Gene annotation
Transcriptome id Sobic.003G144100.1
Synonym
Functional annotation -
UniProt A0A1B6Q362
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G218200 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CPuORF40 - conserved peptide uORF-containing transcript, expressed -
2 Sobic.007G195900 expressed protein -
3 Sobic.005G152550 - -
4 Sobic.003G154900 - -
5 Sobic.010G200600 nitrate-induced NOI protein, expressed -
6 Sobic.010G037701 - -
7 Sobic.002G084200 - -
8 Sobic.008G181701 - -
9 Sobic.002G156800 expressed protein -
10 Sobic.001G021100 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
11 Sobic.003G403000 "major aluminum tolerance, s a plasma membrane anion efflux transporter responsible for citrate release into the rhizosphere"(PubMedID : 17721535)@Aluminum tolerance(PubMedID : 17721535)@MATE efflux protein, putative, expressed -
12 Sobic.009G021050 - -
13 Sobic.007G139850 - -
14 Sobic.005G214900 cytochrome P450, putative, expressed -
15 Sobic.K044420 - -
16 Sobic.001G407300 expressed protein -
17 Sobic.005G067200 expressed protein -
18 Sobic.004G150901 - -
19 Sobic.002G017100 OsFBL33 - F-box domain and LRR containing protein, expressed -
20 Sobic.008G084000 - -


Gene co-expression network
sample Sobic003G144100 Sobic003G144100 Sobic004G218200 Sobic004G218200 Sobic003G144100--Sobic004G218200 Sobic007G195900 Sobic007G195900 Sobic003G144100--Sobic007G195900 Sobic005G152550 Sobic005G152550 Sobic003G144100--Sobic005G152550 Sobic003G154900 Sobic003G154900 Sobic003G144100--Sobic003G154900 Sobic010G200600 Sobic010G200600 Sobic003G144100--Sobic010G200600 Sobic010G037701 Sobic010G037701 Sobic003G144100--Sobic010G037701 Sobic002G084200 Sobic002G084200 Sobic003G144100--Sobic002G084200 Sobic008G181701 Sobic008G181701 Sobic003G144100--Sobic008G181701 Sobic002G156800 Sobic002G156800 Sobic003G144100--Sobic002G156800 Sobic004G218200--Sobic010G200600 Sobic005G067200 Sobic005G067200 Sobic004G218200--Sobic005G067200 Sobic003G403000 Sobic003G403000 Sobic004G218200--Sobic003G403000 Sobic004G218200--Sobic007G195900 Sobic004G218200--Sobic005G152550 Sobic004G218200--Sobic010G037701 Sobic004G218200--Sobic003G154900 Sobic007G136000 Sobic007G136000 Sobic004G218200--Sobic007G136000 Sobic004G218200--Sobic002G084200 Sobic007G195900--Sobic010G037701 Sobic007G195900--Sobic004G218200 Sobic003G074300 Sobic003G074300 Sobic007G195900--Sobic003G074300 Sobic007G195900--Sobic003G144100 Sobic001G407300 Sobic001G407300 Sobic007G195900--Sobic001G407300 Sobic007G195900--Sobic005G067200 Sobic003G106800 Sobic003G106800 Sobic007G195900--Sobic003G106800 Sobic001G330775 Sobic001G330775 Sobic007G195900--Sobic001G330775 Sobic001G057900 Sobic001G057900 Sobic007G195900--Sobic001G057900 Sobic007G139850 Sobic007G139850 Sobic005G152550--Sobic007G139850 Sobic009G021050 Sobic009G021050 Sobic005G152550--Sobic009G021050 Sobic004G150901 Sobic004G150901 Sobic005G152550--Sobic004G150901 Sobic008G084000 Sobic008G084000 Sobic005G152550--Sobic008G084000 Sobic010G138600 Sobic010G138600 Sobic005G152550--Sobic010G138600 Sobic009G253600 Sobic009G253600 Sobic005G152550--Sobic009G253600 Sobic005G152550--Sobic008G181701 Sobic005G152550--Sobic003G403000 Sobic008G074200 Sobic008G074200 Sobic005G152550--Sobic008G074200 Sobic003G154900--Sobic002G156800 Sobic003G154900--Sobic002G084200 Sobic003G154900--Sobic010G200600 Sobic002G017100 Sobic002G017100 Sobic003G154900--Sobic002G017100 Sobic002G221500 Sobic002G221500 Sobic003G154900--Sobic002G221500 Sobic003G154900--Sobic004G218200 Sobic003G154900--Sobic003G403000 Sobic003G411500 Sobic003G411500 Sobic003G154900--Sobic003G411500 Sobic009G258700 Sobic009G258700 Sobic003G154900--Sobic009G258700 Sobic010G200600--Sobic002G084200 Sobic010G200600--Sobic003G154900 Sobic010G200600--Sobic002G156800 Sobic010G200600--Sobic004G218200 Sobic010G200600--Sobic003G403000 Sobic010G200600--Sobic005G067200 Sobic010G200600--Sobic002G221500 Sobic002G068701 Sobic002G068701 Sobic010G200600--Sobic002G068701 Sobic010G200600--Sobic002G017100 Sobic010G037701--Sobic007G195900 Sobic010G037701--Sobic004G218200 Sobic010G037701--Sobic007G136000 Sobic010G037701--Sobic007G139850 Sobic010G037701--Sobic009G021050 Sobic010G037701--Sobic004G150901 Sobic010G037701--Sobic005G152550 Sobic010G037701--Sobic010G138600 Sobic010G037701--Sobic009G253600 Sobic002G084200--Sobic002G156800 Sobic002G084200--Sobic003G154900 Sobic002G084200--Sobic010G200600 Sobic002G084200--Sobic002G221500 Sobic002G084200--Sobic009G258700 Sobic002G084200--Sobic002G017100 Sobic002G084200--Sobic004G218200 Sobic002G084200--Sobic003G411500 Sobic003G014832 Sobic003G014832 Sobic002G084200--Sobic003G014832 SobicK044420 SobicK044420 Sobic008G181701--SobicK044420 Sobic001G258500 Sobic001G258500 Sobic008G181701--Sobic001G258500 Sobic008G181701--Sobic009G021050 Sobic008G181701--Sobic007G139850 Sobic008G181701--Sobic005G152550 Sobic008G181701--Sobic008G074200 Sobic009G220400 Sobic009G220400 Sobic008G181701--Sobic009G220400 Sobic010G122900 Sobic010G122900 Sobic008G181701--Sobic010G122900 Sobic001G021100 Sobic001G021100 Sobic008G181701--Sobic001G021100 Sobic002G156800--Sobic002G084200 Sobic002G156800--Sobic002G221500 Sobic002G156800--Sobic003G154900 Sobic002G156800--Sobic010G200600 Sobic002G156800--Sobic009G258700 Sobic002G156800--Sobic003G411500 Sobic002G156800--Sobic003G014832 Sobic006G138700 Sobic006G138700 Sobic002G156800--Sobic006G138700 Sobic002G156800--Sobic002G017100
Octagon: transcription factors


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