Gene annotation
Transcriptome id Sobic.007G213200.1
Synonym Sb07g028040
Functional annotation peptide transporter PTR2, putative, expressed
UniProt C5YJ45
Pfam PF07690
Panther DB PTHR11654 PTHR11654:SF94
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology K14638; SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G22540 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os05g35650.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a043865 , Zm00025a037322 , Zm00025a026637 , Zm00025a033786 , Zm00025a026649 , Zm00025a005044 , Zm00025a039549
Brachypodium KQK10813 , KQK06085 , KQK06084 , KQK10814 , PNT73273 , KQK24132 , KQK06087 , KQK10815
Barley HORVU3Hr1G082460.1 , HORVU3Hr1G082490.1 , HORVU3Hr1G082490.2 , HORVU3Hr1G082460.2 , HORVU3Hr1G082490.4 , HORVU3Hr1G082490.5 , HORVU3Hr1G082460.7 , HORVU3Hr1G082490.7 , HORVU3Hr1G082460.9 , HORVU3Hr1G082460.8 , HORVU3Hr1G082250.2 , HORVU3Hr1G082250.1 , HORVU3Hr1G082580.10 , HORVU3Hr1G082580.11 , HORVU3Hr1G082580.12 , HORVU3Hr1G082580.13 , HORVU3Hr1G082300.5 , HORVU3Hr1G082580.8 , HORVU3Hr1G082580.9 , HORVU3Hr1G082580.2 , HORVU3Hr1G082580.3 , HORVU3Hr1G082580.1 , HORVU3Hr1G082580.6 , HORVU3Hr1G082580.7 , HORVU3Hr1G082580.4 , HORVU3Hr1G082580.5 , HORVU1Hr1G074550.6 , HORVU1Hr1G074550.7 , HORVU1Hr1G074550.4 , HORVU1Hr1G074550.5 , HORVU1Hr1G074550.2 , HORVU1Hr1G074550.3 , HORVU1Hr1G074550.1 , HORVU1Hr1G074550.8 , HORVU1Hr1G074550.9 , HORVU3Hr1G082460.10 , HORVU1Hr1G053990.10 , HORVU1Hr1G074490.3 , HORVU1Hr1G074490.2 , HORVU1Hr1G074490.1 , HORVU1Hr1G074490.7 , HORVU1Hr1G074490.6 , HORVU1Hr1G074490.5 , HORVU1Hr1G074490.4 , HORVU1Hr1G074490.9 , HORVU1Hr1G074490.8 , HORVU3Hr1G082300.8 , HORVU3Hr1G082300.4 , HORVU3Hr1G082300.6 , HORVU3Hr1G082300.7 , HORVU3Hr1G082300.3 , HORVU1Hr1G053990.1 , HORVU1Hr1G053990.2 , HORVU1Hr1G053990.5 , HORVU1Hr1G053990.4 , HORVU1Hr1G053990.7 , HORVU1Hr1G053990.6 , HORVU1Hr1G053990.9 , HORVU1Hr1G053990.8 , HORVU3Hr1G082460.3 , HORVU3Hr1G082490.3 , HORVU3Hr1G082460.5 , HORVU3Hr1G082460.4 , HORVU3Hr1G082460.6 , HORVU1Hr1G074450.7 , HORVU1Hr1G074450.6 , HORVU1Hr1G074450.5 , HORVU1Hr1G074450.3 , HORVU1Hr1G074450.2 , HORVU1Hr1G074450.1 , HORVU1Hr1G074450.8 , HORVU1Hr1G074490.10
Wheat TraesCS3A02G382200 , TraesCS3A02G382200 , TraesCS3B02G415600 , TraesCS4B02G057000 , TraesCS7B02G040100 , TraesCS1B02G280000 , TraesCS3A02G383200 , TraesCS4B02G375800 , TraesCS5A02G537100 , TraesCS3A02G382300 , TraesCS1D02G269600 , TraesCS1A02G269600 , TraesCS3B02G414800 , TraesCS1A02G269400 , TraesCS1A02G269400 , TraesCS2B02G626100 , TraesCS7D02G139600 , TraesCS3D02G375900 , TraesCS3B02G414900 , TraesCS1D02G269500 , TraesCS1B02G280100 , TraesCS1B02G279900 , TraesCS3B02G415200 , TraesCS3D02G375800 , TraesCS2B02G626600 , TraesCS3D02G375200 , TraesCS3A02G382900 , TraesCS3D02G375700 , TraesCS1A02G269500 , TraesCS2B02G248000 , TraesCS3B02G414800 , TraesCS1B02G225000 , TraesCS3B02G304500 , TraesCS3A02G382100 , TraesCS4D02G361500 , TraesCS1D02G269700 , TraesCS3D02G376200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G241900 GPI-anchored protein, putative, expressed -
2 Sobic.004G082000 expressed protein -
3 Sobic.005G160900 DUF593 domain containing protein, expressed -
4 Sobic.010G266100 endoglucanase, putative, expressed -
5 Sobic.006G218100 expressed protein -
6 Sobic.005G138900 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
7 Sobic.003G270700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
8 Sobic.009G236700 DUF1645 domain containing protein, putative, expressed -
9 Sobic.010G096500 expressed protein -
10 Sobic.007G184300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@aspartic proteinase-like protein 2 precursor, putative, expressed -
11 Sobic.003G122900 splicing factor 3 subunit 1, putative, expressed K12825: SF3A1, splicing factor 3A subunit 1
12 Sobic.004G188201 - -
13 Sobic.006G208300 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR20 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
14 Sobic.005G017400 ATCHX, putative, expressed -
15 Sobic.001G042400 expressed protein -
16 Sobic.002G176900 proton pump interactor, putative, expressed -
17 Sobic.004G013500 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00963: UGP2, galU, UTP--glucose-1-phosphate uridylyltransferase
18 Sobic.001G181200 - -
19 Sobic.006G115800 fasciclin domain containing protein, expressed -
20 Sobic.003G402400 zinc finger, C3HC4 type family protein, expressed -


Gene co-expression network
sample Sobic007G213200 Sobic007G213200 Sobic002G241900 Sobic002G241900 Sobic007G213200--Sobic002G241900 Sobic004G082000 Sobic004G082000 Sobic007G213200--Sobic004G082000 Sobic005G160900 Sobic005G160900 Sobic007G213200--Sobic005G160900 Sobic010G266100 Sobic010G266100 Sobic007G213200--Sobic010G266100 Sobic006G218100 Sobic006G218100 Sobic007G213200--Sobic006G218100 Sobic005G138900 Sobic005G138900 Sobic007G213200--Sobic005G138900 Sobic003G270700 Sobic003G270700 Sobic007G213200--Sobic003G270700 Sobic009G236700 Sobic009G236700 Sobic007G213200--Sobic009G236700 Sobic010G096500 Sobic010G096500 Sobic007G213200--Sobic010G096500 Sobic002G241900--Sobic007G213200 Sobic002G241900--Sobic005G160900 Sobic003G122900 Sobic003G122900 Sobic002G241900--Sobic003G122900 Sobic002G241900--Sobic005G138900 Sobic002G241900--Sobic004G082000 Sobic002G241900--Sobic003G270700 Sobic002G241900--Sobic010G096500 Sobic006G208300 Sobic006G208300 Sobic002G241900--Sobic006G208300 Sobic007G184300 Sobic007G184300 Sobic002G241900--Sobic007G184300 Sobic004G082000--Sobic009G236700 Sobic004G082000--Sobic005G138900 Sobic004G082000--Sobic007G213200 Sobic004G082000--Sobic002G241900 Sobic004G082000--Sobic005G160900 Sobic001G181200 Sobic001G181200 Sobic004G082000--Sobic001G181200 Sobic004G082000--Sobic010G266100 Sobic004G082000--Sobic003G122900 Sobic004G082000--Sobic006G218100 Sobic005G160900--Sobic007G213200 Sobic005G160900--Sobic002G241900 Sobic005G160900--Sobic006G218100 Sobic005G160900--Sobic010G096500 Sobic005G160900--Sobic004G082000 Sobic005G160900--Sobic003G270700 Sobic005G160900--Sobic003G122900 Sobic005G160900--Sobic005G138900 Sobic005G160900--Sobic007G184300 Sobic010G266100--Sobic007G213200 Sobic002G176900 Sobic002G176900 Sobic010G266100--Sobic002G176900 Sobic010G266100--Sobic004G082000 Sobic010G266100--Sobic006G218100 Sobic010G266100--Sobic003G270700 Sobic010G266100--Sobic009G236700 Sobic010G266100--Sobic002G241900 Sobic010G266100--Sobic010G096500 Sobic010G266100--Sobic007G184300 Sobic006G218100--Sobic007G213200 Sobic006G218100--Sobic005G160900 Sobic006G218100--Sobic007G184300 Sobic006G218100--Sobic002G241900 Sobic006G218100--Sobic003G270700 Sobic006G218100--Sobic010G096500 Sobic006G218100--Sobic005G138900 Sobic006G218100--Sobic010G266100 Sobic001G536200 Sobic001G536200 Sobic006G218100--Sobic001G536200 Sobic005G138900--Sobic004G082000 Sobic005G138900--Sobic002G241900 Sobic005G138900--Sobic007G213200 Sobic005G138900--Sobic009G236700 Sobic005G138900--Sobic006G218100 Sobic005G138900--Sobic005G160900 Sobic005G017400 Sobic005G017400 Sobic005G138900--Sobic005G017400 Sobic005G138900--Sobic003G122900 Sobic005G138900--Sobic007G184300 Sobic003G270700--Sobic010G096500 Sobic003G270700--Sobic007G184300 Sobic003G270700--Sobic002G241900 Sobic003G270700--Sobic007G213200 Sobic003G270700--Sobic006G218100 Sobic001G541601 Sobic001G541601 Sobic003G270700--Sobic001G541601 Sobic003G270700--Sobic005G160900 Sobic006G115800 Sobic006G115800 Sobic003G270700--Sobic006G115800 Sobic006G264700 Sobic006G264700 Sobic003G270700--Sobic006G264700 Sobic009G236700--Sobic004G082000 Sobic009G236700--Sobic007G213200 Sobic009G236700--Sobic005G138900 Sobic003G084800 Sobic003G084800 Sobic009G236700--Sobic003G084800 Sobic001G042400 Sobic001G042400 Sobic009G236700--Sobic001G042400 Sobic009G236700--Sobic010G266100 Sobic009G236700--Sobic002G241900 Sobic010G256433 Sobic010G256433 Sobic009G236700--Sobic010G256433 Sobic009G236700--Sobic005G160900 Sobic010G096500--Sobic003G270700 Sobic010G096500--Sobic007G184300 Sobic010G096500--Sobic002G241900 Sobic010G096500--Sobic007G213200 Sobic010G096500--Sobic005G160900 Sobic010G096500--Sobic001G541601 Sobic010G096500--Sobic006G218100 Sobic010G096500--Sobic006G115800 Sobic010G096500--Sobic006G264700
Octagon: transcription factors


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