Gene annotation
Transcriptome id Sobic.002G049500.1
Synonym
Functional annotation LTPL77 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
UniProt A0A1B6Q991
Pfam PF14368
Panther DB PTHR33044 PTHR33044:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22600 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os07g07870.1 : LTPL77 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a045126
Brachypodium PNT76937
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G541601 - -
2 Sobic.004G323500 serine threonine kinase, putative, expressed -
3 Sobic.007G019700 ATCHX, putative, expressed -
4 Sobic.006G264700 - -
5 Sobic.003G270700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
6 Sobic.009G176900 ATCHX, putative, expressed -
7 Sobic.001G229100 exostosin family domain containing protein, expressed -
8 Sobic.001G492900 calmodulin-binding protein, putative, expressed -
9 Sobic.005G204300 RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
10 Sobic.007G184300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@aspartic proteinase-like protein 2 precursor, putative, expressed -
11 Sobic.004G060400 ANTH/ENTH domain containing protein, putative, expressed -
12 Sobic.010G096500 expressed protein -
13 Sobic.002G363700 expressed protein -
14 Sobic.004G093000 protein kinase domain containing protein, putative, expressed -
15 Sobic.003G374400 chloride channel protein, putative, expressed K05016: chloride channel 7
16 Sobic.001G487000 expressed protein -
17 Sobic.006G115800 fasciclin domain containing protein, expressed -
18 Sobic.006G278900 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@auxin response factor, putative, expressed -
19 Sobic.001G251500 calmodulin-binding protein, putative, expressed -
20 Sobic.004G025900 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase


Gene co-expression network
sample Sobic002G049500 Sobic002G049500 Sobic001G541601 Sobic001G541601 Sobic002G049500--Sobic001G541601 Sobic004G323500 Sobic004G323500 Sobic002G049500--Sobic004G323500 Sobic007G019700 Sobic007G019700 Sobic002G049500--Sobic007G019700 Sobic006G264700 Sobic006G264700 Sobic002G049500--Sobic006G264700 Sobic003G270700 Sobic003G270700 Sobic002G049500--Sobic003G270700 Sobic009G176900 Sobic009G176900 Sobic002G049500--Sobic009G176900 Sobic001G229100 Sobic001G229100 Sobic002G049500--Sobic001G229100 Sobic001G492900 Sobic001G492900 Sobic002G049500--Sobic001G492900 Sobic005G204300 Sobic005G204300 Sobic002G049500--Sobic005G204300 Sobic001G541601--Sobic006G264700 Sobic010G096500 Sobic010G096500 Sobic001G541601--Sobic010G096500 Sobic001G541601--Sobic001G229100 Sobic001G541601--Sobic003G270700 Sobic010G196300 Sobic010G196300 Sobic001G541601--Sobic010G196300 Sobic008G139500 Sobic008G139500 Sobic001G541601--Sobic008G139500 Sobic001G487000 Sobic001G487000 Sobic001G541601--Sobic001G487000 Sobic001G541601--Sobic004G323500 Sobic004G025900 Sobic004G025900 Sobic001G541601--Sobic004G025900 Sobic004G323500--Sobic006G264700 Sobic006G115800 Sobic006G115800 Sobic004G323500--Sobic006G115800 Sobic004G323500--Sobic001G229100 Sobic005G217101 Sobic005G217101 Sobic004G323500--Sobic005G217101 Sobic006G193700 Sobic006G193700 Sobic004G323500--Sobic006G193700 Sobic004G323500--Sobic004G025900 Sobic010G063700 Sobic010G063700 Sobic004G323500--Sobic010G063700 Sobic005G212900 Sobic005G212900 Sobic004G323500--Sobic005G212900 Sobic006G105500 Sobic006G105500 Sobic004G323500--Sobic006G105500 Sobic004G060400 Sobic004G060400 Sobic007G019700--Sobic004G060400 Sobic006G232700 Sobic006G232700 Sobic007G019700--Sobic006G232700 Sobic010G074000 Sobic010G074000 Sobic007G019700--Sobic010G074000 Sobic003G254200 Sobic003G254200 Sobic007G019700--Sobic003G254200 Sobic002G298201 Sobic002G298201 Sobic007G019700--Sobic002G298201 Sobic001G196400 Sobic001G196400 Sobic007G019700--Sobic001G196400 Sobic005G161400 Sobic005G161400 Sobic007G019700--Sobic005G161400 Sobic003G317000 Sobic003G317000 Sobic007G019700--Sobic003G317000 Sobic005G147900 Sobic005G147900 Sobic007G019700--Sobic005G147900 Sobic006G264700--Sobic004G323500 Sobic006G264700--Sobic006G115800 Sobic006G264700--Sobic001G229100 Sobic006G264700--Sobic004G025900 Sobic001G315000 Sobic001G315000 Sobic006G264700--Sobic001G315000 Sobic006G264700--Sobic005G217101 Sobic006G028600 Sobic006G028600 Sobic006G264700--Sobic006G028600 Sobic006G264700--Sobic010G196300 Sobic001G500900 Sobic001G500900 Sobic006G264700--Sobic001G500900 Sobic003G270700--Sobic010G096500 Sobic007G184300 Sobic007G184300 Sobic003G270700--Sobic007G184300 Sobic002G241900 Sobic002G241900 Sobic003G270700--Sobic002G241900 Sobic007G213200 Sobic007G213200 Sobic003G270700--Sobic007G213200 Sobic006G218100 Sobic006G218100 Sobic003G270700--Sobic006G218100 Sobic003G270700--Sobic001G541601 Sobic005G160900 Sobic005G160900 Sobic003G270700--Sobic005G160900 Sobic003G270700--Sobic006G115800 Sobic003G270700--Sobic006G264700 Sobic002G106700 Sobic002G106700 Sobic009G176900--Sobic002G106700 Sobic008G091785 Sobic008G091785 Sobic009G176900--Sobic008G091785 Sobic007G007400 Sobic007G007400 Sobic009G176900--Sobic007G007400 Sobic006G230000 Sobic006G230000 Sobic009G176900--Sobic006G230000 Sobic008G164000 Sobic008G164000 Sobic009G176900--Sobic008G164000 Sobic001G135650 Sobic001G135650 Sobic009G176900--Sobic001G135650 Sobic009G253600 Sobic009G253600 Sobic009G176900--Sobic009G253600 Sobic003G078000 Sobic003G078000 Sobic009G176900--Sobic003G078000 Sobic010G138600 Sobic010G138600 Sobic009G176900--Sobic010G138600 Sobic001G229100--Sobic006G264700 Sobic001G229100--Sobic001G315000 Sobic001G229100--Sobic006G028600 Sobic003G054800 Sobic003G054800 Sobic001G229100--Sobic003G054800 Sobic004G002300 Sobic004G002300 Sobic001G229100--Sobic004G002300 Sobic003G100600 Sobic003G100600 Sobic001G229100--Sobic003G100600 Sobic001G380000 Sobic001G380000 Sobic001G229100--Sobic001G380000 Sobic001G229100--Sobic001G500900 Sobic006G018701 Sobic006G018701 Sobic001G229100--Sobic006G018701 Sobic001G492900--Sobic002G049500 Sobic001G251500 Sobic001G251500 Sobic001G492900--Sobic001G251500 Sobic006G178700 Sobic006G178700 Sobic001G492900--Sobic006G178700 Sobic009G242032 Sobic009G242032 Sobic001G492900--Sobic009G242032 Sobic004G093000 Sobic004G093000 Sobic001G492900--Sobic004G093000 Sobic005G024300 Sobic005G024300 Sobic001G492900--Sobic005G024300 Sobic010G078800 Sobic010G078800 Sobic001G492900--Sobic010G078800 Sobic010G172100 Sobic010G172100 Sobic001G492900--Sobic010G172100 Sobic001G174300 Sobic001G174300 Sobic001G492900--Sobic001G174300 Sobic009G145800 Sobic009G145800 Sobic005G204300--Sobic009G145800 Sobic005G204300--Sobic002G049500 Sobic008G134000 Sobic008G134000 Sobic005G204300--Sobic008G134000 Sobic008G098098 Sobic008G098098 Sobic005G204300--Sobic008G098098 Sobic010G233600 Sobic010G233600 Sobic005G204300--Sobic010G233600 Sobic003G371900 Sobic003G371900 Sobic005G204300--Sobic003G371900 Sobic010G113800 Sobic010G113800 Sobic005G204300--Sobic010G113800 Sobic001G027400 Sobic001G027400 Sobic005G204300--Sobic001G027400 Sobic010G068001 Sobic010G068001 Sobic005G204300--Sobic010G068001
Octagon: transcription factors


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