Gene annotation
Transcriptome id Sobic.010G124900.1
Synonym Sb10g011020, YBR159, ATKCR1, KCR1
Functional annotation oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed
UniProt C5Z940
Pfam PF13561
Panther DB PTHR24322:SF436 PTHR24322
NCBI CDD KOG1014; 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3
KEGG Orthology K10251; HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67730 : beta-ketoacyl reductase 1
RAP-DB (Rice) LOC_Os04g02620.1 : oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed
MaizeGDB (Corn) Zm00025a050550
Brachypodium -
Barley -
Wheat TraesCS7D02G221200
Populus -


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cDNA sequences
Sobic.010G124900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G111100 expressed protein -
2 Sobic.001G106800 DUF221 domain containing protein, expressed -
3 Sobic.006G204400 maltose excess protein 1-like, chloroplast precursor, putative, expressed -
4 Sobic.008G103250 - -
5 Sobic.001G167600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
6 Sobic.005G170300 OsFBDUF56 - F-box and DUF domain containing protein, expressed -
7 Sobic.001G254000 sucrose transporters(PubMedID : 23805151)@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@sucrose transporter, putativ, expressed K15378: solute carrier family 45, member 1/2/4
8 Sobic.002G030300 - -
9 Sobic.002G372000 - -
10 Sobic.008G136601 - -
11 Sobic.004G103901 - -
12 Sobic.003G290500 profilin domain containing protein, expressed K05759: profilin
13 Sobic.003G243300 expressed protein -
14 Sobic.002G295800 STRUBBELIG-RECEPTOR FAMILY 5 precursor, putative, expressed -
15 Sobic.003G400000 signal peptide peptidase-like 2B, putative, expressed -
16 Sobic.007G222400 - -
17 Sobic.007G222500 - -
18 Sobic.003G073540 - -
19 Sobic.005G187600 - -
20 Sobic.004G029032 - -


Gene co-expression network
sample Sobic010G124900 Sobic010G124900 Sobic002G111100 Sobic002G111100 Sobic010G124900--Sobic002G111100 Sobic001G106800 Sobic001G106800 Sobic010G124900--Sobic001G106800 Sobic006G204400 Sobic006G204400 Sobic010G124900--Sobic006G204400 Sobic008G103250 Sobic008G103250 Sobic010G124900--Sobic008G103250 Sobic001G167600 Sobic001G167600 Sobic010G124900--Sobic001G167600 Sobic005G170300 Sobic005G170300 Sobic010G124900--Sobic005G170300 Sobic001G254000 Sobic001G254000 Sobic010G124900--Sobic001G254000 Sobic002G030300 Sobic002G030300 Sobic010G124900--Sobic002G030300 Sobic002G372000 Sobic002G372000 Sobic010G124900--Sobic002G372000 Sobic002G111100--Sobic001G106800 Sobic002G111100--Sobic002G030300 Sobic002G111100--Sobic002G372000 Sobic002G111100--Sobic001G254000 Sobic002G384500 Sobic002G384500 Sobic002G111100--Sobic002G384500 Sobic008G056700 Sobic008G056700 Sobic002G111100--Sobic008G056700 Sobic002G111100--Sobic010G124900 Sobic003G243300 Sobic003G243300 Sobic002G111100--Sobic003G243300 Sobic002G295800 Sobic002G295800 Sobic002G111100--Sobic002G295800 Sobic001G106800--Sobic002G030300 Sobic001G106800--Sobic002G111100 Sobic002G011300 Sobic002G011300 Sobic001G106800--Sobic002G011300 Sobic009G060000 Sobic009G060000 Sobic001G106800--Sobic009G060000 Sobic003G290500 Sobic003G290500 Sobic001G106800--Sobic003G290500 Sobic001G409000 Sobic001G409000 Sobic001G106800--Sobic001G409000 Sobic007G001800 Sobic007G001800 Sobic001G106800--Sobic007G001800 Sobic004G217200 Sobic004G217200 Sobic001G106800--Sobic004G217200 Sobic004G049300 Sobic004G049300 Sobic001G106800--Sobic004G049300 Sobic006G204400--Sobic001G106800 Sobic006G001100 Sobic006G001100 Sobic006G204400--Sobic006G001100 Sobic007G176900 Sobic007G176900 Sobic006G204400--Sobic007G176900 Sobic008G136601 Sobic008G136601 Sobic006G204400--Sobic008G136601 Sobic006G097400 Sobic006G097400 Sobic006G204400--Sobic006G097400 Sobic006G204400--Sobic002G111100 Sobic001G163666 Sobic001G163666 Sobic006G204400--Sobic001G163666 Sobic006G204400--Sobic008G103250 Sobic001G241401 Sobic001G241401 Sobic006G204400--Sobic001G241401 Sobic008G103250--Sobic005G170300 Sobic001G094700 Sobic001G094700 Sobic008G103250--Sobic001G094700 Sobic001G167600--Sobic010G124900 Sobic001G167600--Sobic006G204400 Sobic001G167600--Sobic001G106800 Sobic001G167600--Sobic002G111100 Sobic001G167600--Sobic006G097400 Sobic001G156800 Sobic001G156800 Sobic001G167600--Sobic001G156800 Sobic006G095700 Sobic006G095700 Sobic001G167600--Sobic006G095700 Sobic001G167600--Sobic008G103250 Sobic001G167600--Sobic002G030300 Sobic005G170300--Sobic008G103250 Sobic004G103901 Sobic004G103901 Sobic005G170300--Sobic004G103901 Sobic005G170300--Sobic001G094700 Sobic009G016700 Sobic009G016700 Sobic001G254000--Sobic009G016700 Sobic007G222400 Sobic007G222400 Sobic001G254000--Sobic007G222400 Sobic002G283000 Sobic002G283000 Sobic001G254000--Sobic002G283000 Sobic009G089532 Sobic009G089532 Sobic001G254000--Sobic009G089532 Sobic009G096700 Sobic009G096700 Sobic001G254000--Sobic009G096700 Sobic002G002600 Sobic002G002600 Sobic001G254000--Sobic002G002600 Sobic001G539700 Sobic001G539700 Sobic001G254000--Sobic001G539700 Sobic002G106800 Sobic002G106800 Sobic001G254000--Sobic002G106800 Sobic008G028100 Sobic008G028100 Sobic001G254000--Sobic008G028100 Sobic001G228000 Sobic001G228000 Sobic002G030300--Sobic001G228000 Sobic002G197900 Sobic002G197900 Sobic002G030300--Sobic002G197900 Sobic003G164700 Sobic003G164700 Sobic002G030300--Sobic003G164700 Sobic007G057600 Sobic007G057600 Sobic002G030300--Sobic007G057600 Sobic008G119501 Sobic008G119501 Sobic002G030300--Sobic008G119501 Sobic006G237700 Sobic006G237700 Sobic002G030300--Sobic006G237700 Sobic003G335200 Sobic003G335200 Sobic002G030300--Sobic003G335200 Sobic004G134000 Sobic004G134000 Sobic002G030300--Sobic004G134000 Sobic003G073540 Sobic003G073540 Sobic002G030300--Sobic003G073540 Sobic010G001200 Sobic010G001200 Sobic002G372000--Sobic010G001200 Sobic002G372000--Sobic002G384500 Sobic004G273600 Sobic004G273600 Sobic002G372000--Sobic004G273600 Sobic005G092100 Sobic005G092100 Sobic002G372000--Sobic005G092100 Sobic002G279900 Sobic002G279900 Sobic002G372000--Sobic002G279900 Sobic006G022700 Sobic006G022700 Sobic002G372000--Sobic006G022700 Sobic002G372000--Sobic002G295800 Sobic002G125100 Sobic002G125100 Sobic002G372000--Sobic002G125100 Sobic004G071900 Sobic004G071900 Sobic002G372000--Sobic004G071900
Octagon: transcription factors


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