Gene annotation
Transcriptome id Sobic.009G143600.1
Synonym Sb09g020870
Functional annotation clathrin assembly protein, putative, expressed
UniProt C5YY80
Pfam PF07651
Panther DB PTHR22951 PTHR22951:SF12
NCBI CDD KOG0251; Clathrin assembly protein AP180 and related proteins, contain ENTH domain
KEGG Orthology -
Gene Ontology GO:0005543; phospholipid binding


Orthologs (automatic annotation)
TAIR AT1G03050 : ENTH/ANTH/VHS superfamily protein
RAP-DB (Rice) LOC_Os05g35160.1 : clathrin assembly protein, putative, expressed
MaizeGDB (Corn) Zm00025a037358
Brachypodium KQK06147
Barley HORVU1Hr1G065590.1 , HORVU1Hr1G065590.2 , HORVU0Hr1G000720.4 , HORVU0Hr1G000720.3 , HORVU0Hr1G000720.2 , HORVU0Hr1G000720.1
Wheat TraesCS1A02G266200 , TraesCS1D02G266400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G244200 OsFBDUF42 - F-box and DUF domain containing protein, expressed -
2 Sobic.003G370800 aminotransferase, classes I and II, domain containing protein, expressed K15849: PAT, bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
3 Sobic.009G212900 myosin head family protein, expressed K10357: myosin V
4 Sobic.002G408400 beta-amylase, putative, expressed -
5 Sobic.004G145550 - -
6 Sobic.003G384750 - -
7 Sobic.007G009900 - -
8 Sobic.003G106800 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
9 Sobic.001G123400 expressed protein -
10 Sobic.001G057900 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
11 Sobic.003G074300 expressed protein -
12 Sobic.008G104900 - -
13 Sobic.002G121201 - -
14 Sobic.006G275900 pentatricopeptide, putative, expressed -
15 Sobic.010G093200 expressed protein -
16 Sobic.007G195900 expressed protein -
17 Sobic.008G072400 protein kinase family protein, putative, expressed -
18 Sobic.004G327900 expressed protein -
19 Sobic.010G037701 - -
20 Sobic.005G106700 roothairless 1, putative, expressed -


Gene co-expression network
sample Sobic009G143600 Sobic009G143600 Sobic006G244200 Sobic006G244200 Sobic009G143600--Sobic006G244200 Sobic003G370800 Sobic003G370800 Sobic009G143600--Sobic003G370800 Sobic009G212900 Sobic009G212900 Sobic009G143600--Sobic009G212900 Sobic002G408400 Sobic002G408400 Sobic009G143600--Sobic002G408400 Sobic004G145550 Sobic004G145550 Sobic009G143600--Sobic004G145550 Sobic003G384750 Sobic003G384750 Sobic009G143600--Sobic003G384750 Sobic007G009900 Sobic007G009900 Sobic009G143600--Sobic007G009900 Sobic003G106800 Sobic003G106800 Sobic009G143600--Sobic003G106800 Sobic001G123400 Sobic001G123400 Sobic009G143600--Sobic001G123400 Sobic006G244200--Sobic004G145550 Sobic006G244200--Sobic009G143600 Sobic006G244200--Sobic003G384750 Sobic001G520600 Sobic001G520600 Sobic006G244200--Sobic001G520600 Sobic010G093200 Sobic010G093200 Sobic006G244200--Sobic010G093200 Sobic002G375200 Sobic002G375200 Sobic006G244200--Sobic002G375200 Sobic007G113101 Sobic007G113101 Sobic006G244200--Sobic007G113101 Sobic006G252800 Sobic006G252800 Sobic006G244200--Sobic006G252800 Sobic006G244200--Sobic002G408400 Sobic003G370800--Sobic002G408400 Sobic008G104900 Sobic008G104900 Sobic003G370800--Sobic008G104900 Sobic003G370800--Sobic009G212900 Sobic003G370800--Sobic009G143600 Sobic003G370800--Sobic007G009900 Sobic004G200100 Sobic004G200100 Sobic003G370800--Sobic004G200100 Sobic003G394000 Sobic003G394000 Sobic003G370800--Sobic003G394000 Sobic003G370800--Sobic003G384750 Sobic001G486800 Sobic001G486800 Sobic003G370800--Sobic001G486800 Sobic009G212900--Sobic003G370800 Sobic009G212900--Sobic007G009900 Sobic009G212900--Sobic009G143600 Sobic009G212900--Sobic001G123400 Sobic009G212900--Sobic004G200100 Sobic009G212900--Sobic003G106800 Sobic004G327900 Sobic004G327900 Sobic009G212900--Sobic004G327900 Sobic009G212900--Sobic002G408400 Sobic005G106700 Sobic005G106700 Sobic009G212900--Sobic005G106700 Sobic002G408400--Sobic008G104900 Sobic002G408400--Sobic003G370800 Sobic008G057200 Sobic008G057200 Sobic002G408400--Sobic008G057200 Sobic002G408400--Sobic007G009900 Sobic010G103400 Sobic010G103400 Sobic002G408400--Sobic010G103400 Sobic002G408400--Sobic003G384750 Sobic002G408400--Sobic009G143600 Sobic002G408400--Sobic009G212900 Sobic002G408400--Sobic006G244200 Sobic004G145550--Sobic006G244200 Sobic004G145550--Sobic001G520600 Sobic004G145550--Sobic010G093200 Sobic004G145550--Sobic003G384750 Sobic004G145550--Sobic002G375200 Sobic008G014400 Sobic008G014400 Sobic004G145550--Sobic008G014400 Sobic004G145550--Sobic001G123400 Sobic004G145550--Sobic009G143600 Sobic004G334601 Sobic004G334601 Sobic004G145550--Sobic004G334601 Sobic009G174800 Sobic009G174800 Sobic003G384750--Sobic009G174800 Sobic003G384750--Sobic002G408400 Sobic003G384750--Sobic004G145550 Sobic003G384750--Sobic006G244200 Sobic007G160050 Sobic007G160050 Sobic003G384750--Sobic007G160050 Sobic003G384750--Sobic008G057200 Sobic003G384750--Sobic003G370800 Sobic003G384750--Sobic009G143600 Sobic001G159500 Sobic001G159500 Sobic003G384750--Sobic001G159500 Sobic007G009900--Sobic010G103400 Sobic007G009900--Sobic008G104900 Sobic007G009900--Sobic001G123400 Sobic007G009900--Sobic002G408400 Sobic007G009900--Sobic003G370800 Sobic007G009900--Sobic001G486800 Sobic007G009900--Sobic009G212900 Sobic007G009900--Sobic008G057200 Sobic007G009900--Sobic004G200100 Sobic003G106800--Sobic005G106700 Sobic003G106800--Sobic009G212900 Sobic003G106800--Sobic004G327900 Sobic003G106800--Sobic001G123400 Sobic003G106800--Sobic010G093200 Sobic003G106800--Sobic004G200100 Sobic003G106800--Sobic009G143600 Sobic007G136000 Sobic007G136000 Sobic003G106800--Sobic007G136000 Sobic001G124900 Sobic001G124900 Sobic003G106800--Sobic001G124900 Sobic001G123400--Sobic010G093200 Sobic001G123400--Sobic007G009900 Sobic001G123400--Sobic004G327900 Sobic001G123400--Sobic001G520600 Sobic001G123400--Sobic009G212900 Sobic001G123400--Sobic005G106700 Sobic004G234000 Sobic004G234000 Sobic001G123400--Sobic004G234000 Sobic001G123400--Sobic004G145550 Sobic001G123400--Sobic004G200100
Octagon: transcription factors


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