Gene annotation
Transcriptome id Sobic.009G176900.1
Synonym CHX15, Sb09g023730, ATCHX15
Functional annotation ATCHX, putative, expressed
UniProt C5YZV7
Pfam PF00999
Panther DB PTHR32468 PTHR32468:SF25
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015299solute:proton antiporter activity GO:0006812cation transport


Orthologs (automatic annotation)
TAIR AT2G13620 : cation/hydrogen exchanger 15
RAP-DB (Rice) LOC_Os05g40650.1 : ATCHX, putative, expressed
MaizeGDB (Corn) Zm00025a037802 , Zm00025a036954 , Zm00025a004711 , Zm00025a044040 , Zm00025a039786
Brachypodium KQK10316 , PNT73109 , KQK05704
Barley HORVU1Hr1G069170.2 , HORVU1Hr1G069170.3 , HORVU1Hr1G069170.1 , HORVU1Hr1G069170.6 , HORVU1Hr1G069170.7 , HORVU1Hr1G069170.4 , HORVU1Hr1G069170.5 , HORVU1Hr1G069170.8 , HORVU1Hr1G069170.9 , HORVU1Hr1G069170.10 , HORVU0Hr1G005680.2 , HORVU0Hr1G005680.1 , HORVU6Hr1G040290.1 , HORVU6Hr1G040290.3 , HORVU6Hr1G040290.2 , HORVU6Hr1G040290.4 , HORVU3Hr1G080390.5 , HORVU3Hr1G080390.4 , HORVU3Hr1G080390.1 , HORVU3Hr1G080390.3 , HORVU3Hr1G080390.2
Wheat TraesCS3D02G334000 , TraesCS1D02G303200 , TraesCS3A02G340500 , TraesCS2B02G551300 , TraesCS2D02G523600 , TraesCS2A02G521800 , TraesCS3B02G372100 , TraesCS1D02G303200 , TraesCS1A02G303800 , TraesCS1B02G314100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G106700 OsWAK75 - OsWAK receptor-like protein kinase, expressed -
2 Sobic.008G091785 - -
3 Sobic.007G007400 OsFBL38 - F-box domain and LRR containing protein, expressed -
4 Sobic.006G230000 - -
5 Sobic.008G164000 OsFBX358 - F-box domain containing protein, expressed -
6 Sobic.001G135650 - -
7 Sobic.009G253600 Rf1, mitochondrial precursor, putative, expressed -
8 Sobic.003G078000 - -
9 Sobic.010G138600 expressed protein -
10 Sobic.003G406060 - -
11 Sobic.005G191200 - K12858: DDX23, ATP-dependent RNA helicase DDX23/PRP28
12 Sobic.005G017400 ATCHX, putative, expressed -
13 Sobic.004G150901 - -
14 Sobic.009G030001 - -
15 Sobic.010G096500 expressed protein -
16 Sobic.003G394000 - -
17 Sobic.003G403000 "major aluminum tolerance, s a plasma membrane anion efflux transporter responsible for citrate release into the rhizosphere"(PubMedID : 17721535)@Aluminum tolerance(PubMedID : 17721535)@MATE efflux protein, putative, expressed -
18 Sobic.004G281500 fringe-related protein, putative, expressed -
19 Sobic.K028900 - -
20 Sobic.005G199800 expressed protein K04730: interleukin-1 receptor-associated kinase 1


Gene co-expression network
sample Sobic009G176900 Sobic009G176900 Sobic002G106700 Sobic002G106700 Sobic009G176900--Sobic002G106700 Sobic008G091785 Sobic008G091785 Sobic009G176900--Sobic008G091785 Sobic007G007400 Sobic007G007400 Sobic009G176900--Sobic007G007400 Sobic006G230000 Sobic006G230000 Sobic009G176900--Sobic006G230000 Sobic008G164000 Sobic008G164000 Sobic009G176900--Sobic008G164000 Sobic001G135650 Sobic001G135650 Sobic009G176900--Sobic001G135650 Sobic009G253600 Sobic009G253600 Sobic009G176900--Sobic009G253600 Sobic003G078000 Sobic003G078000 Sobic009G176900--Sobic003G078000 Sobic010G138600 Sobic010G138600 Sobic009G176900--Sobic010G138600 Sobic002G106700--Sobic008G091785 Sobic002G106700--Sobic007G007400 Sobic002G106700--Sobic001G135650 Sobic002G106700--Sobic006G230000 Sobic002G106700--Sobic008G164000 Sobic002G106700--Sobic003G078000 Sobic002G106700--Sobic009G253600 Sobic002G106700--Sobic010G138600 Sobic003G406060 Sobic003G406060 Sobic002G106700--Sobic003G406060 Sobic008G091785--Sobic007G007400 Sobic008G091785--Sobic002G106700 Sobic008G091785--Sobic001G135650 Sobic008G091785--Sobic009G253600 Sobic008G091785--Sobic010G138600 Sobic008G091785--Sobic003G078000 Sobic004G150901 Sobic004G150901 Sobic008G091785--Sobic004G150901 Sobic008G091785--Sobic006G230000 Sobic008G091785--Sobic008G164000 Sobic007G007400--Sobic008G091785 Sobic007G007400--Sobic002G106700 Sobic007G007400--Sobic001G135650 Sobic007G007400--Sobic009G253600 Sobic007G007400--Sobic010G138600 Sobic007G007400--Sobic003G078000 Sobic007G007400--Sobic004G150901 Sobic007G007400--Sobic006G230000 Sobic007G007400--Sobic008G164000 Sobic006G230000--Sobic002G106700 Sobic006G230000--Sobic008G091785 Sobic006G230000--Sobic007G007400 Sobic006G230000--Sobic008G164000 Sobic005G191200 Sobic005G191200 Sobic006G230000--Sobic005G191200 Sobic006G230000--Sobic003G406060 Sobic006G230000--Sobic001G135650 SobicK028900 SobicK028900 Sobic006G230000--SobicK028900 Sobic006G230000--Sobic003G078000 Sobic008G164000--Sobic005G191200 Sobic008G164000--Sobic002G106700 Sobic008G164000--Sobic003G406060 Sobic008G164000--Sobic008G091785 Sobic008G164000--Sobic006G230000 Sobic008G164000--Sobic007G007400 Sobic001G144150 Sobic001G144150 Sobic008G164000--Sobic001G144150 Sobic008G164000--Sobic001G135650 Sobic008G164000--SobicK028900 Sobic001G135650--Sobic008G091785 Sobic001G135650--Sobic002G106700 Sobic001G135650--Sobic007G007400 Sobic001G135650--Sobic009G253600 Sobic001G135650--Sobic010G138600 Sobic001G135650--Sobic004G150901 Sobic001G135650--Sobic003G078000 Sobic001G135650--Sobic008G164000 Sobic001G135650--Sobic006G230000 Sobic009G253600--Sobic010G138600 Sobic009G253600--Sobic004G150901 Sobic009G253600--Sobic008G091785 Sobic008G084000 Sobic008G084000 Sobic009G253600--Sobic008G084000 Sobic009G253600--Sobic007G007400 Sobic009G253600--Sobic002G106700 Sobic009G253600--Sobic001G135650 Sobic007G139850 Sobic007G139850 Sobic009G253600--Sobic007G139850 Sobic009G021050 Sobic009G021050 Sobic009G253600--Sobic009G021050 Sobic003G078000--Sobic002G106700 Sobic003G078000--Sobic007G007400 Sobic003G078000--Sobic008G091785 Sobic003G078000--Sobic003G406060 Sobic005G198600 Sobic005G198600 Sobic003G078000--Sobic005G198600 Sobic006G189600 Sobic006G189600 Sobic003G078000--Sobic006G189600 Sobic003G078000--Sobic009G253600 Sobic003G078000--Sobic001G135650 Sobic003G078000--Sobic010G138600 Sobic010G138600--Sobic009G253600 Sobic010G138600--Sobic004G150901 Sobic010G138600--Sobic008G091785 Sobic010G138600--Sobic008G084000 Sobic010G138600--Sobic007G007400 Sobic010G138600--Sobic002G106700 Sobic010G138600--Sobic001G135650 Sobic010G138600--Sobic007G139850 Sobic010G138600--Sobic009G021050
Octagon: transcription factors


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