Gene annotation
Transcriptome id Sobic.004G261700.1,Sobic.004G261700.2
Synonym Sb04g029990
Functional annotation ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed
UniProt A0A194YRS0 , A0A194YRR9
Pfam PF00011 PF01388 PF01388
Panther DB PTHR15348 PTHR15348:SF4
NCBI CDD KOG2744; DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT2G17410 : ARID/BRIGHT DNA-binding domain-containing protein
RAP-DB (Rice) LOC_Os02g48370.1 : ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a032518 , Zm00025a021803
Brachypodium KQK01010
Barley HORVU6Hr1G070230.3 , HORVU6Hr1G070230.8 , HORVU6Hr1G070230.9 , HORVU6Hr1G070230.1 , HORVU6Hr1G070230.2 , HORVU6Hr1G070230.4 , HORVU6Hr1G070230.5 , HORVU6Hr1G070230.6 , HORVU6Hr1G070230.7
Wheat TraesCS2D02G245500 , TraesCS2D02G245500 , TraesCS2D02G245500 , TraesCS6B02G308000 , TraesCS6D02G259600 , TraesCS2A02G240000 , TraesCS2B02G260300 , TraesCS2B02G260300 , TraesCS6A02G279200
Populus PNT42338 , PNT42337


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G001100 ELMO/CED-12 family protein, putative, expressed -
2 Sobic.001G167600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
3 Sobic.010G024400 expressed protein -
4 Sobic.002G074800 - -
5 Sobic.004G064200 STE_PAK_Ste20_STLK.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
6 Sobic.008G136700 expressed protein -
7 Sobic.006G204400 maltose excess protein 1-like, chloroplast precursor, putative, expressed -
8 Sobic.006G027601 - -
9 Sobic.008G136601 - -
10 Sobic.006G097400 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
11 Sobic.005G048500 serine esterase family protein, putative, expressed -
12 Sobic.006G143900 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
13 Sobic.001G241401 - -
14 Sobic.007G176900 beta-galactosidase precursor, putative, expressed -
15 Sobic.005G135100 expressed protein -
16 Sobic.001G257800 myosin, putative, expressed K10357: myosin V
17 Sobic.003G024400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
18 Sobic.006G269101 - -
19 Sobic.001G286900 - -
20 Sobic.010G114200 katanin p60 ATPase-containing subunit, putative, expressed -


Gene co-expression network
sample Sobic004G261700 Sobic004G261700 Sobic006G001100 Sobic006G001100 Sobic004G261700--Sobic006G001100 Sobic001G167600 Sobic001G167600 Sobic004G261700--Sobic001G167600 Sobic010G024400 Sobic010G024400 Sobic004G261700--Sobic010G024400 Sobic002G074800 Sobic002G074800 Sobic004G261700--Sobic002G074800 Sobic004G064200 Sobic004G064200 Sobic004G261700--Sobic004G064200 Sobic008G136700 Sobic008G136700 Sobic004G261700--Sobic008G136700 Sobic006G204400 Sobic006G204400 Sobic004G261700--Sobic006G204400 Sobic006G027601 Sobic006G027601 Sobic004G261700--Sobic006G027601 Sobic008G136601 Sobic008G136601 Sobic004G261700--Sobic008G136601 Sobic006G001100--Sobic008G136601 Sobic007G176900 Sobic007G176900 Sobic006G001100--Sobic007G176900 Sobic006G001100--Sobic006G027601 Sobic003G333100 Sobic003G333100 Sobic006G001100--Sobic003G333100 Sobic009G061601 Sobic009G061601 Sobic006G001100--Sobic009G061601 Sobic006G205400 Sobic006G205400 Sobic006G001100--Sobic006G205400 Sobic002G295800 Sobic002G295800 Sobic006G001100--Sobic002G295800 Sobic003G175000 Sobic003G175000 Sobic006G001100--Sobic003G175000 Sobic002G254700 Sobic002G254700 Sobic006G001100--Sobic002G254700 Sobic010G124900 Sobic010G124900 Sobic001G167600--Sobic010G124900 Sobic001G167600--Sobic006G204400 Sobic001G106800 Sobic001G106800 Sobic001G167600--Sobic001G106800 Sobic002G111100 Sobic002G111100 Sobic001G167600--Sobic002G111100 Sobic006G097400 Sobic006G097400 Sobic001G167600--Sobic006G097400 Sobic001G156800 Sobic001G156800 Sobic001G167600--Sobic001G156800 Sobic006G095700 Sobic006G095700 Sobic001G167600--Sobic006G095700 Sobic008G103250 Sobic008G103250 Sobic001G167600--Sobic008G103250 Sobic002G030300 Sobic002G030300 Sobic001G167600--Sobic002G030300 Sobic010G202200 Sobic010G202200 Sobic010G024400--Sobic010G202200 Sobic009G230800 Sobic009G230800 Sobic010G024400--Sobic009G230800 Sobic003G236000 Sobic003G236000 Sobic010G024400--Sobic003G236000 Sobic010G024400--Sobic004G064200 Sobic001G519600 Sobic001G519600 Sobic010G024400--Sobic001G519600 Sobic006G269101 Sobic006G269101 Sobic010G024400--Sobic006G269101 Sobic008G148600 Sobic008G148600 Sobic010G024400--Sobic008G148600 Sobic005G225500 Sobic005G225500 Sobic010G024400--Sobic005G225500 Sobic001G024400 Sobic001G024400 Sobic010G024400--Sobic001G024400 Sobic002G074800--Sobic004G064200 Sobic002G074800--Sobic006G001100 Sobic002G074800--Sobic006G204400 Sobic002G074800--Sobic008G136601 Sobic010G114200 Sobic010G114200 Sobic002G074800--Sobic010G114200 Sobic006G143900 Sobic006G143900 Sobic002G074800--Sobic006G143900 Sobic004G228300 Sobic004G228300 Sobic002G074800--Sobic004G228300 Sobic005G048500 Sobic005G048500 Sobic002G074800--Sobic005G048500 Sobic002G074800--Sobic008G136700 Sobic004G064200--Sobic010G114200 Sobic003G014200 Sobic003G014200 Sobic004G064200--Sobic003G014200 Sobic004G064200--Sobic006G143900 Sobic010G179600 Sobic010G179600 Sobic004G064200--Sobic010G179600 Sobic009G068400 Sobic009G068400 Sobic004G064200--Sobic009G068400 Sobic001G117100 Sobic001G117100 Sobic004G064200--Sobic001G117100 Sobic001G225800 Sobic001G225800 Sobic004G064200--Sobic001G225800 Sobic009G152000 Sobic009G152000 Sobic004G064200--Sobic009G152000 Sobic008G036100 Sobic008G036100 Sobic004G064200--Sobic008G036100 Sobic008G136700--Sobic006G204400 Sobic006G028600 Sobic006G028600 Sobic008G136700--Sobic006G028600 Sobic004G002300 Sobic004G002300 Sobic008G136700--Sobic004G002300 Sobic008G136700--Sobic006G143900 Sobic008G136700--Sobic008G136601 Sobic008G136700--Sobic006G001100 Sobic009G229400 Sobic009G229400 Sobic008G136700--Sobic009G229400 Sobic001G315000 Sobic001G315000 Sobic008G136700--Sobic001G315000 Sobic008G136700--Sobic001G106800 Sobic006G204400--Sobic001G106800 Sobic006G204400--Sobic006G001100 Sobic006G204400--Sobic007G176900 Sobic006G204400--Sobic008G136601 Sobic006G204400--Sobic006G097400 Sobic006G204400--Sobic002G111100 Sobic001G163666 Sobic001G163666 Sobic006G204400--Sobic001G163666 Sobic006G204400--Sobic008G103250 Sobic001G241401 Sobic001G241401 Sobic006G204400--Sobic001G241401 Sobic006G027601--Sobic003G175000 Sobic006G027601--Sobic003G333100 Sobic006G027601--Sobic002G254700 Sobic005G003700 Sobic005G003700 Sobic006G027601--Sobic005G003700 Sobic003G420500 Sobic003G420500 Sobic006G027601--Sobic003G420500 Sobic010G276100 Sobic010G276100 Sobic006G027601--Sobic010G276100 Sobic009G175400 Sobic009G175400 Sobic006G027601--Sobic009G175400 Sobic002G126400 Sobic002G126400 Sobic006G027601--Sobic002G126400 Sobic010G040400 Sobic010G040400 Sobic006G027601--Sobic010G040400 Sobic008G136601--Sobic006G001100 Sobic008G136601--Sobic006G269101 Sobic008G136601--Sobic009G061601 Sobic001G212500 Sobic001G212500 Sobic008G136601--Sobic001G212500 Sobic005G043300 Sobic005G043300 Sobic008G136601--Sobic005G043300 Sobic001G165700 Sobic001G165700 Sobic008G136601--Sobic001G165700 Sobic008G136601--Sobic002G126400 Sobic007G131000 Sobic007G131000 Sobic008G136601--Sobic007G131000 Sobic003G445300 Sobic003G445300 Sobic008G136601--Sobic003G445300
Octagon: transcription factors


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