Gene annotation
Transcriptome id Sobic.006G260900.2,Sobic.006G260900.1
Synonym Sb06g032380
Functional annotation exostosin family domain containing protein, expressed
UniProt A0A1Z5RFL7 , C5YA41
Pfam PF03016
Panther DB PTHR11062 PTHR11062:SF60
NCBI CDD KOG1021; Acetylglucosaminyltransferase EXT1/exostosin 1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G34270 : Exostosin family protein
RAP-DB (Rice) LOC_Os04g57510.1 : exostosin family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a057346
Brachypodium KQJ85213
Barley -
Wheat TraesCS7D02G415500 , TraesCS7D02G415500 , TraesCS2D02G548000 , TraesCS2A02G547000 , TraesCS2B02G577800
Populus -


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cDNA sequences
Sobic.006G260900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G077600 phosphatidylinositol N-acetylglucosaminyltransferase subunit P, putative, expressed K03861: PIGP, GPI19, phosphatidylinositol N-acetylglucosaminyltransferase subunit P
2 Sobic.001G057400 expressed protein -
3 Sobic.001G141400 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
4 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
5 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
6 Sobic.009G252300 expressed protein -
7 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
8 Sobic.010G158000 dolichyl-phosphate beta-glycosyltransferase, putative, expressed -
9 Sobic.008G152700 expressed protein K07541: GPI mannosyltransferase 1 subunit X
10 Sobic.005G123400 expressed protein -
11 Sobic.001G149000 FAR1 family protein, expressed -
12 Sobic.003G393200 expressed protein -
13 Sobic.010G255900 DNL zinc finger domain containing protein, putative, expressed K17808: ZIM17, DNLZ, mitochondrial protein import protein ZIM17
14 Sobic.002G313100 STE_PAK_Ste20_MST_like.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08838: serine/threonine-protein kinase 24/25/MST4
15 Sobic.003G353700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
16 Sobic.002G147200 esterase/lipase/thioesterase, putative, expressed -
17 Sobic.001G043200 expressed protein -
18 Sobic.007G030100 galactosyltransferase family protein, putative, expressed -
19 Sobic.006G191000 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
20 Sobic.001G385000 nucleoside-triphosphatase, putative, expressed K14641: apyrase


Gene co-expression network
sample Sobic006G260900 Sobic006G260900 Sobic006G077600 Sobic006G077600 Sobic006G260900--Sobic006G077600 Sobic001G057400 Sobic001G057400 Sobic006G260900--Sobic001G057400 Sobic001G141400 Sobic001G141400 Sobic006G260900--Sobic001G141400 Sobic003G190200 Sobic003G190200 Sobic006G260900--Sobic003G190200 Sobic003G117800 Sobic003G117800 Sobic006G260900--Sobic003G117800 Sobic009G252300 Sobic009G252300 Sobic006G260900--Sobic009G252300 Sobic003G021600 Sobic003G021600 Sobic006G260900--Sobic003G021600 Sobic010G158000 Sobic010G158000 Sobic006G260900--Sobic010G158000 Sobic008G152700 Sobic008G152700 Sobic006G260900--Sobic008G152700 Sobic002G313100 Sobic002G313100 Sobic006G077600--Sobic002G313100 Sobic001G072900 Sobic001G072900 Sobic006G077600--Sobic001G072900 Sobic001G487000 Sobic001G487000 Sobic006G077600--Sobic001G487000 Sobic001G541601 Sobic001G541601 Sobic006G077600--Sobic001G541601 Sobic010G196300 Sobic010G196300 Sobic006G077600--Sobic010G196300 Sobic004G076850 Sobic004G076850 Sobic006G077600--Sobic004G076850 Sobic003G293100 Sobic003G293100 Sobic006G077600--Sobic003G293100 Sobic008G166100 Sobic008G166100 Sobic006G077600--Sobic008G166100 Sobic009G201000 Sobic009G201000 Sobic006G077600--Sobic009G201000 Sobic001G057400--Sobic003G117800 Sobic007G077532 Sobic007G077532 Sobic001G057400--Sobic007G077532 Sobic005G185500 Sobic005G185500 Sobic001G057400--Sobic005G185500 Sobic003G353700 Sobic003G353700 Sobic001G057400--Sobic003G353700 Sobic003G428000 Sobic003G428000 Sobic001G057400--Sobic003G428000 Sobic010G255900 Sobic010G255900 Sobic001G057400--Sobic010G255900 Sobic007G142600 Sobic007G142600 Sobic001G057400--Sobic007G142600 Sobic003G385300 Sobic003G385300 Sobic001G057400--Sobic003G385300 Sobic008G055500 Sobic008G055500 Sobic001G057400--Sobic008G055500 Sobic001G475300 Sobic001G475300 Sobic001G141400--Sobic001G475300 Sobic001G141400--Sobic009G252300 Sobic003G250400 Sobic003G250400 Sobic001G141400--Sobic003G250400 Sobic009G194000 Sobic009G194000 Sobic001G141400--Sobic009G194000 Sobic001G141400--Sobic003G190200 Sobic007G172700 Sobic007G172700 Sobic001G141400--Sobic007G172700 Sobic001G490900 Sobic001G490900 Sobic001G141400--Sobic001G490900 Sobic002G200000 Sobic002G200000 Sobic001G141400--Sobic002G200000 Sobic003G039900 Sobic003G039900 Sobic001G141400--Sobic003G039900 Sobic007G030100 Sobic007G030100 Sobic003G190200--Sobic007G030100 Sobic003G394500 Sobic003G394500 Sobic003G190200--Sobic003G394500 Sobic003G190200--Sobic007G172700 Sobic003G190200--Sobic003G021600 Sobic003G190200--Sobic009G252300 Sobic001G424800 Sobic001G424800 Sobic003G190200--Sobic001G424800 Sobic003G393200 Sobic003G393200 Sobic003G190200--Sobic003G393200 Sobic003G190200--Sobic003G428000 Sobic001G385000 Sobic001G385000 Sobic003G190200--Sobic001G385000 Sobic003G117800--Sobic001G424800 Sobic003G117800--Sobic003G385300 Sobic003G117800--Sobic003G394500 Sobic003G117800--Sobic001G057400 Sobic003G117800--Sobic008G152700 Sobic001G149000 Sobic001G149000 Sobic003G117800--Sobic001G149000 Sobic001G356200 Sobic001G356200 Sobic003G117800--Sobic001G356200 Sobic003G117800--Sobic001G385000 Sobic009G046900 Sobic009G046900 Sobic003G117800--Sobic009G046900 Sobic009G252300--Sobic003G428000 Sobic009G252300--Sobic003G190200 Sobic009G252300--Sobic001G149000 Sobic009G252300--Sobic001G141400 Sobic005G123400 Sobic005G123400 Sobic009G252300--Sobic005G123400 Sobic009G252300--Sobic003G117800 Sobic010G134650 Sobic010G134650 Sobic009G252300--Sobic010G134650 Sobic007G192400 Sobic007G192400 Sobic009G252300--Sobic007G192400 Sobic009G252300--Sobic008G152700 Sobic003G021600--Sobic009G194000 Sobic003G181700 Sobic003G181700 Sobic003G021600--Sobic003G181700 Sobic003G021600--Sobic003G190200 Sobic002G227500 Sobic002G227500 Sobic003G021600--Sobic002G227500 Sobic009G040325 Sobic009G040325 Sobic003G021600--Sobic009G040325 Sobic009G040250 Sobic009G040250 Sobic003G021600--Sobic009G040250 Sobic003G021600--Sobic003G394500 Sobic001G308400 Sobic001G308400 Sobic003G021600--Sobic001G308400 Sobic001G043200 Sobic001G043200 Sobic003G021600--Sobic001G043200 Sobic010G158000--Sobic010G255900 Sobic004G077300 Sobic004G077300 Sobic010G158000--Sobic004G077300 Sobic010G158000--Sobic008G152700 Sobic006G132600 Sobic006G132600 Sobic010G158000--Sobic006G132600 Sobic006G060000 Sobic006G060000 Sobic010G158000--Sobic006G060000 Sobic001G501900 Sobic001G501900 Sobic010G158000--Sobic001G501900 Sobic008G097900 Sobic008G097900 Sobic010G158000--Sobic008G097900 Sobic010G158000--Sobic003G385300 Sobic010G158000--Sobic008G055500 Sobic008G152700--Sobic001G149000 Sobic008G152700--Sobic003G385300 Sobic008G152700--Sobic003G117800 Sobic008G152700--Sobic004G077300 Sobic008G152700--Sobic009G046900 Sobic008G152700--Sobic007G172700 Sobic008G152700--Sobic003G428000 Sobic008G152700--Sobic003G394500 Sobic008G152700--Sobic001G385000
Octagon: transcription factors


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