002G100766 Sobic002G100766 Sobic007G051200--Sobic002G100766 Sobic007G051200--Sobic002G122500 Sobic004G080600--Sobic002G305800 Sobic004G080600--Sobic008G080700 Sobic004G080600--Sobic006G251100 Sobic004G080600--Sobic002G236800 Sobic004G080600--Sobic003G226400 Sobic004G080600--Sobic004G078750 Sobic004G080600--Sobic007G051200 Sobic004G080600--Sobic002G100766 Sobic004G080600--Sobic002G122500
Octagon: transcription factors


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