Gene annotation
Transcriptome id Sobic.005G138900.1
Synonym Sb05g020320
Functional annotation zinc finger DHHC domain-containing protein, putative, expressed
UniProt C5Y3R2
Pfam PF01529
Panther DB PTHR22883 PTHR22883:SF60
NCBI CDD KOG1311; DHHC-type Zn-finger proteins
KEGG Orthology K16675; palmitoyltransferase ZDHHC9/14/18
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT3G26935 : DHHC-type zinc finger family protein
RAP-DB (Rice) LOC_Os11g32960.1 : zinc finger DHHC domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a024153 , Zm00025a033574 , Zm00025a015704
Brachypodium KQJ88329
Barley -
Wheat TraesCS4A02G191900 , TraesCS4D02G121600 , TraesCS4B02G123500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G082000 expressed protein -
2 Sobic.002G241900 GPI-anchored protein, putative, expressed -
3 Sobic.007G213200 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
4 Sobic.009G236700 DUF1645 domain containing protein, putative, expressed -
5 Sobic.006G218100 expressed protein -
6 Sobic.005G160900 DUF593 domain containing protein, expressed -
7 Sobic.005G017400 ATCHX, putative, expressed -
8 Sobic.003G122900 splicing factor 3 subunit 1, putative, expressed K12825: SF3A1, splicing factor 3A subunit 1
9 Sobic.007G184300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@aspartic proteinase-like protein 2 precursor, putative, expressed -
10 Sobic.001G332400 DUF1336 domain containing protein, expressed -
11 Sobic.010G266100 endoglucanase, putative, expressed -
12 Sobic.003G270700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
13 Sobic.006G115800 fasciclin domain containing protein, expressed -
14 Sobic.006G208300 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR20 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
15 Sobic.001G181200 - -
16 Sobic.001G042400 expressed protein -
17 Sobic.010G096500 expressed protein -
18 Sobic.002G176900 proton pump interactor, putative, expressed -
19 Sobic.010G256433 - -
20 Sobic.003G402400 zinc finger, C3HC4 type family protein, expressed -


Gene co-expression network
sample Sobic005G138900 Sobic005G138900 Sobic004G082000 Sobic004G082000 Sobic005G138900--Sobic004G082000 Sobic002G241900 Sobic002G241900 Sobic005G138900--Sobic002G241900 Sobic007G213200 Sobic007G213200 Sobic005G138900--Sobic007G213200 Sobic009G236700 Sobic009G236700 Sobic005G138900--Sobic009G236700 Sobic006G218100 Sobic006G218100 Sobic005G138900--Sobic006G218100 Sobic005G160900 Sobic005G160900 Sobic005G138900--Sobic005G160900 Sobic005G017400 Sobic005G017400 Sobic005G138900--Sobic005G017400 Sobic003G122900 Sobic003G122900 Sobic005G138900--Sobic003G122900 Sobic007G184300 Sobic007G184300 Sobic005G138900--Sobic007G184300 Sobic004G082000--Sobic009G236700 Sobic004G082000--Sobic005G138900 Sobic004G082000--Sobic007G213200 Sobic004G082000--Sobic002G241900 Sobic004G082000--Sobic005G160900 Sobic001G181200 Sobic001G181200 Sobic004G082000--Sobic001G181200 Sobic010G266100 Sobic010G266100 Sobic004G082000--Sobic010G266100 Sobic004G082000--Sobic003G122900 Sobic004G082000--Sobic006G218100 Sobic002G241900--Sobic007G213200 Sobic002G241900--Sobic005G160900 Sobic002G241900--Sobic003G122900 Sobic002G241900--Sobic005G138900 Sobic002G241900--Sobic004G082000 Sobic003G270700 Sobic003G270700 Sobic002G241900--Sobic003G270700 Sobic010G096500 Sobic010G096500 Sobic002G241900--Sobic010G096500 Sobic006G208300 Sobic006G208300 Sobic002G241900--Sobic006G208300 Sobic002G241900--Sobic007G184300 Sobic007G213200--Sobic002G241900 Sobic007G213200--Sobic004G082000 Sobic007G213200--Sobic005G160900 Sobic007G213200--Sobic010G266100 Sobic007G213200--Sobic006G218100 Sobic007G213200--Sobic005G138900 Sobic007G213200--Sobic003G270700 Sobic007G213200--Sobic009G236700 Sobic007G213200--Sobic010G096500 Sobic009G236700--Sobic004G082000 Sobic009G236700--Sobic007G213200 Sobic009G236700--Sobic005G138900 Sobic003G084800 Sobic003G084800 Sobic009G236700--Sobic003G084800 Sobic001G042400 Sobic001G042400 Sobic009G236700--Sobic001G042400 Sobic009G236700--Sobic010G266100 Sobic009G236700--Sobic002G241900 Sobic010G256433 Sobic010G256433 Sobic009G236700--Sobic010G256433 Sobic009G236700--Sobic005G160900 Sobic006G218100--Sobic007G213200 Sobic006G218100--Sobic005G160900 Sobic006G218100--Sobic007G184300 Sobic006G218100--Sobic002G241900 Sobic006G218100--Sobic003G270700 Sobic006G218100--Sobic010G096500 Sobic006G218100--Sobic005G138900 Sobic006G218100--Sobic010G266100 Sobic001G536200 Sobic001G536200 Sobic006G218100--Sobic001G536200 Sobic005G160900--Sobic007G213200 Sobic005G160900--Sobic002G241900 Sobic005G160900--Sobic006G218100 Sobic005G160900--Sobic010G096500 Sobic005G160900--Sobic004G082000 Sobic005G160900--Sobic003G270700 Sobic005G160900--Sobic003G122900 Sobic005G160900--Sobic005G138900 Sobic005G160900--Sobic007G184300 Sobic001G332400 Sobic001G332400 Sobic005G017400--Sobic001G332400 Sobic002G061732 Sobic002G061732 Sobic005G017400--Sobic002G061732 Sobic005G199800 Sobic005G199800 Sobic005G017400--Sobic005G199800 Sobic009G072600 Sobic009G072600 Sobic005G017400--Sobic009G072600 Sobic004G057000 Sobic004G057000 Sobic005G017400--Sobic004G057000 Sobic010G158050 Sobic010G158050 Sobic005G017400--Sobic010G158050 Sobic002G323200 Sobic002G323200 Sobic005G017400--Sobic002G323200 Sobic005G192000 Sobic005G192000 Sobic005G017400--Sobic005G192000 Sobic010G157900 Sobic010G157900 Sobic005G017400--Sobic010G157900 Sobic003G122900--Sobic002G241900 Sobic003G122900--Sobic006G208300 Sobic001G167600 Sobic001G167600 Sobic003G122900--Sobic001G167600 Sobic001G156800 Sobic001G156800 Sobic003G122900--Sobic001G156800 Sobic006G097400 Sobic006G097400 Sobic003G122900--Sobic006G097400 Sobic006G095700 Sobic006G095700 Sobic003G122900--Sobic006G095700 Sobic001G068066 Sobic001G068066 Sobic003G122900--Sobic001G068066 Sobic006G074150 Sobic006G074150 Sobic003G122900--Sobic006G074150 Sobic003G122900--Sobic001G332400 Sobic007G184300--Sobic003G270700 Sobic007G184300--Sobic010G096500 Sobic007G184300--Sobic006G218100 Sobic007G184300--Sobic002G241900 Sobic004G323500 Sobic004G323500 Sobic007G184300--Sobic004G323500 Sobic006G115800 Sobic006G115800 Sobic007G184300--Sobic006G115800 Sobic006G264700 Sobic006G264700 Sobic007G184300--Sobic006G264700 Sobic007G184300--Sobic007G213200 Sobic007G184300--Sobic005G160900
Octagon: transcription factors


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