Gene annotation
Transcriptome id Sobic.007G070100.2,Sobic.007G070100.1
Synonym ATHAP5B, HAP5B, SbNF-YC11, Sb07g005540, Nuclear Factor Y, NF-YC2
Functional annotation tentative name (PubMedID : 31536532)
core histone H2A/H2B/H3/H4, putative, expressed
UniProt C5YID9
Pfam PF00808
Panther DB PTHR10252 PTHR10252:SF37
NCBI CDD -
KEGG Orthology K08066; NFYC, nuclear transcription factor Y, gamma
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G56170 : nuclear factor Y, subunit C2
RAP-DB (Rice) LOC_Os02g07450.1,LOC_Os02g07450.2 : core histone H2A/H2B/H3/H4, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus PNT06336


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G095100 response regulator receiver domain containing protein, expressed -
2 Sobic.001G332933 - -
3 Sobic.002G408400 beta-amylase, putative, expressed -
4 Sobic.003G224900 - -
5 Sobic.008G057200 amino acid transporter, putative, expressed -
6 Sobic.003G384750 - -
7 Sobic.008G104900 - -
8 Sobic.010G103400 MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
9 Sobic.007G107800 expressed protein -
10 Sobic.005G156450 - -
11 Sobic.006G231900 SPRY-domain containing protein, putative, expressed K15047: HNRNPUL1, heterogeneous nuclear ribonucleoprotein U-like protein 1
12 Sobic.K031500 ATP binding protein, putative, expressed K17592: sacsin
13 Sobic.006G244200 OsFBDUF42 - F-box and DUF domain containing protein, expressed -
14 Sobic.001G488300 - -
15 Sobic.003G370800 aminotransferase, classes I and II, domain containing protein, expressed K15849: PAT, bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
16 Sobic.002G276500 HVA22, putative, expressed K17338: receptor expression-enhancing protein 1/2/3/4
17 Sobic.004G054600 porphobilinogen deaminase, chloroplast precursor, putative, expressed -
18 Sobic.006G183500 methyltransferase, putative, expressed -
19 Sobic.007G009900 - -
20 Sobic.004G145550 - -


Gene co-expression network
sample Sobic007G070100 Sobic007G070100 Sobic001G095100 Sobic001G095100 Sobic007G070100--Sobic001G095100 Sobic001G332933 Sobic001G332933 Sobic007G070100--Sobic001G332933 Sobic002G408400 Sobic002G408400 Sobic007G070100--Sobic002G408400 Sobic003G224900 Sobic003G224900 Sobic007G070100--Sobic003G224900 Sobic008G057200 Sobic008G057200 Sobic007G070100--Sobic008G057200 Sobic003G384750 Sobic003G384750 Sobic007G070100--Sobic003G384750 Sobic008G104900 Sobic008G104900 Sobic007G070100--Sobic008G104900 Sobic010G103400 Sobic010G103400 Sobic007G070100--Sobic010G103400 Sobic007G107800 Sobic007G107800 Sobic007G070100--Sobic007G107800 Sobic001G095100--Sobic007G070100 Sobic004G054600 Sobic004G054600 Sobic001G095100--Sobic004G054600 Sobic004G024500 Sobic004G024500 Sobic001G095100--Sobic004G024500 Sobic001G454700 Sobic001G454700 Sobic001G095100--Sobic001G454700 Sobic009G128400 Sobic009G128400 Sobic001G095100--Sobic009G128400 Sobic001G095100--Sobic007G107800 Sobic006G244200 Sobic006G244200 Sobic001G095100--Sobic006G244200 Sobic001G095100--Sobic001G332933 Sobic001G095100--Sobic003G224900 Sobic005G156450 Sobic005G156450 Sobic001G332933--Sobic005G156450 Sobic001G332933--Sobic007G107800 Sobic003G047400 Sobic003G047400 Sobic001G332933--Sobic003G047400 Sobic002G276500 Sobic002G276500 Sobic001G332933--Sobic002G276500 Sobic003G204750 Sobic003G204750 Sobic001G332933--Sobic003G204750 Sobic009G087480 Sobic009G087480 Sobic001G332933--Sobic009G087480 Sobic003G290200 Sobic003G290200 Sobic001G332933--Sobic003G290200 Sobic001G332933--Sobic007G070100 Sobic006G183500 Sobic006G183500 Sobic001G332933--Sobic006G183500 Sobic002G408400--Sobic008G104900 Sobic003G370800 Sobic003G370800 Sobic002G408400--Sobic003G370800 Sobic002G408400--Sobic008G057200 Sobic007G009900 Sobic007G009900 Sobic002G408400--Sobic007G009900 Sobic002G408400--Sobic010G103400 Sobic002G408400--Sobic003G384750 Sobic009G143600 Sobic009G143600 Sobic002G408400--Sobic009G143600 Sobic009G212900 Sobic009G212900 Sobic002G408400--Sobic009G212900 Sobic002G408400--Sobic006G244200 Sobic003G224900--Sobic007G070100 Sobic001G488300 Sobic001G488300 Sobic003G224900--Sobic001G488300 Sobic003G224900--Sobic005G156450 Sobic003G224900--Sobic007G107800 Sobic003G224900--Sobic001G332933 Sobic003G224900--Sobic008G057200 Sobic003G224900--Sobic002G408400 SobicK031500 SobicK031500 Sobic003G224900--SobicK031500 Sobic007G010100 Sobic007G010100 Sobic003G224900--Sobic007G010100 Sobic008G057200--Sobic010G103400 Sobic008G057200--Sobic002G408400 Sobic008G057200--Sobic008G104900 Sobic008G057200--Sobic007G009900 Sobic008G057200--Sobic003G384750 Sobic008G057200--Sobic003G370800 Sobic003G394000 Sobic003G394000 Sobic008G057200--Sobic003G394000 Sobic008G057200--Sobic009G212900 Sobic001G123400 Sobic001G123400 Sobic008G057200--Sobic001G123400 Sobic009G174800 Sobic009G174800 Sobic003G384750--Sobic009G174800 Sobic003G384750--Sobic002G408400 Sobic004G145550 Sobic004G145550 Sobic003G384750--Sobic004G145550 Sobic003G384750--Sobic006G244200 Sobic007G160050 Sobic007G160050 Sobic003G384750--Sobic007G160050 Sobic003G384750--Sobic008G057200 Sobic003G384750--Sobic003G370800 Sobic003G384750--Sobic009G143600 Sobic001G159500 Sobic001G159500 Sobic003G384750--Sobic001G159500 Sobic008G104900--Sobic002G408400 Sobic008G104900--Sobic010G103400 Sobic008G104900--Sobic003G370800 Sobic008G104900--Sobic007G009900 Sobic008G104900--Sobic008G057200 Sobic005G077600 Sobic005G077600 Sobic008G104900--Sobic005G077600 Sobic007G019700 Sobic007G019700 Sobic008G104900--Sobic007G019700 Sobic008G104900--Sobic003G394000 Sobic001G336450 Sobic001G336450 Sobic008G104900--Sobic001G336450 Sobic010G103400--Sobic007G009900 Sobic010G103400--Sobic008G104900 Sobic010G103400--Sobic008G057200 Sobic010G103400--Sobic005G077600 Sobic010G103400--Sobic002G408400 Sobic004G355900 Sobic004G355900 Sobic010G103400--Sobic004G355900 Sobic002G255800 Sobic002G255800 Sobic010G103400--Sobic002G255800 Sobic010G103400--Sobic007G019700 Sobic007G057201 Sobic007G057201 Sobic010G103400--Sobic007G057201 Sobic004G157050 Sobic004G157050 Sobic007G107800--Sobic004G157050 Sobic004G207800 Sobic004G207800 Sobic007G107800--Sobic004G207800 Sobic009G192200 Sobic009G192200 Sobic007G107800--Sobic009G192200 Sobic007G113566 Sobic007G113566 Sobic007G107800--Sobic007G113566 Sobic007G107800--Sobic003G290200 Sobic010G002301 Sobic010G002301 Sobic007G107800--Sobic010G002301 Sobic007G107800--Sobic001G332933 Sobic008G171200 Sobic008G171200 Sobic007G107800--Sobic008G171200 Sobic007G085900 Sobic007G085900 Sobic007G107800--Sobic007G085900
Octagon: transcription factors


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