Gene annotation
Transcriptome id Sobic.007G184300.2,Sobic.007G184300.1
Synonym Sb07g025440
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
aspartic proteinase-like protein 2 precursor, putative, expressed
UniProt C5YH92
Pfam PF00026
Panther DB PTHR13683 PTHR13683:SF375
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT1G05840 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os02g27360.1 : aspartic proteinase-like protein 2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a020319 , Zm00025a020317 , Zm00025a033622 , Zm00025a028509
Brachypodium KQK05437 , KQK05436 , KQJ99261
Barley -
Wheat TraesCS2A02G275000 , TraesCS2D02G273200 , TraesCS2B02G291900
Populus -


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cDNA sequences
Sobic.007G184300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G270700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
2 Sobic.010G096500 expressed protein -
3 Sobic.006G218100 expressed protein -
4 Sobic.002G241900 GPI-anchored protein, putative, expressed -
5 Sobic.004G323500 serine threonine kinase, putative, expressed -
6 Sobic.006G115800 fasciclin domain containing protein, expressed -
7 Sobic.006G264700 - -
8 Sobic.007G213200 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
9 Sobic.005G160900 DUF593 domain containing protein, expressed -
10 Sobic.001G541601 - -
11 Sobic.001G229100 exostosin family domain containing protein, expressed -
12 Sobic.010G266100 endoglucanase, putative, expressed -
13 Sobic.005G138900 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
14 Sobic.004G025900 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
15 Sobic.010G196300 CESA3 - cellulose synthase, expressed K10999: cellulose synthase A
16 Sobic.001G332400 DUF1336 domain containing protein, expressed -
17 Sobic.005G217101 - K01051: pectinesterase
18 Sobic.009G176900 ATCHX, putative, expressed -
19 Sobic.001G315000 fringe-related protein, putative, expressed -
20 Sobic.005G017400 ATCHX, putative, expressed -


Gene co-expression network
sample Sobic007G184300 Sobic007G184300 Sobic003G270700 Sobic003G270700 Sobic007G184300--Sobic003G270700 Sobic010G096500 Sobic010G096500 Sobic007G184300--Sobic010G096500 Sobic006G218100 Sobic006G218100 Sobic007G184300--Sobic006G218100 Sobic002G241900 Sobic002G241900 Sobic007G184300--Sobic002G241900 Sobic004G323500 Sobic004G323500 Sobic007G184300--Sobic004G323500 Sobic006G115800 Sobic006G115800 Sobic007G184300--Sobic006G115800 Sobic006G264700 Sobic006G264700 Sobic007G184300--Sobic006G264700 Sobic007G213200 Sobic007G213200 Sobic007G184300--Sobic007G213200 Sobic005G160900 Sobic005G160900 Sobic007G184300--Sobic005G160900 Sobic003G270700--Sobic010G096500 Sobic003G270700--Sobic007G184300 Sobic003G270700--Sobic002G241900 Sobic003G270700--Sobic007G213200 Sobic003G270700--Sobic006G218100 Sobic001G541601 Sobic001G541601 Sobic003G270700--Sobic001G541601 Sobic003G270700--Sobic005G160900 Sobic003G270700--Sobic006G115800 Sobic003G270700--Sobic006G264700 Sobic010G096500--Sobic003G270700 Sobic010G096500--Sobic007G184300 Sobic010G096500--Sobic002G241900 Sobic010G096500--Sobic007G213200 Sobic010G096500--Sobic005G160900 Sobic010G096500--Sobic001G541601 Sobic010G096500--Sobic006G218100 Sobic010G096500--Sobic006G115800 Sobic010G096500--Sobic006G264700 Sobic006G218100--Sobic007G213200 Sobic006G218100--Sobic005G160900 Sobic006G218100--Sobic007G184300 Sobic006G218100--Sobic002G241900 Sobic006G218100--Sobic003G270700 Sobic006G218100--Sobic010G096500 Sobic005G138900 Sobic005G138900 Sobic006G218100--Sobic005G138900 Sobic010G266100 Sobic010G266100 Sobic006G218100--Sobic010G266100 Sobic001G536200 Sobic001G536200 Sobic006G218100--Sobic001G536200 Sobic002G241900--Sobic007G213200 Sobic002G241900--Sobic005G160900 Sobic003G122900 Sobic003G122900 Sobic002G241900--Sobic003G122900 Sobic002G241900--Sobic005G138900 Sobic004G082000 Sobic004G082000 Sobic002G241900--Sobic004G082000 Sobic002G241900--Sobic003G270700 Sobic002G241900--Sobic010G096500 Sobic006G208300 Sobic006G208300 Sobic002G241900--Sobic006G208300 Sobic002G241900--Sobic007G184300 Sobic004G323500--Sobic006G264700 Sobic004G323500--Sobic006G115800 Sobic001G229100 Sobic001G229100 Sobic004G323500--Sobic001G229100 Sobic005G217101 Sobic005G217101 Sobic004G323500--Sobic005G217101 Sobic006G193700 Sobic006G193700 Sobic004G323500--Sobic006G193700 Sobic004G025900 Sobic004G025900 Sobic004G323500--Sobic004G025900 Sobic010G063700 Sobic010G063700 Sobic004G323500--Sobic010G063700 Sobic005G212900 Sobic005G212900 Sobic004G323500--Sobic005G212900 Sobic006G105500 Sobic006G105500 Sobic004G323500--Sobic006G105500 Sobic006G115800--Sobic005G217101 Sobic004G041800 Sobic004G041800 Sobic006G115800--Sobic004G041800 Sobic001G466100 Sobic001G466100 Sobic006G115800--Sobic001G466100 Sobic010G034300 Sobic010G034300 Sobic006G115800--Sobic010G034300 Sobic004G080000 Sobic004G080000 Sobic006G115800--Sobic004G080000 Sobic009G252000 Sobic009G252000 Sobic006G115800--Sobic009G252000 Sobic009G091000 Sobic009G091000 Sobic006G115800--Sobic009G091000 Sobic010G254100 Sobic010G254100 Sobic006G115800--Sobic010G254100 Sobic001G036200 Sobic001G036200 Sobic006G115800--Sobic001G036200 Sobic006G264700--Sobic004G323500 Sobic006G264700--Sobic006G115800 Sobic006G264700--Sobic001G229100 Sobic006G264700--Sobic004G025900 Sobic001G315000 Sobic001G315000 Sobic006G264700--Sobic001G315000 Sobic006G264700--Sobic005G217101 Sobic006G028600 Sobic006G028600 Sobic006G264700--Sobic006G028600 Sobic010G196300 Sobic010G196300 Sobic006G264700--Sobic010G196300 Sobic001G500900 Sobic001G500900 Sobic006G264700--Sobic001G500900 Sobic007G213200--Sobic002G241900 Sobic007G213200--Sobic004G082000 Sobic007G213200--Sobic005G160900 Sobic007G213200--Sobic010G266100 Sobic007G213200--Sobic006G218100 Sobic007G213200--Sobic005G138900 Sobic007G213200--Sobic003G270700 Sobic009G236700 Sobic009G236700 Sobic007G213200--Sobic009G236700 Sobic007G213200--Sobic010G096500 Sobic005G160900--Sobic007G213200 Sobic005G160900--Sobic002G241900 Sobic005G160900--Sobic006G218100 Sobic005G160900--Sobic010G096500 Sobic005G160900--Sobic004G082000 Sobic005G160900--Sobic003G270700 Sobic005G160900--Sobic003G122900 Sobic005G160900--Sobic005G138900 Sobic005G160900--Sobic007G184300
Octagon: transcription factors


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