Gene annotation
Transcriptome id Sobic.002G241900.1
Synonym LLG1, Sb02g027890
Functional annotation GPI-anchored protein, putative, expressed
UniProt C5X3S3
Pfam -
Panther DB PTHR31533 PTHR31533:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G56170 : LORELEI-LIKE-GPI-ANCHORED PROTEIN 1
RAP-DB (Rice) LOC_Os09g12620.1 : GPI-anchored protein, putative, expressed
MaizeGDB (Corn) Zm00025a047397
Brachypodium KQK23398
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G213200 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
2 Sobic.005G160900 DUF593 domain containing protein, expressed -
3 Sobic.003G122900 splicing factor 3 subunit 1, putative, expressed K12825: SF3A1, splicing factor 3A subunit 1
4 Sobic.005G138900 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
5 Sobic.004G082000 expressed protein -
6 Sobic.003G270700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
7 Sobic.010G096500 expressed protein -
8 Sobic.006G208300 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR20 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
9 Sobic.007G184300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@aspartic proteinase-like protein 2 precursor, putative, expressed -
10 Sobic.006G115800 fasciclin domain containing protein, expressed -
11 Sobic.005G017400 ATCHX, putative, expressed -
12 Sobic.006G218100 expressed protein -
13 Sobic.001G332400 DUF1336 domain containing protein, expressed -
14 Sobic.001G167600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
15 Sobic.006G095700 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
16 Sobic.001G156800 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
17 Sobic.004G261700 ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed -
18 Sobic.001G315000 fringe-related protein, putative, expressed -
19 Sobic.006G028600 OsSub40 - Putative Subtilisin homologue, expressed -
20 Sobic.004G002300 START domain containing protein, expressed -


Gene co-expression network
sample Sobic002G241900 Sobic002G241900 Sobic007G213200 Sobic007G213200 Sobic002G241900--Sobic007G213200 Sobic005G160900 Sobic005G160900 Sobic002G241900--Sobic005G160900 Sobic003G122900 Sobic003G122900 Sobic002G241900--Sobic003G122900 Sobic005G138900 Sobic005G138900 Sobic002G241900--Sobic005G138900 Sobic004G082000 Sobic004G082000 Sobic002G241900--Sobic004G082000 Sobic003G270700 Sobic003G270700 Sobic002G241900--Sobic003G270700 Sobic010G096500 Sobic010G096500 Sobic002G241900--Sobic010G096500 Sobic006G208300 Sobic006G208300 Sobic002G241900--Sobic006G208300 Sobic007G184300 Sobic007G184300 Sobic002G241900--Sobic007G184300 Sobic007G213200--Sobic002G241900 Sobic007G213200--Sobic004G082000 Sobic007G213200--Sobic005G160900 Sobic010G266100 Sobic010G266100 Sobic007G213200--Sobic010G266100 Sobic006G218100 Sobic006G218100 Sobic007G213200--Sobic006G218100 Sobic007G213200--Sobic005G138900 Sobic007G213200--Sobic003G270700 Sobic009G236700 Sobic009G236700 Sobic007G213200--Sobic009G236700 Sobic007G213200--Sobic010G096500 Sobic005G160900--Sobic007G213200 Sobic005G160900--Sobic002G241900 Sobic005G160900--Sobic006G218100 Sobic005G160900--Sobic010G096500 Sobic005G160900--Sobic004G082000 Sobic005G160900--Sobic003G270700 Sobic005G160900--Sobic003G122900 Sobic005G160900--Sobic005G138900 Sobic005G160900--Sobic007G184300 Sobic003G122900--Sobic002G241900 Sobic003G122900--Sobic006G208300 Sobic001G167600 Sobic001G167600 Sobic003G122900--Sobic001G167600 Sobic001G156800 Sobic001G156800 Sobic003G122900--Sobic001G156800 Sobic006G097400 Sobic006G097400 Sobic003G122900--Sobic006G097400 Sobic006G095700 Sobic006G095700 Sobic003G122900--Sobic006G095700 Sobic001G068066 Sobic001G068066 Sobic003G122900--Sobic001G068066 Sobic006G074150 Sobic006G074150 Sobic003G122900--Sobic006G074150 Sobic001G332400 Sobic001G332400 Sobic003G122900--Sobic001G332400 Sobic005G138900--Sobic004G082000 Sobic005G138900--Sobic002G241900 Sobic005G138900--Sobic007G213200 Sobic005G138900--Sobic009G236700 Sobic005G138900--Sobic006G218100 Sobic005G138900--Sobic005G160900 Sobic005G017400 Sobic005G017400 Sobic005G138900--Sobic005G017400 Sobic005G138900--Sobic003G122900 Sobic005G138900--Sobic007G184300 Sobic004G082000--Sobic009G236700 Sobic004G082000--Sobic005G138900 Sobic004G082000--Sobic007G213200 Sobic004G082000--Sobic002G241900 Sobic004G082000--Sobic005G160900 Sobic001G181200 Sobic001G181200 Sobic004G082000--Sobic001G181200 Sobic004G082000--Sobic010G266100 Sobic004G082000--Sobic003G122900 Sobic004G082000--Sobic006G218100 Sobic003G270700--Sobic010G096500 Sobic003G270700--Sobic007G184300 Sobic003G270700--Sobic002G241900 Sobic003G270700--Sobic007G213200 Sobic003G270700--Sobic006G218100 Sobic001G541601 Sobic001G541601 Sobic003G270700--Sobic001G541601 Sobic003G270700--Sobic005G160900 Sobic006G115800 Sobic006G115800 Sobic003G270700--Sobic006G115800 Sobic006G264700 Sobic006G264700 Sobic003G270700--Sobic006G264700 Sobic010G096500--Sobic003G270700 Sobic010G096500--Sobic007G184300 Sobic010G096500--Sobic002G241900 Sobic010G096500--Sobic007G213200 Sobic010G096500--Sobic005G160900 Sobic010G096500--Sobic001G541601 Sobic010G096500--Sobic006G218100 Sobic010G096500--Sobic006G115800 Sobic010G096500--Sobic006G264700 Sobic006G208300--Sobic001G156800 Sobic008G055600 Sobic008G055600 Sobic006G208300--Sobic008G055600 Sobic005G144000 Sobic005G144000 Sobic006G208300--Sobic005G144000 Sobic001G279000 Sobic001G279000 Sobic006G208300--Sobic001G279000 Sobic009G242200 Sobic009G242200 Sobic006G208300--Sobic009G242200 Sobic006G208300--Sobic006G095700 Sobic006G208300--Sobic001G167600 Sobic001G112600 Sobic001G112600 Sobic006G208300--Sobic001G112600 Sobic006G208300--Sobic003G122900 Sobic007G184300--Sobic003G270700 Sobic007G184300--Sobic010G096500 Sobic007G184300--Sobic006G218100 Sobic007G184300--Sobic002G241900 Sobic004G323500 Sobic004G323500 Sobic007G184300--Sobic004G323500 Sobic007G184300--Sobic006G115800 Sobic007G184300--Sobic006G264700 Sobic007G184300--Sobic007G213200 Sobic007G184300--Sobic005G160900
Octagon: transcription factors


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