Gene annotation
Transcriptome id Sobic.001G483900.1
Synonym Sb01g045290
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
hydrolase protein, putative, expressed
UniProt A0A1B6QQ69
Pfam PF12697
Panther DB PTHR10992 PTHR10992:SF828
NCBI CDD KOG1454; Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09430 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os03g08110.1 : hydrolase protein, putative, expressed
MaizeGDB (Corn) Zm00025a000912 , Zm00025a048793
Brachypodium KQK15227
Barley HORVU0Hr1G009060.6 , HORVU0Hr1G009060.3 , HORVU0Hr1G009060.2 , HORVU0Hr1G009060.1 , HORVU0Hr1G009060.5 , HORVU0Hr1G009060.4
Wheat TraesCS4A02G010400 , TraesCS4D02G292800 , TraesCS4B02G294000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G098700 basic helix-loop-helix domain containing protein, expressed -
2 Sobic.001G485700 DAG protein, chloroplast precursor, putative, expressed -
3 Sobic.006G208300 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR20 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
4 Sobic.001G183666 - -
5 Sobic.001G130600 galactosyltransferase family protein, putative, expressed -
6 Sobic.003G407700 dnaJ domain containing protein, expressed -
7 Sobic.010G073900 expressed protein -
8 Sobic.003G009000 harpin-induced protein, putative, expressed -
9 Sobic.002G199800 - -
10 Sobic.006G239500 plant protein of unknown function domain containing protein, expressed -
11 Sobic.010G128350 - -
12 Sobic.006G077050 - -
13 Sobic.002G309100 phosphate-induced protein 1 conserved region domain containing protein, expressed -
14 Sobic.001G165901 - -
15 Sobic.004G349600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
16 Sobic.010G005100 ethylene-responsive element-binding protein, putative, expressed -
17 Sobic.009G238650 - -
18 Sobic.003G293100 GATA zinc finger domain containing protein, expressed -
19 Sobic.002G241900 GPI-anchored protein, putative, expressed -
20 Sobic.005G120400 CBS domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G483900 Sobic001G483900 Sobic009G098700 Sobic009G098700 Sobic001G483900--Sobic009G098700 Sobic001G485700 Sobic001G485700 Sobic001G483900--Sobic001G485700 Sobic006G208300 Sobic006G208300 Sobic001G483900--Sobic006G208300 Sobic001G183666 Sobic001G183666 Sobic001G483900--Sobic001G183666 Sobic001G130600 Sobic001G130600 Sobic001G483900--Sobic001G130600 Sobic003G407700 Sobic003G407700 Sobic001G483900--Sobic003G407700 Sobic010G073900 Sobic010G073900 Sobic001G483900--Sobic010G073900 Sobic003G009000 Sobic003G009000 Sobic001G483900--Sobic003G009000 Sobic002G199800 Sobic002G199800 Sobic001G483900--Sobic002G199800 Sobic006G239500 Sobic006G239500 Sobic009G098700--Sobic006G239500 Sobic009G098700--Sobic002G199800 Sobic009G098700--Sobic010G073900 Sobic009G098700--Sobic003G407700 Sobic009G098700--Sobic003G009000 Sobic005G120400 Sobic005G120400 Sobic009G098700--Sobic005G120400 Sobic004G349600 Sobic004G349600 Sobic009G098700--Sobic004G349600 Sobic010G128350 Sobic010G128350 Sobic009G098700--Sobic010G128350 Sobic009G238650 Sobic009G238650 Sobic009G098700--Sobic009G238650 Sobic001G485700--Sobic001G130600 Sobic001G485700--Sobic010G073900 Sobic010G166800 Sobic010G166800 Sobic001G485700--Sobic010G166800 Sobic001G485700--Sobic003G407700 Sobic001G485700--Sobic003G009000 Sobic001G485700--Sobic009G098700 Sobic006G114100 Sobic006G114100 Sobic001G485700--Sobic006G114100 Sobic001G485700--Sobic002G199800 Sobic010G252100 Sobic010G252100 Sobic001G485700--Sobic010G252100 Sobic001G156800 Sobic001G156800 Sobic006G208300--Sobic001G156800 Sobic008G055600 Sobic008G055600 Sobic006G208300--Sobic008G055600 Sobic005G144000 Sobic005G144000 Sobic006G208300--Sobic005G144000 Sobic001G279000 Sobic001G279000 Sobic006G208300--Sobic001G279000 Sobic009G242200 Sobic009G242200 Sobic006G208300--Sobic009G242200 Sobic006G095700 Sobic006G095700 Sobic006G208300--Sobic006G095700 Sobic001G167600 Sobic001G167600 Sobic006G208300--Sobic001G167600 Sobic001G112600 Sobic001G112600 Sobic006G208300--Sobic001G112600 Sobic003G122900 Sobic003G122900 Sobic006G208300--Sobic003G122900 Sobic001G183666--Sobic006G239500 Sobic001G183666--Sobic002G199800 Sobic001G183666--Sobic003G009000 Sobic001G183666--Sobic009G098700 Sobic001G183666--Sobic003G407700 Sobic001G183666--Sobic009G238650 Sobic001G183666--Sobic010G073900 Sobic001G183666--Sobic004G349600 Sobic006G077050 Sobic006G077050 Sobic001G183666--Sobic006G077050 Sobic001G130600--Sobic001G485700 Sobic001G130600--Sobic006G114100 Sobic001G130600--Sobic003G009000 Sobic001G130600--Sobic009G098700 Sobic001G130600--Sobic010G166800 Sobic001G130600--Sobic003G407700 Sobic001G130600--Sobic010G252100 Sobic001G130600--Sobic001G183666 Sobic001G130600--Sobic010G073900 Sobic003G407700--Sobic010G073900 Sobic003G407700--Sobic002G199800 Sobic003G407700--Sobic004G349600 Sobic003G407700--Sobic009G238650 Sobic003G407700--Sobic006G239500 Sobic009G121200 Sobic009G121200 Sobic003G407700--Sobic009G121200 Sobic003G407700--Sobic009G098700 Sobic003G407700--Sobic005G120400 Sobic001G165901 Sobic001G165901 Sobic003G407700--Sobic001G165901 Sobic010G073900--Sobic003G407700 Sobic010G073900--Sobic002G199800 Sobic010G073900--Sobic009G238650 Sobic010G073900--Sobic006G239500 Sobic010G073900--Sobic004G349600 Sobic001G322400 Sobic001G322400 Sobic010G073900--Sobic001G322400 Sobic010G073900--Sobic010G128350 Sobic010G073900--Sobic009G098700 Sobic010G073900--Sobic009G121200 Sobic003G009000--Sobic009G098700 Sobic003G009000--Sobic006G239500 Sobic003G009000--Sobic002G199800 Sobic003G009000--Sobic001G183666 Sobic003G009000--Sobic004G349600 Sobic003G009000--Sobic003G407700 Sobic003G009000--Sobic010G073900 Sobic001G257650 Sobic001G257650 Sobic003G009000--Sobic001G257650 Sobic003G009000--Sobic001G485700 Sobic002G199800--Sobic006G239500 Sobic002G199800--Sobic004G349600 Sobic002G199800--Sobic003G407700 Sobic002G199800--Sobic009G238650 Sobic002G199800--Sobic010G073900 Sobic002G199800--Sobic005G120400 Sobic002G199800--Sobic009G098700 Sobic002G199800--Sobic010G128350 Sobic002G199800--Sobic001G165901
Octagon: transcription factors


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