Gene annotation
Transcriptome id Sobic.003G074300.1
Synonym Sb03g006270
Functional annotation expressed protein
UniProt A0A1B6Q1V5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g05100.1 : expressed protein
MaizeGDB (Corn) Zm00025a023480
Brachypodium KQK02665
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G074300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G057900 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
2 Sobic.004G234000 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
3 Sobic.001G156200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.004G200100 leucine-rich repeat family protein, putative, expressed -
5 Sobic.005G067200 expressed protein -
6 Sobic.010G039700 pollen-specific protein, putative, expressed -
7 Sobic.003G370800 aminotransferase, classes I and II, domain containing protein, expressed K15849: PAT, bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
8 Sobic.001G407300 expressed protein -
9 Sobic.007G195900 expressed protein -
10 Sobic.003G106800 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
11 Sobic.004G327900 expressed protein -
12 Sobic.009G143600 clathrin assembly protein, putative, expressed -
13 Sobic.004G218200 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CPuORF40 - conserved peptide uORF-containing transcript, expressed -
14 Sobic.004G093000 protein kinase domain containing protein, putative, expressed -
15 Sobic.007G009900 - -
16 Sobic.003G384750 - -
17 Sobic.002G408400 beta-amylase, putative, expressed -
18 Sobic.009G095400 - -
19 Sobic.001G123400 expressed protein -
20 Sobic.010G279600 ZOS2-19 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic003G074300 Sobic003G074300 Sobic001G057900 Sobic001G057900 Sobic003G074300--Sobic001G057900 Sobic004G234000 Sobic004G234000 Sobic003G074300--Sobic004G234000 Sobic001G156200 Sobic001G156200 Sobic003G074300--Sobic001G156200 Sobic004G200100 Sobic004G200100 Sobic003G074300--Sobic004G200100 Sobic005G067200 Sobic005G067200 Sobic003G074300--Sobic005G067200 Sobic010G039700 Sobic010G039700 Sobic003G074300--Sobic010G039700 Sobic003G370800 Sobic003G370800 Sobic003G074300--Sobic003G370800 Sobic001G407300 Sobic001G407300 Sobic003G074300--Sobic001G407300 Sobic007G195900 Sobic007G195900 Sobic003G074300--Sobic007G195900 Sobic001G057900--Sobic003G074300 Sobic001G057900--Sobic001G156200 Sobic001G057900--Sobic005G067200 Sobic001G057900--Sobic004G200100 Sobic003G403000 Sobic003G403000 Sobic001G057900--Sobic003G403000 Sobic001G057900--Sobic004G234000 Sobic001G057900--Sobic001G407300 Sobic004G218200 Sobic004G218200 Sobic001G057900--Sobic004G218200 Sobic010G279600 Sobic010G279600 Sobic001G057900--Sobic010G279600 Sobic004G234000--Sobic004G200100 Sobic004G234000--Sobic003G074300 Sobic004G327900 Sobic004G327900 Sobic004G234000--Sobic004G327900 Sobic004G234000--Sobic001G156200 Sobic002G381800 Sobic002G381800 Sobic004G234000--Sobic002G381800 Sobic001G123400 Sobic001G123400 Sobic004G234000--Sobic001G123400 Sobic004G288000 Sobic004G288000 Sobic004G234000--Sobic004G288000 Sobic003G394000 Sobic003G394000 Sobic004G234000--Sobic003G394000 Sobic007G009900 Sobic007G009900 Sobic004G234000--Sobic007G009900 Sobic001G156200--Sobic004G234000 Sobic001G156200--Sobic001G057900 Sobic001G156200--Sobic003G074300 Sobic004G355900 Sobic004G355900 Sobic001G156200--Sobic004G355900 Sobic002G083100 Sobic002G083100 Sobic001G156200--Sobic002G083100 Sobic004G014900 Sobic004G014900 Sobic001G156200--Sobic004G014900 Sobic004G255100 Sobic004G255100 Sobic001G156200--Sobic004G255100 Sobic001G156200--Sobic004G200100 Sobic001G003400 Sobic001G003400 Sobic001G156200--Sobic001G003400 Sobic004G200100--Sobic003G394000 Sobic009G170900 Sobic009G170900 Sobic004G200100--Sobic009G170900 Sobic007G136000 Sobic007G136000 Sobic004G200100--Sobic007G136000 Sobic004G200100--Sobic004G234000 Sobic004G200100--Sobic002G381800 Sobic005G160801 Sobic005G160801 Sobic004G200100--Sobic005G160801 Sobic010G082300 Sobic010G082300 Sobic004G200100--Sobic010G082300 Sobic004G060400 Sobic004G060400 Sobic004G200100--Sobic004G060400 Sobic004G348000 Sobic004G348000 Sobic004G200100--Sobic004G348000 Sobic005G067200--Sobic003G403000 Sobic005G067200--Sobic007G136000 Sobic002G068701 Sobic002G068701 Sobic005G067200--Sobic002G068701 Sobic009G044200 Sobic009G044200 Sobic005G067200--Sobic009G044200 Sobic005G067200--Sobic004G218200 Sobic004G281500 Sobic004G281500 Sobic005G067200--Sobic004G281500 Sobic005G067200--Sobic001G407300 Sobic005G067200--Sobic010G279600 Sobic005G067200--Sobic004G200100 Sobic010G032200 Sobic010G032200 Sobic010G039700--Sobic010G032200 Sobic010G039700--Sobic005G067200 Sobic009G237900 Sobic009G237900 Sobic010G039700--Sobic009G237900 Sobic004G240250 Sobic004G240250 Sobic010G039700--Sobic004G240250 Sobic010G039700--Sobic002G068701 Sobic001G041300 Sobic001G041300 Sobic010G039700--Sobic001G041300 Sobic004G200600 Sobic004G200600 Sobic010G039700--Sobic004G200600 Sobic010G200600 Sobic010G200600 Sobic010G039700--Sobic010G200600 Sobic005G027250 Sobic005G027250 Sobic010G039700--Sobic005G027250 Sobic002G408400 Sobic002G408400 Sobic003G370800--Sobic002G408400 Sobic008G104900 Sobic008G104900 Sobic003G370800--Sobic008G104900 Sobic009G212900 Sobic009G212900 Sobic003G370800--Sobic009G212900 Sobic009G143600 Sobic009G143600 Sobic003G370800--Sobic009G143600 Sobic003G370800--Sobic007G009900 Sobic003G370800--Sobic004G200100 Sobic003G370800--Sobic003G394000 Sobic003G384750 Sobic003G384750 Sobic003G370800--Sobic003G384750 Sobic001G486800 Sobic001G486800 Sobic003G370800--Sobic001G486800 Sobic010G261900 Sobic010G261900 Sobic001G407300--Sobic010G261900 Sobic001G407300--Sobic010G279600 Sobic004G289100 Sobic004G289100 Sobic001G407300--Sobic004G289100 Sobic001G407300--Sobic004G281500 Sobic001G407300--Sobic009G044200 Sobic001G152800 Sobic001G152800 Sobic001G407300--Sobic001G152800 Sobic004G008500 Sobic004G008500 Sobic001G407300--Sobic004G008500 Sobic001G407300--Sobic005G067200 Sobic003G211000 Sobic003G211000 Sobic001G407300--Sobic003G211000 Sobic010G037701 Sobic010G037701 Sobic007G195900--Sobic010G037701 Sobic007G195900--Sobic004G218200 Sobic007G195900--Sobic003G074300 Sobic003G144100 Sobic003G144100 Sobic007G195900--Sobic003G144100 Sobic007G195900--Sobic001G407300 Sobic007G195900--Sobic005G067200 Sobic003G106800 Sobic003G106800 Sobic007G195900--Sobic003G106800 Sobic001G330775 Sobic001G330775 Sobic007G195900--Sobic001G330775 Sobic007G195900--Sobic001G057900
Octagon: transcription factors


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