Gene annotation
Transcriptome id Sobic.004G082000.1
Synonym Sb04g006760
Functional annotation expressed protein
UniProt A0A1Z5RLF4
Pfam PF05910
Panther DB PTHR31972 PTHR31972:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12690 : Plant protein of unknown function (DUF868)
RAP-DB (Rice) LOC_Os02g10530.1 : expressed protein
MaizeGDB (Corn) Zm00025a019586 , Zm00025a034644 , Zm00025a026339
Brachypodium KQJ93891
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G236700 DUF1645 domain containing protein, putative, expressed -
2 Sobic.005G138900 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
3 Sobic.007G213200 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
4 Sobic.002G241900 GPI-anchored protein, putative, expressed -
5 Sobic.005G160900 DUF593 domain containing protein, expressed -
6 Sobic.001G181200 - -
7 Sobic.010G266100 endoglucanase, putative, expressed -
8 Sobic.003G122900 splicing factor 3 subunit 1, putative, expressed K12825: SF3A1, splicing factor 3A subunit 1
9 Sobic.006G218100 expressed protein -
10 Sobic.005G017400 ATCHX, putative, expressed -
11 Sobic.001G042400 expressed protein -
12 Sobic.006G208300 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR20 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
13 Sobic.003G270700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
14 Sobic.010G096500 expressed protein -
15 Sobic.001G332400 DUF1336 domain containing protein, expressed -
16 Sobic.010G256433 - -
17 Sobic.003G084800 expressed protein -
18 Sobic.007G184300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@aspartic proteinase-like protein 2 precursor, putative, expressed -
19 Sobic.001G483900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase protein, putative, expressed -
20 Sobic.001G167600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G082000 Sobic004G082000 Sobic009G236700 Sobic009G236700 Sobic004G082000--Sobic009G236700 Sobic005G138900 Sobic005G138900 Sobic004G082000--Sobic005G138900 Sobic007G213200 Sobic007G213200 Sobic004G082000--Sobic007G213200 Sobic002G241900 Sobic002G241900 Sobic004G082000--Sobic002G241900 Sobic005G160900 Sobic005G160900 Sobic004G082000--Sobic005G160900 Sobic001G181200 Sobic001G181200 Sobic004G082000--Sobic001G181200 Sobic010G266100 Sobic010G266100 Sobic004G082000--Sobic010G266100 Sobic003G122900 Sobic003G122900 Sobic004G082000--Sobic003G122900 Sobic006G218100 Sobic006G218100 Sobic004G082000--Sobic006G218100 Sobic009G236700--Sobic004G082000 Sobic009G236700--Sobic007G213200 Sobic009G236700--Sobic005G138900 Sobic003G084800 Sobic003G084800 Sobic009G236700--Sobic003G084800 Sobic001G042400 Sobic001G042400 Sobic009G236700--Sobic001G042400 Sobic009G236700--Sobic010G266100 Sobic009G236700--Sobic002G241900 Sobic010G256433 Sobic010G256433 Sobic009G236700--Sobic010G256433 Sobic009G236700--Sobic005G160900 Sobic005G138900--Sobic004G082000 Sobic005G138900--Sobic002G241900 Sobic005G138900--Sobic007G213200 Sobic005G138900--Sobic009G236700 Sobic005G138900--Sobic006G218100 Sobic005G138900--Sobic005G160900 Sobic005G017400 Sobic005G017400 Sobic005G138900--Sobic005G017400 Sobic005G138900--Sobic003G122900 Sobic007G184300 Sobic007G184300 Sobic005G138900--Sobic007G184300 Sobic007G213200--Sobic002G241900 Sobic007G213200--Sobic004G082000 Sobic007G213200--Sobic005G160900 Sobic007G213200--Sobic010G266100 Sobic007G213200--Sobic006G218100 Sobic007G213200--Sobic005G138900 Sobic003G270700 Sobic003G270700 Sobic007G213200--Sobic003G270700 Sobic007G213200--Sobic009G236700 Sobic010G096500 Sobic010G096500 Sobic007G213200--Sobic010G096500 Sobic002G241900--Sobic007G213200 Sobic002G241900--Sobic005G160900 Sobic002G241900--Sobic003G122900 Sobic002G241900--Sobic005G138900 Sobic002G241900--Sobic004G082000 Sobic002G241900--Sobic003G270700 Sobic002G241900--Sobic010G096500 Sobic006G208300 Sobic006G208300 Sobic002G241900--Sobic006G208300 Sobic002G241900--Sobic007G184300 Sobic005G160900--Sobic007G213200 Sobic005G160900--Sobic002G241900 Sobic005G160900--Sobic006G218100 Sobic005G160900--Sobic010G096500 Sobic005G160900--Sobic004G082000 Sobic005G160900--Sobic003G270700 Sobic005G160900--Sobic003G122900 Sobic005G160900--Sobic005G138900 Sobic005G160900--Sobic007G184300 Sobic001G181200--Sobic004G082000 Sobic001G181200--Sobic009G236700 Sobic001G181200--Sobic010G266100 Sobic001G181200--Sobic005G138900 Sobic004G327900 Sobic004G327900 Sobic001G181200--Sobic004G327900 Sobic001G181200--Sobic007G213200 Sobic007G009900 Sobic007G009900 Sobic001G181200--Sobic007G009900 Sobic001G181200--Sobic002G241900 Sobic002G176900 Sobic002G176900 Sobic001G181200--Sobic002G176900 Sobic010G266100--Sobic007G213200 Sobic010G266100--Sobic002G176900 Sobic010G266100--Sobic004G082000 Sobic010G266100--Sobic006G218100 Sobic010G266100--Sobic003G270700 Sobic010G266100--Sobic009G236700 Sobic010G266100--Sobic002G241900 Sobic010G266100--Sobic010G096500 Sobic010G266100--Sobic007G184300 Sobic003G122900--Sobic002G241900 Sobic003G122900--Sobic006G208300 Sobic001G167600 Sobic001G167600 Sobic003G122900--Sobic001G167600 Sobic001G156800 Sobic001G156800 Sobic003G122900--Sobic001G156800 Sobic006G097400 Sobic006G097400 Sobic003G122900--Sobic006G097400 Sobic006G095700 Sobic006G095700 Sobic003G122900--Sobic006G095700 Sobic001G068066 Sobic001G068066 Sobic003G122900--Sobic001G068066 Sobic006G074150 Sobic006G074150 Sobic003G122900--Sobic006G074150 Sobic001G332400 Sobic001G332400 Sobic003G122900--Sobic001G332400 Sobic006G218100--Sobic007G213200 Sobic006G218100--Sobic005G160900 Sobic006G218100--Sobic007G184300 Sobic006G218100--Sobic002G241900 Sobic006G218100--Sobic003G270700 Sobic006G218100--Sobic010G096500 Sobic006G218100--Sobic005G138900 Sobic006G218100--Sobic010G266100 Sobic001G536200 Sobic001G536200 Sobic006G218100--Sobic001G536200
Octagon: transcription factors


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