Gene annotation
Transcriptome id Sobic.001G167600.1
Synonym lateral organ boundaries, LBD36, ASL1, Sb01g014650, SbLBD3
Functional annotation "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments" (PubMedID : 20499123)
DUF260 domain containing protein, putative, expressed
UniProt C5WSB6
Pfam PF03195
Panther DB PTHR31301 PTHR31301:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66870 : ASYMMETRIC LEAVES 2-like 1
RAP-DB (Rice) LOC_Os03g41600.1 : DUF260 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a007408 , Zm00025a017308
Brachypodium KQK14196 , KQK14197 , KQK14195 , KQK14198 , KQK14199 , PNT74441 , PNT74440 , PNT74443 , PNT74442 , PNT74444
Barley HORVU4Hr1G080160.1 , HORVU4Hr1G080160.3 , HORVU4Hr1G080160.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G124900 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
2 Sobic.006G204400 maltose excess protein 1-like, chloroplast precursor, putative, expressed -
3 Sobic.001G106800 DUF221 domain containing protein, expressed -
4 Sobic.002G111100 expressed protein -
5 Sobic.006G097400 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
6 Sobic.001G156800 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
7 Sobic.006G095700 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
8 Sobic.008G103250 - -
9 Sobic.002G030300 - -
10 Sobic.008G136601 - -
11 Sobic.001G254000 sucrose transporters(PubMedID : 23805151)@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@sucrose transporter, putativ, expressed K15378: solute carrier family 45, member 1/2/4
12 Sobic.004G295050 - -
13 Sobic.001G165700 B3 DNA binding domain containing protein, expressed -
14 Sobic.001G269100 lysosomal alpha-mannosidase precursor, putative, expressed -
15 Sobic.003G290500 profilin domain containing protein, expressed K05759: profilin
16 Sobic.001G287400 VQ domain containing protein, putative, expressed -
17 Sobic.003G175950 - -
18 Sobic.007G014000 OsFBX142 - F-box domain containing protein, expressed -
19 Sobic.001G332000 pollen allergen, putative, expressed -
20 Sobic.009G256601 - -


Gene co-expression network
sample Sobic001G167600 Sobic001G167600 Sobic010G124900 Sobic010G124900 Sobic001G167600--Sobic010G124900 Sobic006G204400 Sobic006G204400 Sobic001G167600--Sobic006G204400 Sobic001G106800 Sobic001G106800 Sobic001G167600--Sobic001G106800 Sobic002G111100 Sobic002G111100 Sobic001G167600--Sobic002G111100 Sobic006G097400 Sobic006G097400 Sobic001G167600--Sobic006G097400 Sobic001G156800 Sobic001G156800 Sobic001G167600--Sobic001G156800 Sobic006G095700 Sobic006G095700 Sobic001G167600--Sobic006G095700 Sobic008G103250 Sobic008G103250 Sobic001G167600--Sobic008G103250 Sobic002G030300 Sobic002G030300 Sobic001G167600--Sobic002G030300 Sobic010G124900--Sobic002G111100 Sobic010G124900--Sobic001G106800 Sobic010G124900--Sobic006G204400 Sobic010G124900--Sobic008G103250 Sobic010G124900--Sobic001G167600 Sobic005G170300 Sobic005G170300 Sobic010G124900--Sobic005G170300 Sobic001G254000 Sobic001G254000 Sobic010G124900--Sobic001G254000 Sobic010G124900--Sobic002G030300 Sobic002G372000 Sobic002G372000 Sobic010G124900--Sobic002G372000 Sobic006G204400--Sobic001G106800 Sobic006G001100 Sobic006G001100 Sobic006G204400--Sobic006G001100 Sobic007G176900 Sobic007G176900 Sobic006G204400--Sobic007G176900 Sobic008G136601 Sobic008G136601 Sobic006G204400--Sobic008G136601 Sobic006G204400--Sobic006G097400 Sobic006G204400--Sobic002G111100 Sobic001G163666 Sobic001G163666 Sobic006G204400--Sobic001G163666 Sobic006G204400--Sobic008G103250 Sobic001G241401 Sobic001G241401 Sobic006G204400--Sobic001G241401 Sobic001G106800--Sobic002G030300 Sobic001G106800--Sobic002G111100 Sobic002G011300 Sobic002G011300 Sobic001G106800--Sobic002G011300 Sobic009G060000 Sobic009G060000 Sobic001G106800--Sobic009G060000 Sobic003G290500 Sobic003G290500 Sobic001G106800--Sobic003G290500 Sobic001G409000 Sobic001G409000 Sobic001G106800--Sobic001G409000 Sobic007G001800 Sobic007G001800 Sobic001G106800--Sobic007G001800 Sobic004G217200 Sobic004G217200 Sobic001G106800--Sobic004G217200 Sobic004G049300 Sobic004G049300 Sobic001G106800--Sobic004G049300 Sobic002G111100--Sobic001G106800 Sobic002G111100--Sobic002G030300 Sobic002G111100--Sobic002G372000 Sobic002G111100--Sobic001G254000 Sobic002G384500 Sobic002G384500 Sobic002G111100--Sobic002G384500 Sobic008G056700 Sobic008G056700 Sobic002G111100--Sobic008G056700 Sobic002G111100--Sobic010G124900 Sobic003G243300 Sobic003G243300 Sobic002G111100--Sobic003G243300 Sobic002G295800 Sobic002G295800 Sobic002G111100--Sobic002G295800 Sobic007G129800 Sobic007G129800 Sobic006G097400--Sobic007G129800 Sobic010G107800 Sobic010G107800 Sobic006G097400--Sobic010G107800 Sobic002G414300 Sobic002G414300 Sobic006G097400--Sobic002G414300 Sobic005G054401 Sobic005G054401 Sobic006G097400--Sobic005G054401 Sobic001G269700 Sobic001G269700 Sobic006G097400--Sobic001G269700 Sobic001G269600 Sobic001G269600 Sobic006G097400--Sobic001G269600 Sobic001G269200 Sobic001G269200 Sobic006G097400--Sobic001G269200 Sobic001G269400 Sobic001G269400 Sobic006G097400--Sobic001G269400 Sobic001G094700 Sobic001G094700 Sobic006G097400--Sobic001G094700 Sobic001G156800--Sobic003G290500 Sobic001G192300 Sobic001G192300 Sobic001G156800--Sobic001G192300 Sobic002G380300 Sobic002G380300 Sobic001G156800--Sobic002G380300 Sobic004G290500 Sobic004G290500 Sobic001G156800--Sobic004G290500 Sobic006G105100 Sobic006G105100 Sobic001G156800--Sobic006G105100 Sobic010G216100 Sobic010G216100 Sobic001G156800--Sobic010G216100 Sobic006G069766 Sobic006G069766 Sobic001G156800--Sobic006G069766 Sobic007G035200 Sobic007G035200 Sobic001G156800--Sobic007G035200 Sobic005G006400 Sobic005G006400 Sobic001G156800--Sobic005G006400 Sobic002G283000 Sobic002G283000 Sobic006G095700--Sobic002G283000 Sobic004G137200 Sobic004G137200 Sobic006G095700--Sobic004G137200 Sobic001G540000 Sobic001G540000 Sobic006G095700--Sobic001G540000 Sobic004G025600 Sobic004G025600 Sobic006G095700--Sobic004G025600 Sobic002G091200 Sobic002G091200 Sobic006G095700--Sobic002G091200 Sobic002G106800 Sobic002G106800 Sobic006G095700--Sobic002G106800 Sobic003G173800 Sobic003G173800 Sobic006G095700--Sobic003G173800 Sobic009G098900 Sobic009G098900 Sobic006G095700--Sobic009G098900 Sobic005G010000 Sobic005G010000 Sobic006G095700--Sobic005G010000 Sobic008G103250--Sobic005G170300 Sobic008G103250--Sobic001G094700 Sobic001G228000 Sobic001G228000 Sobic002G030300--Sobic001G228000 Sobic002G197900 Sobic002G197900 Sobic002G030300--Sobic002G197900 Sobic003G164700 Sobic003G164700 Sobic002G030300--Sobic003G164700 Sobic007G057600 Sobic007G057600 Sobic002G030300--Sobic007G057600 Sobic008G119501 Sobic008G119501 Sobic002G030300--Sobic008G119501 Sobic006G237700 Sobic006G237700 Sobic002G030300--Sobic006G237700 Sobic003G335200 Sobic003G335200 Sobic002G030300--Sobic003G335200 Sobic004G134000 Sobic004G134000 Sobic002G030300--Sobic004G134000 Sobic003G073540 Sobic003G073540 Sobic002G030300--Sobic003G073540
Octagon: transcription factors


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