Gene annotation
Transcriptome id Sobic.009G037700.1
Synonym Sb09g003220
Functional annotation signal recognition particle receptor, putative, expressed
UniProt C5YZN3
Pfam PF01656 PF02881 PF04086
Panther DB PTHR11564 PTHR11564:SF16
NCBI CDD -
KEGG Orthology K13431; signal recognition particle receptor subunit alpha
Gene Ontology GO:0006614; SRP-dependent cotranslational protein targeting to membrane GO:0005525GTP binding GO:0006886intracellular protein transport GO:0005785signal recognition particle receptor complex GO:0005047signal recognition particle binding GO:0003924GTPase activity


Orthologs (automatic annotation)
TAIR AT4G30600 : signal recognition particle receptor alpha subunit family protein
RAP-DB (Rice) LOC_Os08g37444.3 : signal recognition particle receptor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK24115 , KQJ94447
Barley -
Wheat TraesCS5A02G534900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G218200 expressed protein -
2 Sobic.009G138401 - -
3 Sobic.003G066300 expressed protein -
4 Sobic.004G288000 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.001G332400 DUF1336 domain containing protein, expressed -
6 Sobic.008G095766 - -
7 Sobic.001G003400 heavy-metal-associated domain-containing protein, putative, expressed -
8 Sobic.004G031900 phosphatidylinositol transfer, putative, expressed -
9 Sobic.002G193200 - -
10 Sobic.004G255100 nitrate-induced NOI protein, putative, expressed -
11 Sobic.004G348000 white-brown complex homolog protein, putative, expressed -
12 Sobic.010G082300 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
13 Sobic.007G209900 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
14 Sobic.004G048900 myosin heavy chain, putative, expressed -
15 Sobic.004G060400 ANTH/ENTH domain containing protein, putative, expressed -
16 Sobic.002G136200 beta-amylase, putative, expressed K01177: beta-amylase
17 Sobic.002G174100 - -
18 Sobic.003G064100 expressed protein -
19 Sobic.005G052400 - -
20 Sobic.002G359100 expressed protein -


Gene co-expression network
sample Sobic009G037700 Sobic009G037700 Sobic006G218200 Sobic006G218200 Sobic009G037700--Sobic006G218200 Sobic009G138401 Sobic009G138401 Sobic009G037700--Sobic009G138401 Sobic003G066300 Sobic003G066300 Sobic009G037700--Sobic003G066300 Sobic004G288000 Sobic004G288000 Sobic009G037700--Sobic004G288000 Sobic001G332400 Sobic001G332400 Sobic009G037700--Sobic001G332400 Sobic008G095766 Sobic008G095766 Sobic009G037700--Sobic008G095766 Sobic001G003400 Sobic001G003400 Sobic009G037700--Sobic001G003400 Sobic004G031900 Sobic004G031900 Sobic009G037700--Sobic004G031900 Sobic002G193200 Sobic002G193200 Sobic009G037700--Sobic002G193200 Sobic006G218200--Sobic009G037700 Sobic008G188800 Sobic008G188800 Sobic006G218200--Sobic008G188800 Sobic008G070600 Sobic008G070600 Sobic006G218200--Sobic008G070600 Sobic001G457500 Sobic001G457500 Sobic006G218200--Sobic001G457500 Sobic006G219801 Sobic006G219801 Sobic006G218200--Sobic006G219801 Sobic007G144100 Sobic007G144100 Sobic006G218200--Sobic007G144100 Sobic010G058300 Sobic010G058300 Sobic006G218200--Sobic010G058300 Sobic009G047066 Sobic009G047066 Sobic006G218200--Sobic009G047066 Sobic003G072700 Sobic003G072700 Sobic006G218200--Sobic003G072700 Sobic001G210600 Sobic001G210600 Sobic009G138401--Sobic001G210600 Sobic008G002201 Sobic008G002201 Sobic009G138401--Sobic008G002201 Sobic003G356800 Sobic003G356800 Sobic009G138401--Sobic003G356800 Sobic009G138401--Sobic001G457500 Sobic010G064200 Sobic010G064200 Sobic009G138401--Sobic010G064200 Sobic010G263700 Sobic010G263700 Sobic009G138401--Sobic010G263700 Sobic003G183100 Sobic003G183100 Sobic009G138401--Sobic003G183100 Sobic007G209900 Sobic007G209900 Sobic009G138401--Sobic007G209900 Sobic009G246600 Sobic009G246600 Sobic009G138401--Sobic009G246600 Sobic003G064100 Sobic003G064100 Sobic003G066300--Sobic003G064100 Sobic003G066300--Sobic007G209900 Sobic001G435300 Sobic001G435300 Sobic003G066300--Sobic001G435300 Sobic003G208900 Sobic003G208900 Sobic003G066300--Sobic003G208900 Sobic007G112832 Sobic007G112832 Sobic003G066300--Sobic007G112832 Sobic004G042800 Sobic004G042800 Sobic003G066300--Sobic004G042800 Sobic009G249400 Sobic009G249400 Sobic003G066300--Sobic009G249400 Sobic003G066300--Sobic004G031900 Sobic001G196400 Sobic001G196400 Sobic003G066300--Sobic001G196400 Sobic004G288000--Sobic004G031900 Sobic004G060400 Sobic004G060400 Sobic004G288000--Sobic004G060400 Sobic004G288000--Sobic009G249400 Sobic010G187800 Sobic010G187800 Sobic004G288000--Sobic010G187800 Sobic008G191900 Sobic008G191900 Sobic004G288000--Sobic008G191900 Sobic002G359100 Sobic002G359100 Sobic004G288000--Sobic002G359100 Sobic009G176200 Sobic009G176200 Sobic004G288000--Sobic009G176200 Sobic004G288000--Sobic003G066300 Sobic010G074000 Sobic010G074000 Sobic004G288000--Sobic010G074000 Sobic001G332400--Sobic008G191900 Sobic001G332400--Sobic004G031900 Sobic006G115800 Sobic006G115800 Sobic001G332400--Sobic006G115800 Sobic001G332400--Sobic002G359100 Sobic001G332400--Sobic009G176200 Sobic001G332400--Sobic010G187800 Sobic002G405300 Sobic002G405300 Sobic001G332400--Sobic002G405300 Sobic003G061600 Sobic003G061600 Sobic001G332400--Sobic003G061600 Sobic001G332400--Sobic009G249400 Sobic008G095766--Sobic002G193200 Sobic004G186400 Sobic004G186400 Sobic008G095766--Sobic004G186400 Sobic003G079532 Sobic003G079532 Sobic008G095766--Sobic003G079532 Sobic008G095766--Sobic008G191900 Sobic008G095766--Sobic002G359100 Sobic003G211233 Sobic003G211233 Sobic008G095766--Sobic003G211233 Sobic008G095766--Sobic004G031900 Sobic004G345001 Sobic004G345001 Sobic008G095766--Sobic004G345001 Sobic008G095766--Sobic004G288000 Sobic004G255100 Sobic004G255100 Sobic001G003400--Sobic004G255100 Sobic004G014900 Sobic004G014900 Sobic001G003400--Sobic004G014900 Sobic010G261900 Sobic010G261900 Sobic001G003400--Sobic010G261900 Sobic004G334900 Sobic004G334900 Sobic001G003400--Sobic004G334900 Sobic004G123100 Sobic004G123100 Sobic001G003400--Sobic004G123100 Sobic010G063700 Sobic010G063700 Sobic001G003400--Sobic010G063700 Sobic001G513400 Sobic001G513400 Sobic001G003400--Sobic001G513400 Sobic001G003400--Sobic004G031900 Sobic001G003400--Sobic010G187800 Sobic004G031900--Sobic009G176200 Sobic004G031900--Sobic009G249400 Sobic004G031900--Sobic010G187800 Sobic004G031900--Sobic008G191900 Sobic004G031900--Sobic002G359100 Sobic001G380000 Sobic001G380000 Sobic004G031900--Sobic001G380000 Sobic004G031900--Sobic003G208900 Sobic005G039000 Sobic005G039000 Sobic004G031900--Sobic005G039000 Sobic004G031900--Sobic010G074000 Sobic002G193200--Sobic003G211233 Sobic002G193200--Sobic003G064100 Sobic008G008000 Sobic008G008000 Sobic002G193200--Sobic008G008000 Sobic002G193200--Sobic003G066300 Sobic002G193200--Sobic003G079532 Sobic002G193200--Sobic008G095766 Sobic002G193200--Sobic002G359100 Sobic008G019200 Sobic008G019200 Sobic002G193200--Sobic008G019200 Sobic005G198800 Sobic005G198800 Sobic002G193200--Sobic005G198800
Octagon: transcription factors


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