Gene annotation
Transcriptome id Sobic.008G057200.1
Synonym Sb08g004810, ATAAP3, AAP3
Functional annotation amino acid transporter, putative, expressed
UniProt A0A1B6PBP3
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF290
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09220 : amino acid permease 2
RAP-DB (Rice) LOC_Os12g08130.1 : amino acid transporter, putative, expressed
MaizeGDB (Corn) Zm00025a025708 , Zm00025a030927 , Zm00025a054079 , Zm00025a034135 , Zm00025a026558 , Zm00025a040594 , Zm00025a054084 , Zm00025a025707 , Zm00025a054081 , Zm00025a054082 , Zm00025a051049 , Zm00025a012741 , Zm00025a037366
Brachypodium PNT76161 , PNT76162 , PNT69503 , KQJ85085 , KQJ89071 , KQJ91992 , KQJ91991 , KQK10901 , KQK01542 , KQK18868 , KQK18866 , KQK18867 , KQJ91917 , KQJ83307 , KQK10853 , KQK18009 , KQK10902
Barley HORVU5Hr1G037660.9 , HORVU5Hr1G037660.8 , HORVU5Hr1G037660.5 , HORVU5Hr1G037660.4 , HORVU5Hr1G037660.7 , HORVU5Hr1G037660.6 , HORVU5Hr1G037660.1 , HORVU5Hr1G037660.3 , HORVU5Hr1G037660.2 , HORVU7Hr1G088560.6 , HORVU7Hr1G088560.7 , HORVU7Hr1G088560.4 , HORVU7Hr1G088560.5 , HORVU7Hr1G088560.2 , HORVU7Hr1G088560.3 , HORVU7Hr1G088560.1 , HORVU7Hr1G038330.8 , HORVU7Hr1G038330.1 , HORVU7Hr1G038330.2 , HORVU7Hr1G038330.3 , HORVU7Hr1G038330.4 , HORVU7Hr1G038330.5 , HORVU7Hr1G038330.6 , HORVU7Hr1G038330.7 , HORVU1Hr1G064970.10 , HORVU1Hr1G064970.12 , HORVU2Hr1G084800.1 , HORVU2Hr1G084780.9 , HORVU2Hr1G084780.8 , HORVU2Hr1G084780.7 , HORVU2Hr1G084780.6 , HORVU2Hr1G084780.5 , HORVU2Hr1G084780.4 , HORVU2Hr1G084780.3 , HORVU2Hr1G084780.2 , HORVU2Hr1G084780.1 , HORVU4Hr1G043680.1 , HORVU4Hr1G043680.3 , HORVU4Hr1G043680.2 , HORVU4Hr1G043680.5 , HORVU4Hr1G043680.4 , HORVU5Hr1G037030.2 , HORVU1Hr1G064970.9 , HORVU1Hr1G064970.8 , HORVU1Hr1G064970.1 , HORVU1Hr1G064970.3 , HORVU1Hr1G064970.5 , HORVU1Hr1G064970.4 , HORVU1Hr1G064970.6 , HORVU2Hr1G061190.7 , HORVU2Hr1G061190.5 , HORVU2Hr1G061190.4 , HORVU2Hr1G061190.3 , HORVU2Hr1G061190.2 , HORVU2Hr1G061190.1
Wheat TraesCS4B02G100800 , TraesCS1A02G264500 , TraesCS4D02G097400 , TraesCS7A02G188200 , TraesCS2A02G499800 , TraesCS5B02G116100 , TraesCS7A02G356600 , TraesCS4A02G215300 , TraesCS2D02G256000 , TraesCS2A02G268200 , TraesCS1D02G264700 , TraesCS2B02G266600 , TraesCS7B02G271200 , TraesCS5A02G115100 , TraesCS5D02G125700 , TraesCS1B02G275200 , TraesCS2B02G367000 , TraesCS2D02G347000 , TraesCS2D02G346500 , TraesCS7D02G189000 , TraesCS7D02G366200 , TraesCS7B02G093200 , TraesCS2A02G348600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G103400 MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
2 Sobic.002G408400 beta-amylase, putative, expressed -
3 Sobic.008G104900 - -
4 Sobic.007G009900 - -
5 Sobic.003G384750 - -
6 Sobic.003G370800 aminotransferase, classes I and II, domain containing protein, expressed K15849: PAT, bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
7 Sobic.003G394000 - -
8 Sobic.009G212900 myosin head family protein, expressed K10357: myosin V
9 Sobic.001G123400 expressed protein -
10 Sobic.001G179500 OsFBX85 - F-box domain containing protein, expressed -
11 Sobic.005G077600 OsFBO22 - F-box and other domain containing protein, expressed -
12 Sobic.007G019700 ATCHX, putative, expressed -
13 Sobic.007G160050 - -
14 Sobic.003G232500 - -
15 Sobic.004G200100 leucine-rich repeat family protein, putative, expressed -
16 Sobic.001G520600 DNA topoisomerase 2, putative, expressed -
17 Sobic.006G244200 OsFBDUF42 - F-box and DUF domain containing protein, expressed -
18 Sobic.001G159500 tesmin/TSO1-like CXC domain containing protein, expressed -
19 Sobic.001G332933 - -
20 Sobic.007G070100 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma


Gene co-expression network
sample Sobic008G057200 Sobic008G057200 Sobic010G103400 Sobic010G103400 Sobic008G057200--Sobic010G103400 Sobic002G408400 Sobic002G408400 Sobic008G057200--Sobic002G408400 Sobic008G104900 Sobic008G104900 Sobic008G057200--Sobic008G104900 Sobic007G009900 Sobic007G009900 Sobic008G057200--Sobic007G009900 Sobic003G384750 Sobic003G384750 Sobic008G057200--Sobic003G384750 Sobic003G370800 Sobic003G370800 Sobic008G057200--Sobic003G370800 Sobic003G394000 Sobic003G394000 Sobic008G057200--Sobic003G394000 Sobic009G212900 Sobic009G212900 Sobic008G057200--Sobic009G212900 Sobic001G123400 Sobic001G123400 Sobic008G057200--Sobic001G123400 Sobic010G103400--Sobic007G009900 Sobic010G103400--Sobic008G104900 Sobic010G103400--Sobic008G057200 Sobic005G077600 Sobic005G077600 Sobic010G103400--Sobic005G077600 Sobic010G103400--Sobic002G408400 Sobic004G355900 Sobic004G355900 Sobic010G103400--Sobic004G355900 Sobic002G255800 Sobic002G255800 Sobic010G103400--Sobic002G255800 Sobic007G019700 Sobic007G019700 Sobic010G103400--Sobic007G019700 Sobic007G057201 Sobic007G057201 Sobic010G103400--Sobic007G057201 Sobic002G408400--Sobic008G104900 Sobic002G408400--Sobic003G370800 Sobic002G408400--Sobic008G057200 Sobic002G408400--Sobic007G009900 Sobic002G408400--Sobic010G103400 Sobic002G408400--Sobic003G384750 Sobic009G143600 Sobic009G143600 Sobic002G408400--Sobic009G143600 Sobic002G408400--Sobic009G212900 Sobic006G244200 Sobic006G244200 Sobic002G408400--Sobic006G244200 Sobic008G104900--Sobic002G408400 Sobic008G104900--Sobic010G103400 Sobic008G104900--Sobic003G370800 Sobic008G104900--Sobic007G009900 Sobic008G104900--Sobic008G057200 Sobic008G104900--Sobic005G077600 Sobic008G104900--Sobic007G019700 Sobic008G104900--Sobic003G394000 Sobic001G336450 Sobic001G336450 Sobic008G104900--Sobic001G336450 Sobic007G009900--Sobic010G103400 Sobic007G009900--Sobic008G104900 Sobic007G009900--Sobic001G123400 Sobic007G009900--Sobic002G408400 Sobic007G009900--Sobic003G370800 Sobic001G486800 Sobic001G486800 Sobic007G009900--Sobic001G486800 Sobic007G009900--Sobic009G212900 Sobic007G009900--Sobic008G057200 Sobic004G200100 Sobic004G200100 Sobic007G009900--Sobic004G200100 Sobic009G174800 Sobic009G174800 Sobic003G384750--Sobic009G174800 Sobic003G384750--Sobic002G408400 Sobic004G145550 Sobic004G145550 Sobic003G384750--Sobic004G145550 Sobic003G384750--Sobic006G244200 Sobic007G160050 Sobic007G160050 Sobic003G384750--Sobic007G160050 Sobic003G384750--Sobic008G057200 Sobic003G384750--Sobic003G370800 Sobic003G384750--Sobic009G143600 Sobic001G159500 Sobic001G159500 Sobic003G384750--Sobic001G159500 Sobic003G370800--Sobic002G408400 Sobic003G370800--Sobic008G104900 Sobic003G370800--Sobic009G212900 Sobic003G370800--Sobic009G143600 Sobic003G370800--Sobic007G009900 Sobic003G370800--Sobic004G200100 Sobic003G370800--Sobic003G394000 Sobic003G370800--Sobic003G384750 Sobic003G370800--Sobic001G486800 Sobic003G394000--Sobic004G200100 Sobic003G406060 Sobic003G406060 Sobic003G394000--Sobic003G406060 Sobic005G200100 Sobic005G200100 Sobic003G394000--Sobic005G200100 Sobic001G251000 Sobic001G251000 Sobic003G394000--Sobic001G251000 Sobic010G074000 Sobic010G074000 Sobic003G394000--Sobic010G074000 Sobic004G060400 Sobic004G060400 Sobic003G394000--Sobic004G060400 Sobic002G027901 Sobic002G027901 Sobic003G394000--Sobic002G027901 Sobic004G348000 Sobic004G348000 Sobic003G394000--Sobic004G348000 Sobic003G254200 Sobic003G254200 Sobic003G394000--Sobic003G254200 Sobic009G212900--Sobic003G370800 Sobic009G212900--Sobic007G009900 Sobic009G212900--Sobic009G143600 Sobic009G212900--Sobic001G123400 Sobic009G212900--Sobic004G200100 Sobic003G106800 Sobic003G106800 Sobic009G212900--Sobic003G106800 Sobic004G327900 Sobic004G327900 Sobic009G212900--Sobic004G327900 Sobic009G212900--Sobic002G408400 Sobic005G106700 Sobic005G106700 Sobic009G212900--Sobic005G106700 Sobic010G093200 Sobic010G093200 Sobic001G123400--Sobic010G093200 Sobic001G123400--Sobic007G009900 Sobic001G123400--Sobic004G327900 Sobic001G520600 Sobic001G520600 Sobic001G123400--Sobic001G520600 Sobic001G123400--Sobic009G212900 Sobic001G123400--Sobic005G106700 Sobic004G234000 Sobic004G234000 Sobic001G123400--Sobic004G234000 Sobic001G123400--Sobic004G145550 Sobic001G123400--Sobic004G200100
Octagon: transcription factors


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