Gene annotation
Transcriptome id Sobic.004G218800.1
Synonym Sb04g026380
Functional annotation expressed protein
UniProt C5XXS3
Pfam -
Panther DB PTHR34480 PTHR34480:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g73670.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G174100 - -
2 Sobic.001G057900 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
3 Sobic.003G074300 expressed protein -
4 Sobic.004G218200 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CPuORF40 - conserved peptide uORF-containing transcript, expressed -
5 Sobic.009G143600 clathrin assembly protein, putative, expressed -
6 Sobic.008G095766 - -
7 Sobic.010G247900 plant-specific domain TIGR01568 family protein, expressed -
8 Sobic.003G370800 aminotransferase, classes I and II, domain containing protein, expressed K15849: PAT, bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
9 Sobic.005G023100 OsFBX369 - F-box domain containing protein, expressed -
10 Sobic.004G200600 - -
11 Sobic.004G200100 leucine-rich repeat family protein, putative, expressed -
12 Sobic.002G408400 beta-amylase, putative, expressed -
13 Sobic.009G037700 signal recognition particle receptor, putative, expressed K13431: signal recognition particle receptor subunit alpha
14 Sobic.004G234000 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
15 Sobic.004G327900 expressed protein -
16 Sobic.001G072400 - -
17 Sobic.001G311400 - -
18 Sobic.009G212900 myosin head family protein, expressed K10357: myosin V
19 Sobic.007G009900 - -
20 Sobic.002G136200 beta-amylase, putative, expressed K01177: beta-amylase


Gene co-expression network
sample Sobic004G218800 Sobic004G218800 Sobic002G174100 Sobic002G174100 Sobic004G218800--Sobic002G174100 Sobic001G057900 Sobic001G057900 Sobic004G218800--Sobic001G057900 Sobic003G074300 Sobic003G074300 Sobic004G218800--Sobic003G074300 Sobic004G218200 Sobic004G218200 Sobic004G218800--Sobic004G218200 Sobic009G143600 Sobic009G143600 Sobic004G218800--Sobic009G143600 Sobic008G095766 Sobic008G095766 Sobic004G218800--Sobic008G095766 Sobic010G247900 Sobic010G247900 Sobic004G218800--Sobic010G247900 Sobic003G370800 Sobic003G370800 Sobic004G218800--Sobic003G370800 Sobic005G023100 Sobic005G023100 Sobic004G218800--Sobic005G023100 Sobic002G174100--Sobic008G095766 Sobic007G090439 Sobic007G090439 Sobic002G174100--Sobic007G090439 Sobic003G374400 Sobic003G374400 Sobic002G174100--Sobic003G374400 Sobic003G079532 Sobic003G079532 Sobic002G174100--Sobic003G079532 Sobic001G003400 Sobic001G003400 Sobic002G174100--Sobic001G003400 Sobic002G193200 Sobic002G193200 Sobic002G174100--Sobic002G193200 Sobic010G027400 Sobic010G027400 Sobic002G174100--Sobic010G027400 Sobic008G191900 Sobic008G191900 Sobic002G174100--Sobic008G191900 Sobic001G332400 Sobic001G332400 Sobic002G174100--Sobic001G332400 Sobic001G057900--Sobic003G074300 Sobic001G156200 Sobic001G156200 Sobic001G057900--Sobic001G156200 Sobic005G067200 Sobic005G067200 Sobic001G057900--Sobic005G067200 Sobic004G200100 Sobic004G200100 Sobic001G057900--Sobic004G200100 Sobic003G403000 Sobic003G403000 Sobic001G057900--Sobic003G403000 Sobic004G234000 Sobic004G234000 Sobic001G057900--Sobic004G234000 Sobic001G407300 Sobic001G407300 Sobic001G057900--Sobic001G407300 Sobic001G057900--Sobic004G218200 Sobic010G279600 Sobic010G279600 Sobic001G057900--Sobic010G279600 Sobic003G074300--Sobic001G057900 Sobic003G074300--Sobic004G234000 Sobic003G074300--Sobic001G156200 Sobic003G074300--Sobic004G200100 Sobic003G074300--Sobic005G067200 Sobic010G039700 Sobic010G039700 Sobic003G074300--Sobic010G039700 Sobic003G074300--Sobic003G370800 Sobic003G074300--Sobic001G407300 Sobic007G195900 Sobic007G195900 Sobic003G074300--Sobic007G195900 Sobic010G200600 Sobic010G200600 Sobic004G218200--Sobic010G200600 Sobic004G218200--Sobic005G067200 Sobic004G218200--Sobic003G403000 Sobic004G218200--Sobic007G195900 Sobic005G152550 Sobic005G152550 Sobic004G218200--Sobic005G152550 Sobic010G037701 Sobic010G037701 Sobic004G218200--Sobic010G037701 Sobic003G154900 Sobic003G154900 Sobic004G218200--Sobic003G154900 Sobic007G136000 Sobic007G136000 Sobic004G218200--Sobic007G136000 Sobic002G084200 Sobic002G084200 Sobic004G218200--Sobic002G084200 Sobic006G244200 Sobic006G244200 Sobic009G143600--Sobic006G244200 Sobic009G143600--Sobic003G370800 Sobic009G212900 Sobic009G212900 Sobic009G143600--Sobic009G212900 Sobic002G408400 Sobic002G408400 Sobic009G143600--Sobic002G408400 Sobic004G145550 Sobic004G145550 Sobic009G143600--Sobic004G145550 Sobic003G384750 Sobic003G384750 Sobic009G143600--Sobic003G384750 Sobic007G009900 Sobic007G009900 Sobic009G143600--Sobic007G009900 Sobic003G106800 Sobic003G106800 Sobic009G143600--Sobic003G106800 Sobic001G123400 Sobic001G123400 Sobic009G143600--Sobic001G123400 Sobic008G095766--Sobic002G193200 Sobic004G186400 Sobic004G186400 Sobic008G095766--Sobic004G186400 Sobic008G095766--Sobic003G079532 Sobic008G095766--Sobic008G191900 Sobic002G359100 Sobic002G359100 Sobic008G095766--Sobic002G359100 Sobic003G211233 Sobic003G211233 Sobic008G095766--Sobic003G211233 Sobic004G031900 Sobic004G031900 Sobic008G095766--Sobic004G031900 Sobic004G345001 Sobic004G345001 Sobic008G095766--Sobic004G345001 Sobic004G288000 Sobic004G288000 Sobic008G095766--Sobic004G288000 Sobic004G312900 Sobic004G312900 Sobic010G247900--Sobic004G312900 Sobic004G200600 Sobic004G200600 Sobic010G247900--Sobic004G200600 Sobic003G035200 Sobic003G035200 Sobic010G247900--Sobic003G035200 Sobic009G240300 Sobic009G240300 Sobic010G247900--Sobic009G240300 Sobic006G172400 Sobic006G172400 Sobic010G247900--Sobic006G172400 Sobic002G349800 Sobic002G349800 Sobic010G247900--Sobic002G349800 Sobic007G139800 Sobic007G139800 Sobic010G247900--Sobic007G139800 Sobic001G336900 Sobic001G336900 Sobic010G247900--Sobic001G336900 Sobic010G247900--Sobic002G174100 Sobic003G370800--Sobic002G408400 Sobic008G104900 Sobic008G104900 Sobic003G370800--Sobic008G104900 Sobic003G370800--Sobic009G212900 Sobic003G370800--Sobic009G143600 Sobic003G370800--Sobic007G009900 Sobic003G370800--Sobic004G200100 Sobic003G394000 Sobic003G394000 Sobic003G370800--Sobic003G394000 Sobic003G370800--Sobic003G384750 Sobic001G486800 Sobic001G486800 Sobic003G370800--Sobic001G486800 Sobic002G176900 Sobic002G176900 Sobic005G023100--Sobic002G176900 Sobic005G023100--Sobic003G074300 Sobic005G023100--Sobic001G057900 Sobic005G023100--Sobic001G156200 Sobic004G093000 Sobic004G093000 Sobic005G023100--Sobic004G093000 Sobic005G023100--Sobic004G234000 Sobic005G023100--Sobic010G039700 Sobic005G023100--Sobic003G374400 Sobic005G023100--Sobic004G218800
Octagon: transcription factors


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