Gene annotation
Transcriptome id Sobic.001G316200.2
Synonym Sb01g030710, AN
Functional annotation erythronate-4-phosphate dehydrogenase, putative, expressed
UniProt A0A1Z5S8J3
Pfam PF02826
Panther DB PTHR10996 PTHR10996:SF134
NCBI CDD KOG0067; Transcription factor CtBP
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G01510 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os10g38900.1 : erythronate-4-phosphate dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a003128 , Zm00025a000348
Brachypodium KQJ97571 , KQJ97572 , PNT78284
Barley HORVU1Hr1G049460.2 , HORVU1Hr1G049460.3 , HORVU1Hr1G049460.1 , HORVU1Hr1G049460.4
Wheat TraesCS1D02G191600 , TraesCS1D02G191600 , TraesCS1B02G193200 , TraesCS1A02G185300 , TraesCS1A02G185300 , TraesCS1B02G193200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G082900 expressed protein -
2 Sobic.003G008500 VHS and GAT domain containing protein, expressed -
3 Sobic.009G229600 tRNA-binding arm, putative, expressed -
4 Sobic.007G156200 glycoprotein 3-alpha-L-fucosyltransferase A, putative, expressed K00753: glycoprotein 3-alpha-L-fucosyltransferase
5 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
6 Sobic.007G118600 mitochondrial carrier protein, putative, expressed K15119: solute carrier family 25, member 39/40
7 Sobic.003G187200 phox domain-containing protein, putative, expressed -
8 Sobic.006G202200 ENTH domain containing protein, expressed K12471: epsin
9 Sobic.001G518400 EF hand family protein, putative, expressed -
10 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
11 Sobic.007G120500 Sec1 family transport protein, putative, expressed K12479: vacuolar protein sorting-associated protein 45
12 Sobic.002G200100 AGAP000554-PA, putative, expressed -
13 Sobic.006G173100 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
14 Sobic.001G371200 SAC3/GANP family protein, putative, expressed -
15 Sobic.005G025700 RNA recognition motif containing protein, putative, expressed K13093: HIV Tat-specific factor 1
16 Sobic.004G067700 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
17 Sobic.003G270600 adaptor complexes medium subunit family domain containing protein, expressed K12393: AP-1 complex subunit mu
18 Sobic.001G369000 adapitin protein, putative, expressed K12392: AP-1 complex subunit beta-1
19 Sobic.009G245800 protein of unknown function DUF1296 domain containing protein, expressed -
20 Sobic.002G164300 ZOS9-03 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic001G316200 Sobic001G316200 Sobic006G082900 Sobic006G082900 Sobic001G316200--Sobic006G082900 Sobic003G008500 Sobic003G008500 Sobic001G316200--Sobic003G008500 Sobic009G229600 Sobic009G229600 Sobic001G316200--Sobic009G229600 Sobic007G156200 Sobic007G156200 Sobic001G316200--Sobic007G156200 Sobic001G335900 Sobic001G335900 Sobic001G316200--Sobic001G335900 Sobic007G118600 Sobic007G118600 Sobic001G316200--Sobic007G118600 Sobic003G187200 Sobic003G187200 Sobic001G316200--Sobic003G187200 Sobic006G202200 Sobic006G202200 Sobic001G316200--Sobic006G202200 Sobic001G518400 Sobic001G518400 Sobic001G316200--Sobic001G518400 Sobic002G370900 Sobic002G370900 Sobic006G082900--Sobic002G370900 Sobic006G082900--Sobic003G008500 Sobic006G082900--Sobic006G202200 Sobic004G007300 Sobic004G007300 Sobic006G082900--Sobic004G007300 Sobic004G345700 Sobic004G345700 Sobic006G082900--Sobic004G345700 Sobic008G149800 Sobic008G149800 Sobic006G082900--Sobic008G149800 Sobic006G173100 Sobic006G173100 Sobic006G082900--Sobic006G173100 Sobic003G401000 Sobic003G401000 Sobic006G082900--Sobic003G401000 Sobic006G195700 Sobic006G195700 Sobic006G082900--Sobic006G195700 Sobic002G157300 Sobic002G157300 Sobic003G008500--Sobic002G157300 Sobic003G008500--Sobic006G082900 Sobic003G008500--Sobic002G370900 Sobic004G067700 Sobic004G067700 Sobic003G008500--Sobic004G067700 Sobic003G008500--Sobic003G401000 Sobic001G514000 Sobic001G514000 Sobic003G008500--Sobic001G514000 Sobic003G008500--Sobic006G173100 Sobic003G008500--Sobic006G202200 Sobic006G128800 Sobic006G128800 Sobic003G008500--Sobic006G128800 Sobic009G049400 Sobic009G049400 Sobic009G229600--Sobic009G049400 Sobic001G369000 Sobic001G369000 Sobic009G229600--Sobic001G369000 Sobic009G229600--Sobic001G335900 Sobic003G427600 Sobic003G427600 Sobic009G229600--Sobic003G427600 Sobic003G270600 Sobic003G270600 Sobic009G229600--Sobic003G270600 Sobic009G229600--Sobic006G202200 Sobic009G229600--Sobic001G518400 Sobic004G039600 Sobic004G039600 Sobic009G229600--Sobic004G039600 Sobic007G120500 Sobic007G120500 Sobic009G229600--Sobic007G120500 Sobic009G162100 Sobic009G162100 Sobic007G156200--Sobic009G162100 Sobic010G243400 Sobic010G243400 Sobic007G156200--Sobic010G243400 Sobic009G257200 Sobic009G257200 Sobic007G156200--Sobic009G257200 Sobic003G243700 Sobic003G243700 Sobic007G156200--Sobic003G243700 Sobic004G130400 Sobic004G130400 Sobic007G156200--Sobic004G130400 Sobic005G177700 Sobic005G177700 Sobic007G156200--Sobic005G177700 Sobic007G156200--Sobic003G270600 Sobic001G127000 Sobic001G127000 Sobic007G156200--Sobic001G127000 Sobic003G407100 Sobic003G407100 Sobic007G156200--Sobic003G407100 Sobic001G335900--Sobic001G369000 Sobic006G138000 Sobic006G138000 Sobic001G335900--Sobic006G138000 Sobic001G335900--Sobic001G518400 Sobic001G170100 Sobic001G170100 Sobic001G335900--Sobic001G170100 Sobic003G240700 Sobic003G240700 Sobic001G335900--Sobic003G240700 Sobic001G335900--Sobic009G229600 Sobic001G335900--Sobic009G049400 Sobic001G335900--Sobic007G120500 SobicK004100 SobicK004100 Sobic001G335900--SobicK004100 Sobic001G512700 Sobic001G512700 Sobic007G118600--Sobic001G512700 Sobic007G217000 Sobic007G217000 Sobic007G118600--Sobic007G217000 Sobic003G187400 Sobic003G187400 Sobic007G118600--Sobic003G187400 Sobic004G021100 Sobic004G021100 Sobic007G118600--Sobic004G021100 Sobic008G047800 Sobic008G047800 Sobic007G118600--Sobic008G047800 Sobic007G118600--Sobic006G173100 Sobic001G155000 Sobic001G155000 Sobic007G118600--Sobic001G155000 Sobic007G118600--Sobic004G067700 Sobic005G045300 Sobic005G045300 Sobic007G118600--Sobic005G045300 Sobic010G204400 Sobic010G204400 Sobic003G187200--Sobic010G204400 Sobic003G187200--Sobic004G345700 Sobic003G187200--Sobic004G039600 Sobic007G132100 Sobic007G132100 Sobic003G187200--Sobic007G132100 Sobic003G187200--Sobic006G195700 Sobic006G163800 Sobic006G163800 Sobic003G187200--Sobic006G163800 Sobic002G378200 Sobic002G378200 Sobic003G187200--Sobic002G378200 Sobic003G187500 Sobic003G187500 Sobic003G187200--Sobic003G187500 Sobic010G053800 Sobic010G053800 Sobic003G187200--Sobic010G053800 Sobic006G202200--Sobic003G008500 Sobic006G202200--Sobic004G345700 Sobic006G202200--Sobic006G082900 Sobic006G202200--Sobic009G229600 Sobic006G202200--Sobic001G518400 Sobic009G126600 Sobic009G126600 Sobic006G202200--Sobic009G126600 Sobic006G202200--Sobic003G401000 Sobic009G214900 Sobic009G214900 Sobic006G202200--Sobic009G214900 Sobic006G202200--Sobic008G149800 Sobic001G518400--Sobic001G170100 Sobic001G518400--Sobic006G138000 Sobic001G518400--Sobic001G335900 Sobic001G078100 Sobic001G078100 Sobic001G518400--Sobic001G078100 Sobic001G518400--Sobic009G229600 Sobic010G275500 Sobic010G275500 Sobic001G518400--Sobic010G275500 Sobic001G518400--Sobic006G202200 Sobic003G126600 Sobic003G126600 Sobic001G518400--Sobic003G126600 Sobic001G518400--Sobic001G369000
Octagon: transcription factors


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