Gene annotation
Transcriptome id Sobic.004G080600.1,Sobic.004G080600.2,Sobic.004G080600.3
Synonym Sb04g006660
Functional annotation protein with a conserved N-terminal region, putative, expressed
UniProt A0A194YND5 , A0A1Z5RLF1 , A0A194YNA9
Pfam PF12695
Panther DB PTHR12277 PTHR12277:SF80
NCBI CDD KOG1552; Predicted alpha/beta hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G17150 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g10440.1 : protein with a conserved N-terminal region, putative, expressed
MaizeGDB (Corn) Zm00025a019599
Brachypodium KQJ93877 , KQJ93878
Barley HORVU6Hr1G033070.4 , HORVU6Hr1G033070.20 , HORVU6Hr1G033070.2 , HORVU6Hr1G033070.1 , HORVU6Hr1G033070.26 , HORVU6Hr1G033070.27 , HORVU6Hr1G033070.24 , HORVU6Hr1G033070.25 , HORVU6Hr1G033070.22 , HORVU6Hr1G033070.23 , HORVU6Hr1G033070.21 , HORVU6Hr1G033070.9 , HORVU6Hr1G033070.8 , HORVU6Hr1G033070.7 , HORVU6Hr1G033070.6 , HORVU6Hr1G033070.5 , HORVU6Hr1G033070.17 , HORVU6Hr1G033070.16 , HORVU6Hr1G033070.15 , HORVU6Hr1G033070.14 , HORVU6Hr1G033070.13 , HORVU6Hr1G033070.12 , HORVU6Hr1G033070.11 , HORVU6Hr1G033070.10 , HORVU6Hr1G033070.3 , HORVU6Hr1G033070.19 , HORVU6Hr1G033070.18
Wheat TraesCS7D02G378700 , TraesCS6B02G191100 , TraesCS6D02G152400 , TraesCS6A02G160300 , TraesCS6A02G160300 , TraesCS7B02G285000 , TraesCS7B02G285000 , TraesCS7B02G285000 , TraesCS6B02G191100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G305800 expansin precursor, putative, expressed -
2 Sobic.008G080700 CAMK_CAMK_like.46 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
3 Sobic.006G251100 powdery mildew resistant protein 5, putative, expressed -
4 Sobic.002G236800 - -
5 Sobic.003G226400 similar to Late embryogenesis-abundant protein Lea14-A-like(PubMedID : 29862293)@late embryogenesis abundant protein, putative, expressed -
6 Sobic.004G078750 - -
7 Sobic.007G051200 cytidylyltransferase domain containing protein, expressed K00968: choline-phosphate cytidylyltransferase
8 Sobic.002G100766 - -
9 Sobic.002G122500 P21-Rho-binding domain containing protein, putative, expressed -
10 Sobic.004G163900 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
11 Sobic.003G166001 - -
12 Sobic.003G379100 expressed protein -
13 Sobic.001G249100 expressed protein -
14 Sobic.008G190300 pollen allergen Cyn d 23, putative, expressed -
15 Sobic.006G037100 expressed protein -
16 Sobic.003G322000 tyrosine protein kinase domain containing protein, putative, expressed -
17 Sobic.009G089800 reticulon domain containing protein, putative, expressed -
18 Sobic.001G257400 mps one binder kinase activator-like 1A, putative, expressed K06685: MOB1, MOB kinase activator 1
19 Sobic.008G131300 pectinesterase, putative, expressed K01051: pectinesterase
20 Sobic.006G098900 pollen allergen Cyn d 23, putative, expressed -


Gene co-expression network
sample Sobic004G080600 Sobic004G080600 Sobic002G305800 Sobic002G305800 Sobic004G080600--Sobic002G305800 Sobic008G080700 Sobic008G080700 Sobic004G080600--Sobic008G080700 Sobic006G251100 Sobic006G251100 Sobic004G080600--Sobic006G251100 Sobic002G236800 Sobic002G236800 Sobic004G080600--Sobic002G236800 Sobic003G226400 Sobic003G226400 Sobic004G080600--Sobic003G226400 Sobic004G078750 Sobic004G078750 Sobic004G080600--Sobic004G078750 Sobic007G051200 Sobic007G051200 Sobic004G080600--Sobic007G051200 Sobic002G100766 Sobic002G100766 Sobic004G080600--Sobic002G100766 Sobic002G122500 Sobic002G122500 Sobic004G080600--Sobic002G122500 Sobic002G305800--Sobic008G080700 Sobic002G305800--Sobic002G122500 Sobic002G305800--Sobic004G080600 Sobic002G305800--Sobic006G251100 Sobic004G163900 Sobic004G163900 Sobic002G305800--Sobic004G163900 Sobic002G305800--Sobic007G051200 Sobic002G305800--Sobic002G236800 Sobic008G131300 Sobic008G131300 Sobic002G305800--Sobic008G131300 Sobic003G166001 Sobic003G166001 Sobic002G305800--Sobic003G166001 Sobic008G080700--Sobic002G305800 Sobic008G080700--Sobic003G166001 Sobic006G037100 Sobic006G037100 Sobic008G080700--Sobic006G037100 Sobic008G080700--Sobic002G122500 Sobic008G080700--Sobic004G080600 Sobic008G080700--Sobic008G131300 Sobic008G080700--Sobic004G163900 Sobic006G098900 Sobic006G098900 Sobic008G080700--Sobic006G098900 Sobic003G400700 Sobic003G400700 Sobic008G080700--Sobic003G400700 Sobic006G251100--Sobic007G051200 Sobic006G251100--Sobic002G305800 Sobic006G251100--Sobic002G236800 Sobic006G251100--Sobic003G226400 Sobic006G251100--Sobic004G078750 Sobic006G251100--Sobic004G080600 Sobic006G251100--Sobic002G100766 Sobic006G251100--Sobic008G080700 Sobic003G379100 Sobic003G379100 Sobic006G251100--Sobic003G379100 Sobic002G236800--Sobic004G078750 Sobic002G236800--Sobic002G100766 Sobic002G236800--Sobic003G226400 Sobic002G236800--Sobic003G379100 Sobic001G249100 Sobic001G249100 Sobic002G236800--Sobic001G249100 Sobic008G190300 Sobic008G190300 Sobic002G236800--Sobic008G190300 Sobic009G089800 Sobic009G089800 Sobic002G236800--Sobic009G089800 Sobic002G006700 Sobic002G006700 Sobic002G236800--Sobic002G006700 Sobic002G236800--Sobic006G251100 Sobic003G226400--Sobic004G078750 Sobic003G226400--Sobic002G100766 Sobic003G226400--Sobic002G236800 Sobic003G226400--Sobic003G379100 Sobic003G226400--Sobic008G190300 Sobic003G226400--Sobic009G089800 Sobic003G226400--Sobic001G249100 Sobic002G165900 Sobic002G165900 Sobic003G226400--Sobic002G165900 Sobic003G226400--Sobic002G006700 Sobic004G078750--Sobic002G100766 Sobic004G078750--Sobic003G226400 Sobic004G078750--Sobic002G236800 Sobic004G078750--Sobic008G190300 Sobic004G078750--Sobic003G379100 Sobic004G078750--Sobic009G089800 Sobic004G078750--Sobic001G249100 Sobic004G078750--Sobic002G165900 Sobic004G078750--Sobic002G006700 Sobic007G051200--Sobic006G251100 Sobic007G051200--Sobic002G305800 Sobic007G051200--Sobic008G080700 Sobic007G051200--Sobic002G236800 Sobic007G051200--Sobic004G080600 Sobic007G051200--Sobic003G226400 Sobic007G051200--Sobic004G078750 Sobic007G051200--Sobic002G100766 Sobic007G051200--Sobic002G122500 Sobic002G100766--Sobic004G078750 Sobic002G100766--Sobic003G226400 Sobic002G100766--Sobic008G190300 Sobic002G100766--Sobic002G236800 Sobic002G100766--Sobic003G379100 Sobic002G100766--Sobic009G089800 Sobic002G100766--Sobic001G249100 Sobic002G100766--Sobic002G165900 Sobic002G100766--Sobic002G006700 Sobic002G122500--Sobic004G163900 Sobic003G322000 Sobic003G322000 Sobic002G122500--Sobic003G322000 Sobic008G129800 Sobic008G129800 Sobic002G122500--Sobic008G129800 Sobic002G122500--Sobic002G305800 Sobic002G122500--Sobic008G080700 Sobic002G122500--Sobic008G131300 Sobic002G122500--Sobic006G037100 Sobic002G122500--Sobic004G080600 Sobic002G122500--Sobic007G051200
Octagon: transcription factors


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