Gene annotation
Transcriptome id Sobic.007G069900.1
Synonym Sb07g005520
Functional annotation expressed protein
UniProt A0A1Z5R8E0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g09360.1 : expressed protein
MaizeGDB (Corn) Zm00025a029946
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G123750 - -
2 Sobic.009G220400 glyoxal oxidase-related, putative, expressed -
3 Sobic.005G071000 NBS-LRR disease resistance protein, putative, expressed -
4 Sobic.001G056000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.004G236901 - -
6 Sobic.K044420 - -
7 Sobic.001G507933 - -
8 Sobic.008G177700 strictosidine synthase, putative, expressed -
9 Sobic.003G242500 expressed protein -
10 Sobic.004G254200 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
11 Sobic.003G408700 expressed protein -
12 Sobic.010G141700 FAR1 family protein, expressed -
13 Sobic.001G258500 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.007G084900 - -
15 Sobic.008G031800 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.001G371500 - -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic007G069900 Sobic007G069900 Sobic010G123750 Sobic010G123750 Sobic007G069900--Sobic010G123750 Sobic009G220400 Sobic009G220400 Sobic007G069900--Sobic009G220400 Sobic005G071000 Sobic005G071000 Sobic007G069900--Sobic005G071000 Sobic001G056000 Sobic001G056000 Sobic007G069900--Sobic001G056000 Sobic004G236901 Sobic004G236901 Sobic007G069900--Sobic004G236901 SobicK044420 SobicK044420 Sobic007G069900--SobicK044420 Sobic001G507933 Sobic001G507933 Sobic007G069900--Sobic001G507933 Sobic008G177700 Sobic008G177700 Sobic007G069900--Sobic008G177700 Sobic003G242500 Sobic003G242500 Sobic007G069900--Sobic003G242500 Sobic010G123750--Sobic009G220400 Sobic010G123750--Sobic004G236901 Sobic010G123750--Sobic005G071000 Sobic010G123750--Sobic001G056000 Sobic010G123750--Sobic007G069900 Sobic004G075301 Sobic004G075301 Sobic010G123750--Sobic004G075301 Sobic010G123750--Sobic003G242500 Sobic001G018700 Sobic001G018700 Sobic010G123750--Sobic001G018700 Sobic009G220400--Sobic005G071000 Sobic009G220400--Sobic001G056000 Sobic009G220400--Sobic004G236901 Sobic009G220400--Sobic010G123750 Sobic009G220400--SobicK044420 Sobic009G220400--Sobic007G069900 Sobic001G258500 Sobic001G258500 Sobic009G220400--Sobic001G258500 Sobic008G031800 Sobic008G031800 Sobic009G220400--Sobic008G031800 Sobic007G084900 Sobic007G084900 Sobic009G220400--Sobic007G084900 Sobic005G071000--Sobic009G220400 Sobic005G071000--Sobic001G056000 Sobic005G071000--Sobic004G236901 Sobic005G071000--Sobic010G123750 Sobic005G071000--SobicK044420 Sobic005G071000--Sobic007G069900 Sobic005G071000--Sobic001G258500 Sobic003G384650 Sobic003G384650 Sobic005G071000--Sobic003G384650 Sobic005G071000--Sobic007G084900 Sobic001G056000--Sobic009G220400 Sobic001G056000--Sobic005G071000 Sobic001G056000--Sobic004G236901 Sobic001G056000--Sobic010G123750 Sobic001G056000--SobicK044420 Sobic001G056000--Sobic007G069900 Sobic001G056000--Sobic001G258500 Sobic001G056000--Sobic007G084900 Sobic001G056000--Sobic008G031800 Sobic004G236901--Sobic009G220400 Sobic004G236901--Sobic005G071000 Sobic004G236901--Sobic001G056000 Sobic004G236901--Sobic010G123750 Sobic004G236901--Sobic007G069900 Sobic004G236901--SobicK044420 Sobic004G236901--Sobic001G018700 SobicK044420--Sobic009G220400 SobicK044420--Sobic005G071000 SobicK044420--Sobic001G056000 SobicK044420--Sobic004G236901 SobicK044420--Sobic007G069900 SobicK044420--Sobic010G123750 Sobic009G021050 Sobic009G021050 SobicK044420--Sobic009G021050 Sobic007G139850 Sobic007G139850 SobicK044420--Sobic007G139850 SobicK044420--Sobic001G258500 Sobic004G254200 Sobic004G254200 Sobic001G507933--Sobic004G254200 Sobic003G408700 Sobic003G408700 Sobic001G507933--Sobic003G408700 Sobic010G141700 Sobic010G141700 Sobic001G507933--Sobic010G141700 Sobic001G507933--Sobic008G177700 Sobic001G507933--Sobic003G242500 Sobic002G430601 Sobic002G430601 Sobic001G507933--Sobic002G430601 Sobic001G507933--Sobic001G018700 Sobic008G177700--Sobic003G242500 Sobic008G177700--Sobic001G507933 Sobic008G177700--Sobic004G254200 Sobic008G177700--Sobic003G408700 Sobic008G177700--Sobic010G141700 Sobic001G030800 Sobic001G030800 Sobic008G177700--Sobic001G030800 Sobic008G177700--Sobic001G018700 Sobic003G242500--Sobic008G177700 Sobic003G242500--Sobic001G507933 Sobic003G242500--Sobic001G030800 Sobic003G242500--Sobic001G018700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.