Gene annotation
Transcriptome id Sobic.008G139500.1
Synonym Sb08g019030
Functional annotation transmembrane amino acid transporter protein, putative, expressed
UniProt C5YQB6
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF249
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology K15015; SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39130 : Transmembrane amino acid transporter family protein
RAP-DB (Rice) LOC_Os12g38570.1 : transmembrane amino acid transporter protein, putative, expressed
MaizeGDB (Corn) Zm00025a004288 , Zm00025a025396
Brachypodium KQJ86187
Barley HORVU4Hr1G022660.2 , HORVU4Hr1G022660.3 , HORVU4Hr1G022660.1 , HORVU5Hr1G020560.2 , HORVU5Hr1G020560.3 , HORVU5Hr1G020560.1 , HORVU5Hr1G020560.6 , HORVU5Hr1G020560.7 , HORVU5Hr1G020560.4 , HORVU5Hr1G020560.5 , HORVU2Hr1G075350.1 , HORVU2Hr1G075350.2 , HORVU2Hr1G075350.3
Wheat TraesCS5B02G084900 , TraesCS5A02G081500 , TraesCS5D02G091100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G028600 OsSub40 - Putative Subtilisin homologue, expressed -
2 Sobic.009G008000 transcription factor Dp, putative, expressed -
3 Sobic.003G100600 PEPC(PubMedID : 19549309)@"BTPC, as Class-2 PEPC"(PubMedID : 2308851)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
4 Sobic.004G002300 START domain containing protein, expressed -
5 Sobic.004G190400 expressed protein -
6 Sobic.002G035733 - -
7 Sobic.001G315000 fringe-related protein, putative, expressed -
8 Sobic.007G109301 - -
9 Sobic.002G189500 expressed protein -
10 Sobic.005G220250 - -
11 Sobic.008G136700 expressed protein -
12 Sobic.001G029300 anthranilate synthase component I-1, chloroplast precursor, putative, expressed K01657: anthranilate synthase component I
13 Sobic.001G163666 - -
14 Sobic.006G266400 B3 DNA binding domain containing protein, expressed -
15 Sobic.009G145000 early-responsive to dehydration protein-related, putative, expressed -
16 Sobic.010G061600 - -
17 Sobic.005G037600 - -
18 Sobic.002G060101 - -
19 Sobic.004G203150 - -
20 Sobic.010G242600 OsFBDUF52 - F-box and DUF domain containing protein, expressed -


Gene co-expression network
sample Sobic008G139500 Sobic008G139500 Sobic006G028600 Sobic006G028600 Sobic008G139500--Sobic006G028600 Sobic009G008000 Sobic009G008000 Sobic008G139500--Sobic009G008000 Sobic003G100600 Sobic003G100600 Sobic008G139500--Sobic003G100600 Sobic004G002300 Sobic004G002300 Sobic008G139500--Sobic004G002300 Sobic004G190400 Sobic004G190400 Sobic008G139500--Sobic004G190400 Sobic002G035733 Sobic002G035733 Sobic008G139500--Sobic002G035733 Sobic001G315000 Sobic001G315000 Sobic008G139500--Sobic001G315000 Sobic007G109301 Sobic007G109301 Sobic008G139500--Sobic007G109301 Sobic002G189500 Sobic002G189500 Sobic008G139500--Sobic002G189500 Sobic006G028600--Sobic004G002300 Sobic006G028600--Sobic001G315000 Sobic006G028600--Sobic003G100600 Sobic006G059100 Sobic006G059100 Sobic006G028600--Sobic006G059100 Sobic001G024900 Sobic001G024900 Sobic006G028600--Sobic001G024900 Sobic001G306500 Sobic001G306500 Sobic006G028600--Sobic001G306500 Sobic007G222100 Sobic007G222100 Sobic006G028600--Sobic007G222100 Sobic001G288400 Sobic001G288400 Sobic006G028600--Sobic001G288400 Sobic010G051000 Sobic010G051000 Sobic006G028600--Sobic010G051000 Sobic009G048700 Sobic009G048700 Sobic009G008000--Sobic009G048700 Sobic007G094700 Sobic007G094700 Sobic009G008000--Sobic007G094700 Sobic004G203150 Sobic004G203150 Sobic009G008000--Sobic004G203150 Sobic001G417700 Sobic001G417700 Sobic009G008000--Sobic001G417700 Sobic009G145000 Sobic009G145000 Sobic009G008000--Sobic009G145000 Sobic007G219601 Sobic007G219601 Sobic009G008000--Sobic007G219601 Sobic008G155700 Sobic008G155700 Sobic009G008000--Sobic008G155700 Sobic002G418300 Sobic002G418300 Sobic009G008000--Sobic002G418300 Sobic009G008000--Sobic002G189500 Sobic009G060000 Sobic009G060000 Sobic003G100600--Sobic009G060000 Sobic003G100600--Sobic004G002300 Sobic003G100600--Sobic006G059100 Sobic002G049700 Sobic002G049700 Sobic003G100600--Sobic002G049700 Sobic001G188100 Sobic001G188100 Sobic003G100600--Sobic001G188100 Sobic007G001800 Sobic007G001800 Sobic003G100600--Sobic007G001800 Sobic005G191300 Sobic005G191300 Sobic003G100600--Sobic005G191300 Sobic009G110700 Sobic009G110700 Sobic003G100600--Sobic009G110700 Sobic001G409000 Sobic001G409000 Sobic003G100600--Sobic001G409000 Sobic004G002300--Sobic006G028600 Sobic009G091600 Sobic009G091600 Sobic004G002300--Sobic009G091600 Sobic006G236300 Sobic006G236300 Sobic004G002300--Sobic006G236300 Sobic007G112400 Sobic007G112400 Sobic004G002300--Sobic007G112400 Sobic009G091300 Sobic009G091300 Sobic004G002300--Sobic009G091300 Sobic005G110120 Sobic005G110120 Sobic004G002300--Sobic005G110120 Sobic008G027900 Sobic008G027900 Sobic004G002300--Sobic008G027900 Sobic005G142400 Sobic005G142400 Sobic004G002300--Sobic005G142400 Sobic006G195000 Sobic006G195000 Sobic004G002300--Sobic006G195000 Sobic004G190400--Sobic002G189500 Sobic006G266400 Sobic006G266400 Sobic004G190400--Sobic006G266400 Sobic010G242600 Sobic010G242600 Sobic004G190400--Sobic010G242600 Sobic001G029300 Sobic001G029300 Sobic004G190400--Sobic001G029300 Sobic001G163666 Sobic001G163666 Sobic004G190400--Sobic001G163666 Sobic004G190400--Sobic002G035733 Sobic006G236400 Sobic006G236400 Sobic004G190400--Sobic006G236400 Sobic002G104801 Sobic002G104801 Sobic004G190400--Sobic002G104801 Sobic010G177200 Sobic010G177200 Sobic004G190400--Sobic010G177200 Sobic002G035733--Sobic004G190400 Sobic002G035733--Sobic001G163666 Sobic002G035733--Sobic002G189500 Sobic004G255900 Sobic004G255900 Sobic002G035733--Sobic004G255900 Sobic002G035733--Sobic001G029300 Sobic004G120600 Sobic004G120600 Sobic002G035733--Sobic004G120600 Sobic002G333001 Sobic002G333001 Sobic002G035733--Sobic002G333001 Sobic009G152000 Sobic009G152000 Sobic002G035733--Sobic009G152000 Sobic002G035733--Sobic010G242600 Sobic001G315000--Sobic006G028600 Sobic001G315000--Sobic004G002300 Sobic001G315000--Sobic006G059100 Sobic001G500900 Sobic001G500900 Sobic001G315000--Sobic001G500900 Sobic001G135950 Sobic001G135950 Sobic001G315000--Sobic001G135950 Sobic006G215500 Sobic006G215500 Sobic001G315000--Sobic006G215500 Sobic004G071900 Sobic004G071900 Sobic001G315000--Sobic004G071900 Sobic002G125100 Sobic002G125100 Sobic001G315000--Sobic002G125100 Sobic006G022700 Sobic006G022700 Sobic001G315000--Sobic006G022700 Sobic010G061600 Sobic010G061600 Sobic007G109301--Sobic010G061600 Sobic007G109301--Sobic004G190400 Sobic007G109301--Sobic002G189500 Sobic005G220250 Sobic005G220250 Sobic007G109301--Sobic005G220250 Sobic007G109301--Sobic009G145000 Sobic007G109301--Sobic002G035733 Sobic007G109301--Sobic001G029300 Sobic007G109301--Sobic004G203150 Sobic007G109301--Sobic001G163666 Sobic002G189500--Sobic004G190400 Sobic002G189500--Sobic006G266400 Sobic002G189500--Sobic001G029300 Sobic002G189500--Sobic010G242600 Sobic002G189500--Sobic001G163666 Sobic002G101600 Sobic002G101600 Sobic002G189500--Sobic002G101600 Sobic002G189500--Sobic009G145000 Sobic001G240600 Sobic001G240600 Sobic002G189500--Sobic001G240600 Sobic002G189500--Sobic010G177200
Octagon: transcription factors


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