Gene annotation
Transcriptome id Sobic.001G021100.2
Synonym Sb01g002030
Functional annotation mTERF family protein, expressed
UniProt A0A1Z5S4H9
Pfam PF02536
Panther DB PTHR13068 PTHR13068:SF17
NCBI CDD -
KEGG Orthology K15032; mTERF domain-containing protein, mitochondrial
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005739mitochondrion GO:0003690double-stranded DNA binding


Orthologs (automatic annotation)
TAIR AT5G07900 : Mitochondrial transcription termination factor family protein
RAP-DB (Rice) LOC_Os11g09990.1 : mTERF family protein, expressed
MaizeGDB (Corn) Zm00025a008824
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G415901 - -
2 Sobic.006G221900 MBTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
3 Sobic.003G077001 - -
4 Sobic.009G220400 glyoxal oxidase-related, putative, expressed -
5 Sobic.010G172600 expressed protein -
6 Sobic.005G159100 dirigent-like protein pDIR17, putative, expressed -
7 Sobic.001G120850 - -
8 Sobic.001G056000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.005G071000 NBS-LRR disease resistance protein, putative, expressed -
10 Sobic.002G113066 - -
11 Sobic.004G236901 - -
12 Sobic.008G175966 - -
13 Sobic.010G216500 OsFBDUF34 - F-box and DUF domain containing protein, expressed -
14 Sobic.010G123750 - -
15 Sobic.008G145700 expressed protein -
16 Sobic.K044420 - -
17 Sobic.001G210500 RIPER6 - Ripening-related family protein precursor, expressed -
18 Sobic.003G003900 - -
19 Sobic.007G069900 expressed protein -
20 Sobic.004G342800 OsFBL33 - F-box domain and LRR containing protein, expressed -


Gene co-expression network
sample Sobic001G021100 Sobic001G021100 Sobic001G415901 Sobic001G415901 Sobic001G021100--Sobic001G415901 Sobic006G221900 Sobic006G221900 Sobic001G021100--Sobic006G221900 Sobic003G077001 Sobic003G077001 Sobic001G021100--Sobic003G077001 Sobic009G220400 Sobic009G220400 Sobic001G021100--Sobic009G220400 Sobic010G172600 Sobic010G172600 Sobic001G021100--Sobic010G172600 Sobic005G159100 Sobic005G159100 Sobic001G021100--Sobic005G159100 Sobic001G120850 Sobic001G120850 Sobic001G021100--Sobic001G120850 Sobic001G056000 Sobic001G056000 Sobic001G021100--Sobic001G056000 Sobic005G071000 Sobic005G071000 Sobic001G021100--Sobic005G071000 Sobic001G415901--Sobic003G077001 Sobic001G415901--Sobic006G221900 Sobic002G113066 Sobic002G113066 Sobic001G415901--Sobic002G113066 Sobic001G415901--Sobic005G159100 Sobic001G415901--Sobic001G120850 Sobic001G415901--Sobic010G172600 Sobic003G003900 Sobic003G003900 Sobic001G415901--Sobic003G003900 Sobic008G145700 Sobic008G145700 Sobic001G415901--Sobic008G145700 Sobic001G210500 Sobic001G210500 Sobic001G415901--Sobic001G210500 Sobic006G221900--Sobic001G415901 Sobic006G221900--Sobic010G172600 Sobic006G221900--Sobic003G077001 Sobic006G221900--Sobic001G120850 Sobic006G221900--Sobic005G159100 Sobic006G221900--Sobic002G113066 Sobic010G216500 Sobic010G216500 Sobic006G221900--Sobic010G216500 Sobic006G221900--Sobic008G145700 Sobic006G221900--Sobic001G210500 Sobic003G077001--Sobic002G113066 Sobic003G077001--Sobic003G003900 Sobic003G077001--Sobic001G415901 Sobic003G077001--Sobic005G159100 Sobic003G077001--Sobic006G221900 Sobic003G077001--Sobic001G120850 Sobic003G077001--Sobic008G145700 Sobic005G214900 Sobic005G214900 Sobic003G077001--Sobic005G214900 Sobic003G077001--Sobic010G172600 Sobic009G220400--Sobic005G071000 Sobic009G220400--Sobic001G056000 Sobic004G236901 Sobic004G236901 Sobic009G220400--Sobic004G236901 Sobic010G123750 Sobic010G123750 Sobic009G220400--Sobic010G123750 SobicK044420 SobicK044420 Sobic009G220400--SobicK044420 Sobic007G069900 Sobic007G069900 Sobic009G220400--Sobic007G069900 Sobic001G258500 Sobic001G258500 Sobic009G220400--Sobic001G258500 Sobic008G031800 Sobic008G031800 Sobic009G220400--Sobic008G031800 Sobic007G084900 Sobic007G084900 Sobic009G220400--Sobic007G084900 Sobic004G342800 Sobic004G342800 Sobic010G172600--Sobic004G342800 Sobic010G172600--Sobic001G120850 Sobic010G172600--Sobic001G415901 Sobic010G172600--Sobic006G221900 Sobic010G172600--Sobic005G159100 Sobic010G172600--Sobic010G216500 Sobic010G172600--Sobic001G210500 Sobic010G172600--Sobic003G077001 Sobic007G118700 Sobic007G118700 Sobic010G172600--Sobic007G118700 Sobic005G159100--Sobic001G415901 Sobic005G159100--Sobic003G077001 Sobic005G159100--Sobic006G221900 Sobic005G159100--Sobic010G172600 Sobic005G159100--Sobic002G113066 Sobic005G159100--Sobic001G120850 Sobic005G159100--Sobic001G210500 Sobic005G159100--Sobic010G216500 Sobic005G159100--Sobic008G145700 Sobic001G120850--Sobic001G415901 Sobic001G120850--Sobic010G172600 Sobic001G120850--Sobic006G221900 Sobic001G120850--Sobic003G077001 Sobic001G120850--Sobic010G216500 Sobic001G120850--Sobic002G113066 Sobic001G120850--Sobic005G159100 Sobic001G120850--Sobic007G118700 Sobic005G217400 Sobic005G217400 Sobic001G120850--Sobic005G217400 Sobic001G056000--Sobic009G220400 Sobic001G056000--Sobic005G071000 Sobic001G056000--Sobic004G236901 Sobic001G056000--Sobic010G123750 Sobic001G056000--SobicK044420 Sobic001G056000--Sobic007G069900 Sobic001G056000--Sobic001G258500 Sobic001G056000--Sobic007G084900 Sobic001G056000--Sobic008G031800 Sobic005G071000--Sobic009G220400 Sobic005G071000--Sobic001G056000 Sobic005G071000--Sobic004G236901 Sobic005G071000--Sobic010G123750 Sobic005G071000--SobicK044420 Sobic005G071000--Sobic007G069900 Sobic005G071000--Sobic001G258500 Sobic003G384650 Sobic003G384650 Sobic005G071000--Sobic003G384650 Sobic005G071000--Sobic007G084900
Octagon: transcription factors


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