Gene annotation
Transcriptome id Sobic.002G264900.1
Synonym Sb02g029950, ATEIF3G2, EIF3G2
Functional annotation RNA recognition motif containing protein, putative, expressed
UniProt C5X5F3
Pfam PF00076
Panther DB PTHR10352 PTHR10352:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003676; nucleic acid binding GO:0005852eukaryotic translation initiation factor 3 complex GO:0005737cytoplasm GO:0003743translation initiation factor activity


Orthologs (automatic annotation)
TAIR AT3G11400 : eukaryotic translation initiation factor 3G1
RAP-DB (Rice) LOC_Os05g23800.1 : RNA recognition motif containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G076850 - -
2 Sobic.006G077600 phosphatidylinositol N-acetylglucosaminyltransferase subunit P, putative, expressed K03861: PIGP, GPI19, phosphatidylinositol N-acetylglucosaminyltransferase subunit P
3 Sobic.002G313100 STE_PAK_Ste20_MST_like.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08838: serine/threonine-protein kinase 24/25/MST4
4 Sobic.002G030400 SWIM zinc finger family protein, putative, expressed -
5 Sobic.001G051400 aminoacyl-tRNA synthetase, putative, expressed -
6 Sobic.004G270200 CPuORF20 - conserved peptide uORF-containing transcript, expressed K08829: male germ cell-associated kinase
7 Sobic.010G018900 pentatricopeptide repeat domain containing protein, putative, expressed -
8 Sobic.006G237500 PPR repeat domain containing protein, putative, expressed -
9 Sobic.002G348400 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
10 Sobic.002G322400 OsPDIL5-4 protein disulfide isomerase PDIL5-4, expressed -
11 Sobic.001G072900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
12 Sobic.001G312700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@selenium-binding protein-like, putative, expressed -
13 Sobic.002G392400 expressed protein -
14 Sobic.001G518200 - K06928: nucleoside-triphosphatase
15 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
16 Sobic.001G117900 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
17 Sobic.008G087200 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
18 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
19 Sobic.005G123400 expressed protein -
20 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin


Gene co-expression network
sample Sobic002G264900 Sobic002G264900 Sobic004G076850 Sobic004G076850 Sobic002G264900--Sobic004G076850 Sobic006G077600 Sobic006G077600 Sobic002G264900--Sobic006G077600 Sobic002G313100 Sobic002G313100 Sobic002G264900--Sobic002G313100 Sobic002G030400 Sobic002G030400 Sobic002G264900--Sobic002G030400 Sobic001G051400 Sobic001G051400 Sobic002G264900--Sobic001G051400 Sobic004G270200 Sobic004G270200 Sobic002G264900--Sobic004G270200 Sobic010G018900 Sobic010G018900 Sobic002G264900--Sobic010G018900 Sobic006G237500 Sobic006G237500 Sobic002G264900--Sobic006G237500 Sobic002G348400 Sobic002G348400 Sobic002G264900--Sobic002G348400 Sobic004G076850--Sobic006G077600 Sobic004G076850--Sobic002G264900 Sobic001G267500 Sobic001G267500 Sobic004G076850--Sobic001G267500 Sobic004G076850--Sobic004G270200 Sobic004G204000 Sobic004G204000 Sobic004G076850--Sobic004G204000 Sobic001G072900 Sobic001G072900 Sobic004G076850--Sobic001G072900 Sobic005G123400 Sobic005G123400 Sobic004G076850--Sobic005G123400 Sobic004G076850--Sobic002G313100 Sobic002G380700 Sobic002G380700 Sobic004G076850--Sobic002G380700 Sobic006G077600--Sobic002G313100 Sobic006G077600--Sobic001G072900 Sobic001G487000 Sobic001G487000 Sobic006G077600--Sobic001G487000 Sobic001G541601 Sobic001G541601 Sobic006G077600--Sobic001G541601 Sobic010G196300 Sobic010G196300 Sobic006G077600--Sobic010G196300 Sobic006G077600--Sobic004G076850 Sobic003G293100 Sobic003G293100 Sobic006G077600--Sobic003G293100 Sobic008G166100 Sobic008G166100 Sobic006G077600--Sobic008G166100 Sobic009G201000 Sobic009G201000 Sobic006G077600--Sobic009G201000 Sobic002G392400 Sobic002G392400 Sobic002G313100--Sobic002G392400 Sobic006G232800 Sobic006G232800 Sobic002G313100--Sobic006G232800 Sobic007G105700 Sobic007G105700 Sobic002G313100--Sobic007G105700 Sobic003G004800 Sobic003G004800 Sobic002G313100--Sobic003G004800 Sobic007G086600 Sobic007G086600 Sobic002G313100--Sobic007G086600 Sobic003G293400 Sobic003G293400 Sobic002G313100--Sobic003G293400 Sobic005G087300 Sobic005G087300 Sobic002G313100--Sobic005G087300 Sobic001G280500 Sobic001G280500 Sobic002G313100--Sobic001G280500 Sobic001G076600 Sobic001G076600 Sobic002G313100--Sobic001G076600 Sobic001G380700 Sobic001G380700 Sobic002G030400--Sobic001G380700 Sobic001G131900 Sobic001G131900 Sobic002G030400--Sobic001G131900 Sobic002G239400 Sobic002G239400 Sobic002G030400--Sobic002G239400 Sobic003G352900 Sobic003G352900 Sobic002G030400--Sobic003G352900 Sobic002G030400--Sobic003G293400 Sobic002G030400--Sobic002G313100 Sobic004G298600 Sobic004G298600 Sobic002G030400--Sobic004G298600 Sobic003G376900 Sobic003G376900 Sobic002G030400--Sobic003G376900 Sobic004G213400 Sobic004G213400 Sobic002G030400--Sobic004G213400 Sobic002G066800 Sobic002G066800 Sobic001G051400--Sobic002G066800 Sobic007G034200 Sobic007G034200 Sobic001G051400--Sobic007G034200 Sobic003G393200 Sobic003G393200 Sobic001G051400--Sobic003G393200 Sobic003G010900 Sobic003G010900 Sobic001G051400--Sobic003G010900 Sobic009G120400 Sobic009G120400 Sobic001G051400--Sobic009G120400 Sobic006G191200 Sobic006G191200 Sobic001G051400--Sobic006G191200 Sobic001G051400--Sobic005G087300 Sobic002G078100 Sobic002G078100 Sobic001G051400--Sobic002G078100 Sobic001G051400--Sobic005G123400 Sobic010G237650 Sobic010G237650 Sobic004G270200--Sobic010G237650 Sobic005G216800 Sobic005G216800 Sobic004G270200--Sobic005G216800 Sobic003G402900 Sobic003G402900 Sobic004G270200--Sobic003G402900 Sobic003G397100 Sobic003G397100 Sobic004G270200--Sobic003G397100 Sobic002G147100 Sobic002G147100 Sobic004G270200--Sobic002G147100 Sobic004G270200--Sobic004G076850 Sobic004G270200--Sobic002G264900 Sobic010G073600 Sobic010G073600 Sobic004G270200--Sobic010G073600 Sobic004G270200--Sobic006G237500 Sobic002G308000 Sobic002G308000 Sobic010G018900--Sobic002G308000 Sobic010G257500 Sobic010G257500 Sobic010G018900--Sobic010G257500 Sobic004G007700 Sobic004G007700 Sobic010G018900--Sobic004G007700 Sobic010G018900--Sobic002G066800 Sobic010G038900 Sobic010G038900 Sobic010G018900--Sobic010G038900 Sobic002G271400 Sobic002G271400 Sobic010G018900--Sobic002G271400 Sobic010G269800 Sobic010G269800 Sobic010G018900--Sobic010G269800 Sobic009G063800 Sobic009G063800 Sobic010G018900--Sobic009G063800 Sobic006G272300 Sobic006G272300 Sobic010G018900--Sobic006G272300 Sobic006G237500--Sobic005G123400 Sobic006G237500--Sobic003G393200 Sobic007G030100 Sobic007G030100 Sobic006G237500--Sobic007G030100 Sobic010G112600 Sobic010G112600 Sobic006G237500--Sobic010G112600 Sobic004G353300 Sobic004G353300 Sobic006G237500--Sobic004G353300 Sobic001G052100 Sobic001G052100 Sobic006G237500--Sobic001G052100 Sobic006G237500--Sobic001G051400 Sobic003G194800 Sobic003G194800 Sobic006G237500--Sobic003G194800 Sobic004G215600 Sobic004G215600 Sobic006G237500--Sobic004G215600 Sobic010G153400 Sobic010G153400 Sobic002G348400--Sobic010G153400 Sobic002G348400--Sobic002G392400 Sobic002G348400--Sobic007G086600 Sobic001G117900 Sobic001G117900 Sobic002G348400--Sobic001G117900 Sobic001G305900 Sobic001G305900 Sobic002G348400--Sobic001G305900 Sobic001G309200 Sobic001G309200 Sobic002G348400--Sobic001G309200 Sobic002G348400--Sobic001G280500 Sobic002G348400--Sobic003G004800 Sobic001G188000 Sobic001G188000 Sobic002G348400--Sobic001G188000
Octagon: transcription factors


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