Gene annotation
Transcriptome id Sobic.005G023100.1,Sobic.005G023100.3
Synonym
Functional annotation OsFBX369 - F-box domain containing protein, expressed
UniProt A0A1Z5RHG7 , A0A1Z5RGI4
Pfam PF12937 PF00646
Panther DB PTHR32133 PTHR32133:SF137
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G07610 : F-box family protein
RAP-DB (Rice) LOC_Os10g05240.1 : OsFBX369 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS6A02G058100 , TraesCS6B02G074400
Populus -


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cDNA sequences
Sobic.005G023100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G176900 proton pump interactor, putative, expressed -
2 Sobic.003G074300 expressed protein -
3 Sobic.001G057900 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
4 Sobic.001G156200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.004G093000 protein kinase domain containing protein, putative, expressed -
6 Sobic.004G234000 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
7 Sobic.010G039700 pollen-specific protein, putative, expressed -
8 Sobic.003G374400 chloride channel protein, putative, expressed K05016: chloride channel 7
9 Sobic.004G218800 expressed protein -
10 Sobic.010G266100 endoglucanase, putative, expressed -
11 Sobic.009G174800 thioredoxin, putative, expressed K03671: thioredoxin 1
12 Sobic.002G408400 beta-amylase, putative, expressed -
13 Sobic.004G200100 leucine-rich repeat family protein, putative, expressed -
14 Sobic.009G176900 ATCHX, putative, expressed -
15 Sobic.004G200600 - -
16 Sobic.008G057200 amino acid transporter, putative, expressed -
17 Sobic.002G049500 LTPL77 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
18 Sobic.003G384750 - -
19 Sobic.004G327900 expressed protein -
20 Sobic.005G067200 expressed protein -


Gene co-expression network
sample Sobic005G023100 Sobic005G023100 Sobic002G176900 Sobic002G176900 Sobic005G023100--Sobic002G176900 Sobic003G074300 Sobic003G074300 Sobic005G023100--Sobic003G074300 Sobic001G057900 Sobic001G057900 Sobic005G023100--Sobic001G057900 Sobic001G156200 Sobic001G156200 Sobic005G023100--Sobic001G156200 Sobic004G093000 Sobic004G093000 Sobic005G023100--Sobic004G093000 Sobic004G234000 Sobic004G234000 Sobic005G023100--Sobic004G234000 Sobic010G039700 Sobic010G039700 Sobic005G023100--Sobic010G039700 Sobic003G374400 Sobic003G374400 Sobic005G023100--Sobic003G374400 Sobic004G218800 Sobic004G218800 Sobic005G023100--Sobic004G218800 Sobic010G266100 Sobic010G266100 Sobic002G176900--Sobic010G266100 Sobic001G251500 Sobic001G251500 Sobic002G176900--Sobic001G251500 Sobic002G176900--Sobic005G023100 Sobic002G176900--Sobic003G374400 Sobic006G218100 Sobic006G218100 Sobic002G176900--Sobic006G218100 Sobic007G213200 Sobic007G213200 Sobic002G176900--Sobic007G213200 Sobic003G002900 Sobic003G002900 Sobic002G176900--Sobic003G002900 Sobic005G138900 Sobic005G138900 Sobic002G176900--Sobic005G138900 Sobic001G536200 Sobic001G536200 Sobic002G176900--Sobic001G536200 Sobic003G074300--Sobic001G057900 Sobic003G074300--Sobic004G234000 Sobic003G074300--Sobic001G156200 Sobic004G200100 Sobic004G200100 Sobic003G074300--Sobic004G200100 Sobic005G067200 Sobic005G067200 Sobic003G074300--Sobic005G067200 Sobic003G074300--Sobic010G039700 Sobic003G370800 Sobic003G370800 Sobic003G074300--Sobic003G370800 Sobic001G407300 Sobic001G407300 Sobic003G074300--Sobic001G407300 Sobic007G195900 Sobic007G195900 Sobic003G074300--Sobic007G195900 Sobic001G057900--Sobic003G074300 Sobic001G057900--Sobic001G156200 Sobic001G057900--Sobic005G067200 Sobic001G057900--Sobic004G200100 Sobic003G403000 Sobic003G403000 Sobic001G057900--Sobic003G403000 Sobic001G057900--Sobic004G234000 Sobic001G057900--Sobic001G407300 Sobic004G218200 Sobic004G218200 Sobic001G057900--Sobic004G218200 Sobic010G279600 Sobic010G279600 Sobic001G057900--Sobic010G279600 Sobic001G156200--Sobic004G234000 Sobic001G156200--Sobic001G057900 Sobic001G156200--Sobic003G074300 Sobic004G355900 Sobic004G355900 Sobic001G156200--Sobic004G355900 Sobic002G083100 Sobic002G083100 Sobic001G156200--Sobic002G083100 Sobic004G014900 Sobic004G014900 Sobic001G156200--Sobic004G014900 Sobic004G255100 Sobic004G255100 Sobic001G156200--Sobic004G255100 Sobic001G156200--Sobic004G200100 Sobic001G003400 Sobic001G003400 Sobic001G156200--Sobic001G003400 Sobic001G124900 Sobic001G124900 Sobic004G093000--Sobic001G124900 Sobic004G093000--Sobic004G234000 Sobic009G203500 Sobic009G203500 Sobic004G093000--Sobic009G203500 Sobic004G093000--Sobic003G074300 Sobic004G327900 Sobic004G327900 Sobic004G093000--Sobic004G327900 Sobic002G381800 Sobic002G381800 Sobic004G093000--Sobic002G381800 Sobic003G302600 Sobic003G302600 Sobic004G093000--Sobic003G302600 Sobic005G106700 Sobic005G106700 Sobic004G093000--Sobic005G106700 Sobic005G014500 Sobic005G014500 Sobic004G093000--Sobic005G014500 Sobic004G234000--Sobic004G200100 Sobic004G234000--Sobic003G074300 Sobic004G234000--Sobic004G327900 Sobic004G234000--Sobic001G156200 Sobic004G234000--Sobic002G381800 Sobic001G123400 Sobic001G123400 Sobic004G234000--Sobic001G123400 Sobic004G288000 Sobic004G288000 Sobic004G234000--Sobic004G288000 Sobic003G394000 Sobic003G394000 Sobic004G234000--Sobic003G394000 Sobic007G009900 Sobic007G009900 Sobic004G234000--Sobic007G009900 Sobic010G032200 Sobic010G032200 Sobic010G039700--Sobic010G032200 Sobic010G039700--Sobic005G067200 Sobic009G237900 Sobic009G237900 Sobic010G039700--Sobic009G237900 Sobic004G240250 Sobic004G240250 Sobic010G039700--Sobic004G240250 Sobic002G068701 Sobic002G068701 Sobic010G039700--Sobic002G068701 Sobic001G041300 Sobic001G041300 Sobic010G039700--Sobic001G041300 Sobic004G200600 Sobic004G200600 Sobic010G039700--Sobic004G200600 Sobic010G200600 Sobic010G200600 Sobic010G039700--Sobic010G200600 Sobic005G027250 Sobic005G027250 Sobic010G039700--Sobic005G027250 Sobic002G174100 Sobic002G174100 Sobic003G374400--Sobic002G174100 Sobic007G090439 Sobic007G090439 Sobic003G374400--Sobic007G090439 Sobic002G303900 Sobic002G303900 Sobic003G374400--Sobic002G303900 Sobic003G374400--Sobic002G176900 Sobic003G374400--Sobic001G536200 Sobic003G374400--Sobic006G218100 Sobic003G374400--Sobic001G003400 Sobic001G332400 Sobic001G332400 Sobic003G374400--Sobic001G332400 Sobic004G323500 Sobic004G323500 Sobic003G374400--Sobic004G323500 Sobic004G218800--Sobic002G174100 Sobic004G218800--Sobic001G057900 Sobic004G218800--Sobic003G074300 Sobic004G218800--Sobic004G218200 Sobic009G143600 Sobic009G143600 Sobic004G218800--Sobic009G143600 Sobic008G095766 Sobic008G095766 Sobic004G218800--Sobic008G095766 Sobic010G247900 Sobic010G247900 Sobic004G218800--Sobic010G247900 Sobic004G218800--Sobic003G370800 Sobic004G218800--Sobic005G023100
Octagon: transcription factors


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