Gene annotation
Transcriptome id Sobic.004G270200.2,Sobic.004G270200.1
Synonym Sb04g030800
Functional annotation CPuORF20 - conserved peptide uORF-containing transcript, expressed
UniProt A0A1Z5RPF6 , C5Y0E0
Pfam PF00069
Panther DB PTHR24055 PTHR24055:SF192
NCBI CDD KOG0661; MAPK related serine/threonine protein kinase
KEGG Orthology K08829; male germ cell-associated kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G19110 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g47220.2,LOC_Os02g47220.1 : CPuORF20 - conserved peptide uORF-containing transcript, expressed
MaizeGDB (Corn) Zm00025a021674 , Zm00025a032455
Brachypodium KQK00896
Barley HORVU6Hr1G068270.1 , HORVU6Hr1G068270.3 , HORVU6Hr1G068270.2 , HORVU0Hr1G016660.24 , HORVU0Hr1G016660.20 , HORVU0Hr1G016660.21 , HORVU0Hr1G016660.22 , HORVU0Hr1G016660.23 , HORVU0Hr1G016660.11 , HORVU0Hr1G016660.10 , HORVU0Hr1G016660.13 , HORVU0Hr1G016660.12 , HORVU0Hr1G016660.15 , HORVU0Hr1G016660.14 , HORVU0Hr1G016660.17 , HORVU0Hr1G016660.19 , HORVU0Hr1G016660.18 , HORVU0Hr1G016660.5 , HORVU0Hr1G016660.4 , HORVU0Hr1G016660.7 , HORVU0Hr1G016660.6 , HORVU0Hr1G016660.1 , HORVU0Hr1G016660.3 , HORVU0Hr1G016660.2 , HORVU0Hr1G016660.9 , HORVU0Hr1G016660.8
Wheat TraesCS6B02G296700 , TraesCS6B02G296700 , TraesCS6A02G269400 , TraesCS6D02G245500 , TraesCS6D02G245500 , TraesCS6D02G245500
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G270200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G237650 - -
2 Sobic.005G216800 RNA recognition motif containing protein, expressed -
3 Sobic.003G402900 HYS1, putative, expressed -
4 Sobic.003G397100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
5 Sobic.002G147100 esterase/lipase/thioesterase, putative, expressed -
6 Sobic.004G076850 - -
7 Sobic.002G264900 RNA recognition motif containing protein, putative, expressed -
8 Sobic.010G073600 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@auxin response factor, putative, expressed -
9 Sobic.006G237500 PPR repeat domain containing protein, putative, expressed -
10 Sobic.004G131100 expressed protein -
11 Sobic.003G045000 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
12 Sobic.006G215100 expressed protein -
13 Sobic.006G077600 phosphatidylinositol N-acetylglucosaminyltransferase subunit P, putative, expressed K03861: PIGP, GPI19, phosphatidylinositol N-acetylglucosaminyltransferase subunit P
14 Sobic.007G030100 galactosyltransferase family protein, putative, expressed -
15 Sobic.007G118050 - -
16 Sobic.002G342300 exostosin family domain containing protein, expressed -
17 Sobic.005G123400 expressed protein -
18 Sobic.008G084401 - -
19 Sobic.006G170900 growth regulator related protein, putative, expressed -
20 Sobic.001G448100 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2


Gene co-expression network
sample Sobic004G270200 Sobic004G270200 Sobic010G237650 Sobic010G237650 Sobic004G270200--Sobic010G237650 Sobic005G216800 Sobic005G216800 Sobic004G270200--Sobic005G216800 Sobic003G402900 Sobic003G402900 Sobic004G270200--Sobic003G402900 Sobic003G397100 Sobic003G397100 Sobic004G270200--Sobic003G397100 Sobic002G147100 Sobic002G147100 Sobic004G270200--Sobic002G147100 Sobic004G076850 Sobic004G076850 Sobic004G270200--Sobic004G076850 Sobic002G264900 Sobic002G264900 Sobic004G270200--Sobic002G264900 Sobic010G073600 Sobic010G073600 Sobic004G270200--Sobic010G073600 Sobic006G237500 Sobic006G237500 Sobic004G270200--Sobic006G237500 Sobic002G033600 Sobic002G033600 Sobic010G237650--Sobic002G033600 Sobic003G092066 Sobic003G092066 Sobic010G237650--Sobic003G092066 Sobic002G268900 Sobic002G268900 Sobic010G237650--Sobic002G268900 Sobic006G144000 Sobic006G144000 Sobic010G237650--Sobic006G144000 Sobic007G139400 Sobic007G139400 Sobic010G237650--Sobic007G139400 Sobic006G215100 Sobic006G215100 Sobic010G237650--Sobic006G215100 Sobic010G237650--Sobic010G073600 Sobic005G128000 Sobic005G128000 Sobic010G237650--Sobic005G128000 Sobic009G102000 Sobic009G102000 Sobic010G237650--Sobic009G102000 Sobic005G216800--Sobic006G237500 Sobic005G123400 Sobic005G123400 Sobic005G216800--Sobic005G123400 Sobic002G342300 Sobic002G342300 Sobic005G216800--Sobic002G342300 Sobic005G216800--Sobic010G237650 Sobic002G235900 Sobic002G235900 Sobic005G216800--Sobic002G235900 Sobic005G216800--Sobic009G102000 Sobic005G216800--Sobic003G397100 Sobic003G194800 Sobic003G194800 Sobic005G216800--Sobic003G194800 Sobic006G170900 Sobic006G170900 Sobic005G216800--Sobic006G170900 Sobic007G030100 Sobic007G030100 Sobic003G402900--Sobic007G030100 Sobic003G368400 Sobic003G368400 Sobic003G402900--Sobic003G368400 Sobic001G385000 Sobic001G385000 Sobic003G402900--Sobic001G385000 Sobic004G017900 Sobic004G017900 Sobic003G402900--Sobic004G017900 Sobic007G189100 Sobic007G189100 Sobic003G402900--Sobic007G189100 Sobic003G402900--Sobic002G147100 Sobic003G402900--Sobic006G215100 Sobic002G147200 Sobic002G147200 Sobic003G402900--Sobic002G147200 Sobic007G043700 Sobic007G043700 Sobic003G402900--Sobic007G043700 Sobic001G242300 Sobic001G242300 Sobic003G397100--Sobic001G242300 Sobic002G123600 Sobic002G123600 Sobic003G397100--Sobic002G123600 Sobic002G260700 Sobic002G260700 Sobic003G397100--Sobic002G260700 Sobic008G090300 Sobic008G090300 Sobic003G397100--Sobic008G090300 Sobic008G169400 Sobic008G169400 Sobic003G397100--Sobic008G169400 Sobic008G112100 Sobic008G112100 Sobic003G397100--Sobic008G112100 Sobic010G143600 Sobic010G143600 Sobic003G397100--Sobic010G143600 Sobic001G448100 Sobic001G448100 Sobic003G397100--Sobic001G448100 Sobic008G031200 Sobic008G031200 Sobic003G397100--Sobic008G031200 Sobic002G147100--Sobic002G147200 Sobic007G147400 Sobic007G147400 Sobic002G147100--Sobic007G147400 Sobic002G147100--Sobic007G030100 Sobic009G228400 Sobic009G228400 Sobic002G147100--Sobic009G228400 Sobic004G042900 Sobic004G042900 Sobic002G147100--Sobic004G042900 Sobic002G147100--Sobic009G102000 Sobic006G165800 Sobic006G165800 Sobic002G147100--Sobic006G165800 Sobic003G398400 Sobic003G398400 Sobic002G147100--Sobic003G398400 Sobic002G317400 Sobic002G317400 Sobic002G147100--Sobic002G317400 Sobic006G077600 Sobic006G077600 Sobic004G076850--Sobic006G077600 Sobic004G076850--Sobic002G264900 Sobic001G267500 Sobic001G267500 Sobic004G076850--Sobic001G267500 Sobic004G076850--Sobic004G270200 Sobic004G204000 Sobic004G204000 Sobic004G076850--Sobic004G204000 Sobic001G072900 Sobic001G072900 Sobic004G076850--Sobic001G072900 Sobic004G076850--Sobic005G123400 Sobic002G313100 Sobic002G313100 Sobic004G076850--Sobic002G313100 Sobic002G380700 Sobic002G380700 Sobic004G076850--Sobic002G380700 Sobic002G264900--Sobic004G076850 Sobic002G264900--Sobic006G077600 Sobic002G264900--Sobic002G313100 Sobic002G030400 Sobic002G030400 Sobic002G264900--Sobic002G030400 Sobic001G051400 Sobic001G051400 Sobic002G264900--Sobic001G051400 Sobic002G264900--Sobic004G270200 Sobic010G018900 Sobic010G018900 Sobic002G264900--Sobic010G018900 Sobic002G264900--Sobic006G237500 Sobic002G348400 Sobic002G348400 Sobic002G264900--Sobic002G348400 Sobic010G073600--Sobic006G215100 Sobic010G073600--Sobic010G237650 Sobic003G229400 Sobic003G229400 Sobic010G073600--Sobic003G229400 Sobic006G130200 Sobic006G130200 Sobic010G073600--Sobic006G130200 Sobic004G218300 Sobic004G218300 Sobic010G073600--Sobic004G218300 Sobic010G073600--Sobic005G128000 Sobic003G289100 Sobic003G289100 Sobic010G073600--Sobic003G289100 Sobic010G073600--Sobic006G144000 Sobic010G073600--Sobic003G402900 Sobic006G237500--Sobic005G123400 Sobic003G393200 Sobic003G393200 Sobic006G237500--Sobic003G393200 Sobic006G237500--Sobic007G030100 Sobic010G112600 Sobic010G112600 Sobic006G237500--Sobic010G112600 Sobic004G353300 Sobic004G353300 Sobic006G237500--Sobic004G353300 Sobic001G052100 Sobic001G052100 Sobic006G237500--Sobic001G052100 Sobic006G237500--Sobic001G051400 Sobic006G237500--Sobic003G194800 Sobic004G215600 Sobic004G215600 Sobic006G237500--Sobic004G215600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.