Gene annotation
Transcriptome id Sobic.002G223000.1
Synonym Sb02g026380
Functional annotation emp24/gp25L/p24 family protein, putative, expressed
UniProt C5X285
Pfam PF01105
Panther DB PTHR22811 PTHR22811:SF73
NCBI CDD KOG1691; emp24/gp25L/p24 family of membrane trafficking proteins
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0006810transport


Orthologs (automatic annotation)
TAIR AT1G09580 : emp24/gp25L/p24 family/GOLD family protein
RAP-DB (Rice) LOC_Os09g27980.1 : emp24/gp25L/p24 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a014036
Brachypodium KQJ90492
Barley HORVU5Hr1G067730.2 , HORVU5Hr1G067730.1
Wheat TraesCS5D02G242600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G080000 OsSPL15 - SBP-box gene family member, expressed -
2 Sobic.004G327200 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -
3 Sobic.002G287600 expressed protein -
4 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
5 Sobic.009G181900 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
6 Sobic.009G175800 B3 DNA binding domain containing protein, expressed -
7 Sobic.003G262500 OsPOP3 - Putative Prolyl Oligopeptidase homologue, expressed -
8 Sobic.005G025400 CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
9 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
10 Sobic.006G134300 - -
11 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
12 Sobic.008G104400 ZOS12-05 - C2H2 zinc finger protein, expressed K09506: DnaJ homolog subfamily A member 5
13 Sobic.003G139100 - -
14 Sobic.001G213300 cytochrome P450, putative, expressed K15402: fatty acid omega-hydroxylase
15 Sobic.003G253700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
16 Sobic.009G112500 lipase, putative, expressed -
17 Sobic.001G494400 DUF593 domain containing protein, expressed -
18 Sobic.001G410300 - -
19 Sobic.001G096200 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
20 Sobic.002G085600 - -


Gene co-expression network
sample Sobic002G223000 Sobic002G223000 Sobic009G080000 Sobic009G080000 Sobic002G223000--Sobic009G080000 Sobic004G327200 Sobic004G327200 Sobic002G223000--Sobic004G327200 Sobic002G287600 Sobic002G287600 Sobic002G223000--Sobic002G287600 Sobic006G249600 Sobic006G249600 Sobic002G223000--Sobic006G249600 Sobic009G181900 Sobic009G181900 Sobic002G223000--Sobic009G181900 Sobic009G175800 Sobic009G175800 Sobic002G223000--Sobic009G175800 Sobic003G262500 Sobic003G262500 Sobic002G223000--Sobic003G262500 Sobic005G025400 Sobic005G025400 Sobic002G223000--Sobic005G025400 Sobic002G398600 Sobic002G398600 Sobic002G223000--Sobic002G398600 Sobic009G080000--Sobic004G327200 Sobic003G253700 Sobic003G253700 Sobic009G080000--Sobic003G253700 Sobic009G080000--Sobic006G249600 Sobic003G155000 Sobic003G155000 Sobic009G080000--Sobic003G155000 Sobic002G187900 Sobic002G187900 Sobic009G080000--Sobic002G187900 Sobic008G142200 Sobic008G142200 Sobic009G080000--Sobic008G142200 Sobic003G262600 Sobic003G262600 Sobic009G080000--Sobic003G262600 Sobic006G134300 Sobic006G134300 Sobic009G080000--Sobic006G134300 Sobic003G263900 Sobic003G263900 Sobic009G080000--Sobic003G263900 Sobic004G327200--Sobic009G080000 Sobic004G327200--Sobic003G253700 Sobic004G327200--Sobic006G249600 Sobic004G327200--Sobic003G155000 Sobic002G209450 Sobic002G209450 Sobic004G327200--Sobic002G209450 Sobic009G223900 Sobic009G223900 Sobic004G327200--Sobic009G223900 Sobic002G413800 Sobic002G413800 Sobic004G327200--Sobic002G413800 Sobic004G327200--Sobic002G398600 Sobic009G112500 Sobic009G112500 Sobic004G327200--Sobic009G112500 Sobic008G072800 Sobic008G072800 Sobic002G287600--Sobic008G072800 Sobic004G342200 Sobic004G342200 Sobic002G287600--Sobic004G342200 Sobic002G287600--Sobic009G175800 Sobic008G190600 Sobic008G190600 Sobic002G287600--Sobic008G190600 Sobic001G191500 Sobic001G191500 Sobic002G287600--Sobic001G191500 Sobic008G083100 Sobic008G083100 Sobic002G287600--Sobic008G083100 Sobic002G287600--Sobic008G142200 Sobic002G287600--Sobic002G209450 Sobic002G413700 Sobic002G413700 Sobic002G287600--Sobic002G413700 Sobic001G212900 Sobic001G212900 Sobic006G249600--Sobic001G212900 Sobic006G249600--Sobic002G398600 Sobic006G249600--Sobic002G187900 Sobic006G249600--Sobic003G253700 Sobic006G249600--Sobic003G155000 Sobic006G249600--Sobic003G263900 Sobic001G109400 Sobic001G109400 Sobic006G249600--Sobic001G109400 Sobic004G173200 Sobic004G173200 Sobic006G249600--Sobic004G173200 Sobic006G157450 Sobic006G157450 Sobic006G249600--Sobic006G157450 Sobic002G399000 Sobic002G399000 Sobic009G181900--Sobic002G399000 Sobic007G114650 Sobic007G114650 Sobic009G181900--Sobic007G114650 Sobic009G181900--Sobic009G112500 Sobic003G440500 Sobic003G440500 Sobic009G181900--Sobic003G440500 Sobic009G181900--Sobic003G262500 Sobic009G181900--Sobic005G025400 Sobic001G410300 Sobic001G410300 Sobic009G181900--Sobic001G410300 Sobic010G278400 Sobic010G278400 Sobic009G181900--Sobic010G278400 Sobic001G350300 Sobic001G350300 Sobic009G181900--Sobic001G350300 Sobic009G230600 Sobic009G230600 Sobic009G175800--Sobic009G230600 Sobic004G242800 Sobic004G242800 Sobic009G175800--Sobic004G242800 Sobic009G175800--Sobic002G287600 Sobic009G175800--Sobic008G072800 Sobic004G299850 Sobic004G299850 Sobic009G175800--Sobic004G299850 Sobic002G012100 Sobic002G012100 Sobic009G175800--Sobic002G012100 Sobic001G167000 Sobic001G167000 Sobic009G175800--Sobic001G167000 Sobic009G175800--Sobic004G342200 Sobic006G268900 Sobic006G268900 Sobic009G175800--Sobic006G268900 Sobic006G082100 Sobic006G082100 Sobic003G262500--Sobic006G082100 Sobic003G262500--Sobic009G181900 Sobic003G262500--Sobic009G112500 Sobic002G377400 Sobic002G377400 Sobic003G262500--Sobic002G377400 Sobic010G249600 Sobic010G249600 Sobic003G262500--Sobic010G249600 Sobic010G105900 Sobic010G105900 Sobic003G262500--Sobic010G105900 Sobic003G262500--Sobic006G249600 Sobic002G387000 Sobic002G387000 Sobic003G262500--Sobic002G387000 Sobic003G262500--Sobic002G398600 Sobic010G242000 Sobic010G242000 Sobic005G025400--Sobic010G242000 Sobic005G025400--Sobic003G440500 Sobic005G025400--Sobic002G399000 Sobic006G170800 Sobic006G170800 Sobic005G025400--Sobic006G170800 Sobic005G025400--Sobic001G350300 Sobic005G025400--Sobic009G223900 Sobic002G085600 Sobic002G085600 Sobic005G025400--Sobic002G085600 Sobic004G202750 Sobic004G202750 Sobic005G025400--Sobic004G202750 Sobic001G350800 Sobic001G350800 Sobic005G025400--Sobic001G350800 Sobic002G398600--Sobic006G249600 Sobic002G398600--Sobic004G173200 Sobic002G398600--Sobic003G263900 Sobic002G398600--Sobic002G187900 Sobic002G398600--Sobic009G223900 Sobic008G192900 Sobic008G192900 Sobic002G398600--Sobic008G192900 Sobic002G398600--Sobic001G212900 Sobic008G103400 Sobic008G103400 Sobic002G398600--Sobic008G103400 Sobic008G016800 Sobic008G016800 Sobic002G398600--Sobic008G016800
Octagon: transcription factors


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