Gene annotation
Transcriptome id Sobic.004G131100.1,Sobic.004G131100.2
Synonym Sb04g011770
Functional annotation expressed protein
UniProt A0A194YPB6
Pfam PF12937
Panther DB PTHR32133 PTHR32133:SF149
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g18720.1 : expressed protein
MaizeGDB (Corn) Zm00025a019749
Brachypodium KQJ81982
Barley -
Wheat TraesCS3D02G455100 , TraesCS3A02G461700 , TraesCS3D02G457100 , TraesCS3B02G504300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G285800 expressed protein -
2 Sobic.002G219800 expressed protein -
3 Sobic.004G270200 CPuORF20 - conserved peptide uORF-containing transcript, expressed K08829: male germ cell-associated kinase
4 Sobic.010G254900 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K14321: NUPL2, NUP42, nucleoporin-like protein 2
5 Sobic.005G154700 OsFBX407 - F-box domain containing protein, expressed -
6 Sobic.002G098701 - -
7 Sobic.004G076850 - -
8 Sobic.003G037900 ZOS3-23 - C2H2 zinc finger protein, expressed K12848: U4/U6.U5 tri-snRNP component SNU23
9 Sobic.004G026100 tRNA methyltransferase, putative, expressed K03439: trmB, METTL1, tRNA (guanine-N7-)-methyltransferase
10 Sobic.006G077600 phosphatidylinositol N-acetylglucosaminyltransferase subunit P, putative, expressed K03861: PIGP, GPI19, phosphatidylinositol N-acetylglucosaminyltransferase subunit P
11 Sobic.009G184700 zinc finger C3HC4 type family protein, putative, expressed K10695: E3 ubiquitin-protein ligase RNF1/2
12 Sobic.010G199800 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1
13 Sobic.001G262500 expressed protein -
14 Sobic.001G316200 erythronate-4-phosphate dehydrogenase, putative, expressed -
15 Sobic.006G260900 exostosin family domain containing protein, expressed -
16 Sobic.009G000400 expressed protein -
17 Sobic.006G224300 APO, putative, expressed -
18 Sobic.010G042200 Rf1, mitochondrial precursor, putative, expressed -
19 Sobic.002G115500 PHD finger protein, putative, expressed -
20 Sobic.005G196950 - -


Gene co-expression network
sample Sobic004G131100 Sobic004G131100 Sobic001G285800 Sobic001G285800 Sobic004G131100--Sobic001G285800 Sobic002G219800 Sobic002G219800 Sobic004G131100--Sobic002G219800 Sobic004G270200 Sobic004G270200 Sobic004G131100--Sobic004G270200 Sobic010G254900 Sobic010G254900 Sobic004G131100--Sobic010G254900 Sobic005G154700 Sobic005G154700 Sobic004G131100--Sobic005G154700 Sobic002G098701 Sobic002G098701 Sobic004G131100--Sobic002G098701 Sobic004G076850 Sobic004G076850 Sobic004G131100--Sobic004G076850 Sobic003G037900 Sobic003G037900 Sobic004G131100--Sobic003G037900 Sobic004G026100 Sobic004G026100 Sobic004G131100--Sobic004G026100 Sobic001G285800--Sobic004G131100 Sobic001G285800--Sobic002G098701 Sobic002G067100 Sobic002G067100 Sobic001G285800--Sobic002G067100 Sobic006G073001 Sobic006G073001 Sobic001G285800--Sobic006G073001 Sobic007G090448 Sobic007G090448 Sobic001G285800--Sobic007G090448 Sobic010G267650 Sobic010G267650 Sobic001G285800--Sobic010G267650 Sobic001G285800--Sobic002G219800 Sobic001G262500 Sobic001G262500 Sobic001G285800--Sobic001G262500 Sobic001G316200 Sobic001G316200 Sobic001G285800--Sobic001G316200 Sobic002G219800--Sobic004G026100 Sobic005G034600 Sobic005G034600 Sobic002G219800--Sobic005G034600 Sobic002G219800--Sobic004G131100 Sobic007G216600 Sobic007G216600 Sobic002G219800--Sobic007G216600 Sobic003G086700 Sobic003G086700 Sobic002G219800--Sobic003G086700 Sobic010G123700 Sobic010G123700 Sobic002G219800--Sobic010G123700 Sobic003G128500 Sobic003G128500 Sobic002G219800--Sobic003G128500 Sobic002G219800--Sobic001G285800 Sobic010G217200 Sobic010G217200 Sobic002G219800--Sobic010G217200 Sobic010G237650 Sobic010G237650 Sobic004G270200--Sobic010G237650 Sobic005G216800 Sobic005G216800 Sobic004G270200--Sobic005G216800 Sobic003G402900 Sobic003G402900 Sobic004G270200--Sobic003G402900 Sobic003G397100 Sobic003G397100 Sobic004G270200--Sobic003G397100 Sobic002G147100 Sobic002G147100 Sobic004G270200--Sobic002G147100 Sobic004G270200--Sobic004G076850 Sobic002G264900 Sobic002G264900 Sobic004G270200--Sobic002G264900 Sobic010G073600 Sobic010G073600 Sobic004G270200--Sobic010G073600 Sobic006G237500 Sobic006G237500 Sobic004G270200--Sobic006G237500 Sobic003G212900 Sobic003G212900 Sobic010G254900--Sobic003G212900 Sobic002G422100 Sobic002G422100 Sobic010G254900--Sobic002G422100 Sobic006G281700 Sobic006G281700 Sobic010G254900--Sobic006G281700 Sobic007G218000 Sobic007G218000 Sobic010G254900--Sobic007G218000 Sobic001G308400 Sobic001G308400 Sobic010G254900--Sobic001G308400 Sobic003G180900 Sobic003G180900 Sobic010G254900--Sobic003G180900 Sobic010G204400 Sobic010G204400 Sobic010G254900--Sobic010G204400 Sobic001G091400 Sobic001G091400 Sobic010G254900--Sobic001G091400 Sobic001G452000 Sobic001G452000 Sobic010G254900--Sobic001G452000 Sobic004G012000 Sobic004G012000 Sobic005G154700--Sobic004G012000 Sobic005G154700--Sobic004G026100 Sobic004G197900 Sobic004G197900 Sobic005G154700--Sobic004G197900 Sobic009G040800 Sobic009G040800 Sobic005G154700--Sobic009G040800 Sobic005G015100 Sobic005G015100 Sobic005G154700--Sobic005G015100 Sobic005G127300 Sobic005G127300 Sobic005G154700--Sobic005G127300 Sobic009G000400 Sobic009G000400 Sobic005G154700--Sobic009G000400 Sobic010G235600 Sobic010G235600 Sobic005G154700--Sobic010G235600 Sobic007G079200 Sobic007G079200 Sobic005G154700--Sobic007G079200 Sobic002G098701--Sobic001G285800 Sobic001G152100 Sobic001G152100 Sobic002G098701--Sobic001G152100 Sobic004G153200 Sobic004G153200 Sobic002G098701--Sobic004G153200 Sobic006G122900 Sobic006G122900 Sobic002G098701--Sobic006G122900 Sobic009G184700 Sobic009G184700 Sobic002G098701--Sobic009G184700 Sobic002G098701--Sobic004G131100 Sobic001G117300 Sobic001G117300 Sobic002G098701--Sobic001G117300 Sobic001G375300 Sobic001G375300 Sobic002G098701--Sobic001G375300 Sobic002G098701--Sobic006G073001 Sobic006G077600 Sobic006G077600 Sobic004G076850--Sobic006G077600 Sobic004G076850--Sobic002G264900 Sobic001G267500 Sobic001G267500 Sobic004G076850--Sobic001G267500 Sobic004G076850--Sobic004G270200 Sobic004G204000 Sobic004G204000 Sobic004G076850--Sobic004G204000 Sobic001G072900 Sobic001G072900 Sobic004G076850--Sobic001G072900 Sobic005G123400 Sobic005G123400 Sobic004G076850--Sobic005G123400 Sobic002G313100 Sobic002G313100 Sobic004G076850--Sobic002G313100 Sobic002G380700 Sobic002G380700 Sobic004G076850--Sobic002G380700 Sobic004G134500 Sobic004G134500 Sobic003G037900--Sobic004G134500 Sobic001G316700 Sobic001G316700 Sobic003G037900--Sobic001G316700 Sobic008G075900 Sobic008G075900 Sobic003G037900--Sobic008G075900 Sobic002G166500 Sobic002G166500 Sobic003G037900--Sobic002G166500 Sobic006G248700 Sobic006G248700 Sobic003G037900--Sobic006G248700 Sobic003G037900--Sobic006G122900 Sobic008G093500 Sobic008G093500 Sobic003G037900--Sobic008G093500 Sobic001G423700 Sobic001G423700 Sobic003G037900--Sobic001G423700 Sobic003G284500 Sobic003G284500 Sobic003G037900--Sobic003G284500 Sobic001G371000 Sobic001G371000 Sobic004G026100--Sobic001G371000 Sobic004G026100--Sobic005G154700 Sobic003G248500 Sobic003G248500 Sobic004G026100--Sobic003G248500 Sobic009G030300 Sobic009G030300 Sobic004G026100--Sobic009G030300 Sobic005G009200 Sobic005G009200 Sobic004G026100--Sobic005G009200 Sobic002G421700 Sobic002G421700 Sobic004G026100--Sobic002G421700 Sobic004G026100--Sobic009G040800 Sobic008G117200 Sobic008G117200 Sobic004G026100--Sobic008G117200 Sobic004G026100--Sobic004G197900
Octagon: transcription factors


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