Gene annotation
Transcriptome id Sobic.001G312700.1,Sobic.001G312700.2
Synonym Sb01g030410
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
selenium-binding protein-like, putative, expressed
UniProt A0A1B6QM60
Pfam PF13812 PF14432 PF13041 PF01535
Panther DB PTHR24015 PTHR24015:SF908
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G25060 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os10g39460.1 : selenium-binding protein-like, putative, expressed
MaizeGDB (Corn) Zm00025a003190
Brachypodium KQJ97609
Barley HORVU1Hr1G052060.6 , HORVU1Hr1G052060.4 , HORVU1Hr1G052060.5 , HORVU1Hr1G052060.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G130000 STE_MEKK_ste11_MAP3K.21 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
2 Sobic.001G267500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat containing protein, expressed -
3 Sobic.003G377200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
4 Sobic.006G157800 glycosyl transferase 8 domain containing protein, putative, expressed -
5 Sobic.001G072900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
6 Sobic.008G020500 CDC45B - Putative DNA replication initiation protein, expressed K06628: cell division control protein 45
7 Sobic.004G043200 expressed protein -
8 Sobic.006G163650 - -
9 Sobic.002G264900 RNA recognition motif containing protein, putative, expressed -
10 Sobic.002G394200 expressed protein K15711: SMARCA3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3
11 Sobic.001G494300 DNA topoisomerase 3 protein, putative, expressed K03165: DNA topoisomerase III
12 Sobic.007G208500 expressed protein -
13 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
14 Sobic.001G247000 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
15 Sobic.009G228300 50S ribosomal protein L21, chloroplast precursor, putative, expressed K02888: RP-L21, MRPL21, large subunit ribosomal protein L21
16 Sobic.001G407100 PHD finger family protein, putative, expressed -
17 Sobic.006G245200 OsFBX239 - F-box domain containing protein, expressed -
18 Sobic.005G017100 pentatricopeptide, putative, expressed -
19 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
20 Sobic.004G198200 expressed protein -


Gene co-expression network
sample Sobic001G312700 Sobic001G312700 Sobic007G130000 Sobic007G130000 Sobic001G312700--Sobic007G130000 Sobic001G267500 Sobic001G267500 Sobic001G312700--Sobic001G267500 Sobic003G377200 Sobic003G377200 Sobic001G312700--Sobic003G377200 Sobic006G157800 Sobic006G157800 Sobic001G312700--Sobic006G157800 Sobic001G072900 Sobic001G072900 Sobic001G312700--Sobic001G072900 Sobic008G020500 Sobic008G020500 Sobic001G312700--Sobic008G020500 Sobic004G043200 Sobic004G043200 Sobic001G312700--Sobic004G043200 Sobic006G163650 Sobic006G163650 Sobic001G312700--Sobic006G163650 Sobic002G264900 Sobic002G264900 Sobic001G312700--Sobic002G264900 Sobic004G198200 Sobic004G198200 Sobic007G130000--Sobic004G198200 Sobic001G427400 Sobic001G427400 Sobic007G130000--Sobic001G427400 Sobic007G130000--Sobic008G020500 Sobic005G056800 Sobic005G056800 Sobic007G130000--Sobic005G056800 Sobic001G494300 Sobic001G494300 Sobic007G130000--Sobic001G494300 Sobic006G155900 Sobic006G155900 Sobic007G130000--Sobic006G155900 Sobic003G040100 Sobic003G040100 Sobic007G130000--Sobic003G040100 Sobic002G380700 Sobic002G380700 Sobic007G130000--Sobic002G380700 Sobic001G284900 Sobic001G284900 Sobic007G130000--Sobic001G284900 Sobic001G267500--Sobic001G072900 Sobic001G267500--Sobic003G377200 Sobic005G017100 Sobic005G017100 Sobic001G267500--Sobic005G017100 Sobic004G076850 Sobic004G076850 Sobic001G267500--Sobic004G076850 Sobic009G162900 Sobic009G162900 Sobic001G267500--Sobic009G162900 Sobic005G076650 Sobic005G076650 Sobic001G267500--Sobic005G076650 Sobic001G267500--Sobic001G312700 Sobic006G077600 Sobic006G077600 Sobic001G267500--Sobic006G077600 Sobic007G208500 Sobic007G208500 Sobic001G267500--Sobic007G208500 Sobic003G377200--Sobic001G267500 Sobic003G377200--Sobic007G208500 Sobic006G186200 Sobic006G186200 Sobic003G377200--Sobic006G186200 Sobic003G377200--Sobic006G163650 Sobic004G180600 Sobic004G180600 Sobic003G377200--Sobic004G180600 Sobic003G390300 Sobic003G390300 Sobic003G377200--Sobic003G390300 Sobic009G203400 Sobic009G203400 Sobic003G377200--Sobic009G203400 Sobic003G377200--Sobic005G076650 Sobic004G156600 Sobic004G156600 Sobic003G377200--Sobic004G156600 Sobic010G207700 Sobic010G207700 Sobic006G157800--Sobic010G207700 Sobic009G151100 Sobic009G151100 Sobic006G157800--Sobic009G151100 Sobic002G396200 Sobic002G396200 Sobic006G157800--Sobic002G396200 Sobic003G148400 Sobic003G148400 Sobic006G157800--Sobic003G148400 Sobic007G222600 Sobic007G222600 Sobic006G157800--Sobic007G222600 Sobic003G223100 Sobic003G223100 Sobic006G157800--Sobic003G223100 Sobic009G216300 Sobic009G216300 Sobic006G157800--Sobic009G216300 Sobic001G247000 Sobic001G247000 Sobic006G157800--Sobic001G247000 Sobic006G157800--Sobic001G312700 Sobic001G072900--Sobic001G267500 Sobic001G487000 Sobic001G487000 Sobic001G072900--Sobic001G487000 Sobic001G072900--Sobic006G077600 Sobic002G363700 Sobic002G363700 Sobic001G072900--Sobic002G363700 Sobic001G072900--Sobic003G377200 Sobic001G541601 Sobic001G541601 Sobic001G072900--Sobic001G541601 Sobic001G072900--Sobic007G208500 Sobic006G278900 Sobic006G278900 Sobic001G072900--Sobic006G278900 Sobic009G228300 Sobic009G228300 Sobic001G072900--Sobic009G228300 Sobic008G020500--Sobic004G198200 Sobic008G020500--Sobic003G040100 Sobic008G020500--Sobic006G155900 Sobic008G020500--Sobic001G494300 Sobic009G190400 Sobic009G190400 Sobic008G020500--Sobic009G190400 Sobic008G020500--Sobic007G130000 Sobic001G070200 Sobic001G070200 Sobic008G020500--Sobic001G070200 Sobic001G331100 Sobic001G331100 Sobic008G020500--Sobic001G331100 Sobic008G020500--Sobic004G156600 Sobic009G088401 Sobic009G088401 Sobic004G043200--Sobic009G088401 Sobic004G107400 Sobic004G107400 Sobic004G043200--Sobic004G107400 Sobic010G014900 Sobic010G014900 Sobic004G043200--Sobic010G014900 Sobic007G072400 Sobic007G072400 Sobic004G043200--Sobic007G072400 Sobic004G043200--Sobic003G390300 Sobic004G043200--Sobic005G076650 Sobic007G158400 Sobic007G158400 Sobic004G043200--Sobic007G158400 Sobic009G028600 Sobic009G028600 Sobic004G043200--Sobic009G028600 Sobic004G109500 Sobic004G109500 Sobic004G043200--Sobic004G109500 Sobic007G139000 Sobic007G139000 Sobic006G163650--Sobic007G139000 Sobic006G163650--Sobic010G014900 Sobic006G163650--Sobic004G107400 Sobic010G152700 Sobic010G152700 Sobic006G163650--Sobic010G152700 Sobic003G191800 Sobic003G191800 Sobic006G163650--Sobic003G191800 Sobic003G359200 Sobic003G359200 Sobic006G163650--Sobic003G359200 Sobic007G153300 Sobic007G153300 Sobic006G163650--Sobic007G153300 Sobic005G102200 Sobic005G102200 Sobic006G163650--Sobic005G102200 Sobic006G163650--Sobic007G158400 Sobic002G264900--Sobic004G076850 Sobic002G264900--Sobic006G077600 Sobic002G313100 Sobic002G313100 Sobic002G264900--Sobic002G313100 Sobic002G030400 Sobic002G030400 Sobic002G264900--Sobic002G030400 Sobic001G051400 Sobic001G051400 Sobic002G264900--Sobic001G051400 Sobic004G270200 Sobic004G270200 Sobic002G264900--Sobic004G270200 Sobic010G018900 Sobic010G018900 Sobic002G264900--Sobic010G018900 Sobic006G237500 Sobic006G237500 Sobic002G264900--Sobic006G237500 Sobic002G348400 Sobic002G348400 Sobic002G264900--Sobic002G348400
Octagon: transcription factors


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