Gene annotation
Transcriptome id Sobic.007G118600.1
Synonym MTM1, ATMTM1, Sb07g019430
Functional annotation mitochondrial carrier protein, putative, expressed
UniProt C5YKM3
Pfam PF00153
Panther DB PTHR24089 PTHR24089:SF397
NCBI CDD KOG0761; Mitochondrial carrier protein CGI-69
KEGG Orthology K15119; solute carrier family 25, member 39/40
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G27940 : manganese tracking factor for mitochondrial SOD2
RAP-DB (Rice) LOC_Os08g29720.2 : mitochondrial carrier protein, putative, expressed
MaizeGDB (Corn) Zm00025a006019 , Zm00025a030977
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G118600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G512700 myb/SANT domain protein, putative, expressed -
2 Sobic.007G217000 tetratricopeptide repeat domain containing protein, expressed K13342: PEX5, peroxin-5
3 Sobic.003G187400 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
4 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
5 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
6 Sobic.006G173100 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
7 Sobic.001G155000 DNA-directed RNA polymerase II subunit RPB2, putative, expressed K03010: RPB2, DNA-directed RNA polymerase II subunit RPB2
8 Sobic.004G067700 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
9 Sobic.005G045300 PX domain containing protein, putative, expressed K17925: sorting nexin-13
10 Sobic.002G315200 DNA-binding bromodomain-containing protein, putative, expressed -
11 Sobic.001G222500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
12 Sobic.008G067600 protein kinase PKN/PRK1, effector, putative, expressed -
13 Sobic.002G006900 tetratricopeptide repeat domain containing protein, expressed -
14 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
15 Sobic.001G114000 expressed protein -
16 Sobic.001G497300 protein kinase domain containing protein, expressed -
17 Sobic.007G104800 expressed protein -
18 Sobic.009G166300 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
19 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
20 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1


Gene co-expression network
sample Sobic007G118600 Sobic007G118600 Sobic001G512700 Sobic001G512700 Sobic007G118600--Sobic001G512700 Sobic007G217000 Sobic007G217000 Sobic007G118600--Sobic007G217000 Sobic003G187400 Sobic003G187400 Sobic007G118600--Sobic003G187400 Sobic004G021100 Sobic004G021100 Sobic007G118600--Sobic004G021100 Sobic008G047800 Sobic008G047800 Sobic007G118600--Sobic008G047800 Sobic006G173100 Sobic006G173100 Sobic007G118600--Sobic006G173100 Sobic001G155000 Sobic001G155000 Sobic007G118600--Sobic001G155000 Sobic004G067700 Sobic004G067700 Sobic007G118600--Sobic004G067700 Sobic005G045300 Sobic005G045300 Sobic007G118600--Sobic005G045300 Sobic001G512700--Sobic008G047800 Sobic002G006900 Sobic002G006900 Sobic001G512700--Sobic002G006900 Sobic003G248200 Sobic003G248200 Sobic001G512700--Sobic003G248200 Sobic001G497300 Sobic001G497300 Sobic001G512700--Sobic001G497300 Sobic001G512700--Sobic007G118600 Sobic001G512700--Sobic004G021100 Sobic001G512700--Sobic005G045300 Sobic002G297200 Sobic002G297200 Sobic001G512700--Sobic002G297200 Sobic008G067600 Sobic008G067600 Sobic001G512700--Sobic008G067600 Sobic001G114000 Sobic001G114000 Sobic007G217000--Sobic001G114000 Sobic007G217000--Sobic008G047800 Sobic009G166300 Sobic009G166300 Sobic007G217000--Sobic009G166300 Sobic007G217000--Sobic001G155000 Sobic001G474600 Sobic001G474600 Sobic007G217000--Sobic001G474600 Sobic007G011300 Sobic007G011300 Sobic007G217000--Sobic007G011300 Sobic007G217000--Sobic007G118600 Sobic002G310200 Sobic002G310200 Sobic007G217000--Sobic002G310200 Sobic007G217000--Sobic004G067700 Sobic002G157300 Sobic002G157300 Sobic003G187400--Sobic002G157300 Sobic005G149500 Sobic005G149500 Sobic003G187400--Sobic005G149500 Sobic009G040700 Sobic009G040700 Sobic003G187400--Sobic009G040700 Sobic001G094000 Sobic001G094000 Sobic003G187400--Sobic001G094000 Sobic003G187400--Sobic006G173100 Sobic006G060100 Sobic006G060100 Sobic003G187400--Sobic006G060100 Sobic003G401000 Sobic003G401000 Sobic003G187400--Sobic003G401000 Sobic004G196700 Sobic004G196700 Sobic003G187400--Sobic004G196700 Sobic007G104800 Sobic007G104800 Sobic003G187400--Sobic007G104800 Sobic009G056800 Sobic009G056800 Sobic004G021100--Sobic009G056800 Sobic007G026300 Sobic007G026300 Sobic004G021100--Sobic007G026300 Sobic004G021100--Sobic001G512700 Sobic004G021100--Sobic006G173100 Sobic004G021100--Sobic007G104800 Sobic004G274200 Sobic004G274200 Sobic004G021100--Sobic004G274200 Sobic004G205600 Sobic004G205600 Sobic004G021100--Sobic004G205600 Sobic004G021100--Sobic003G187400 Sobic004G021100--Sobic007G118600 Sobic008G047800--Sobic002G006900 Sobic004G084300 Sobic004G084300 Sobic008G047800--Sobic004G084300 Sobic008G047800--Sobic001G512700 Sobic008G047800--Sobic001G155000 Sobic009G040600 Sobic009G040600 Sobic008G047800--Sobic009G040600 Sobic008G047800--Sobic007G011300 Sobic008G047800--Sobic007G217000 Sobic008G047800--Sobic004G274200 Sobic002G309600 Sobic002G309600 Sobic008G047800--Sobic002G309600 Sobic001G090400 Sobic001G090400 Sobic006G173100--Sobic001G090400 Sobic006G173100--Sobic002G157300 Sobic006G173100--Sobic003G187400 Sobic002G197100 Sobic002G197100 Sobic006G173100--Sobic002G197100 Sobic006G173100--Sobic004G021100 Sobic006G032400 Sobic006G032400 Sobic006G173100--Sobic006G032400 Sobic006G173100--Sobic001G512700 Sobic006G173100--Sobic004G067700 Sobic002G370900 Sobic002G370900 Sobic006G173100--Sobic002G370900 Sobic001G155000--Sobic008G047800 Sobic001G155000--Sobic002G006900 Sobic003G200200 Sobic003G200200 Sobic001G155000--Sobic003G200200 Sobic001G155000--Sobic009G040600 Sobic001G222500 Sobic001G222500 Sobic001G155000--Sobic001G222500 Sobic001G155000--Sobic007G011300 Sobic008G153000 Sobic008G153000 Sobic001G155000--Sobic008G153000 Sobic010G053800 Sobic010G053800 Sobic001G155000--Sobic010G053800 Sobic001G155000--Sobic007G217000 Sobic004G067700--Sobic001G114000 Sobic004G067700--Sobic006G173100 Sobic004G067700--Sobic002G370900 Sobic004G067700--Sobic001G512700 Sobic004G067700--Sobic007G217000 Sobic009G126400 Sobic009G126400 Sobic004G067700--Sobic009G126400 Sobic004G067700--Sobic005G045300 Sobic003G008500 Sobic003G008500 Sobic004G067700--Sobic003G008500 Sobic004G067700--Sobic002G310200 Sobic005G045300--Sobic001G512700 Sobic003G408500 Sobic003G408500 Sobic005G045300--Sobic003G408500 Sobic010G129200 Sobic010G129200 Sobic005G045300--Sobic010G129200 Sobic003G445400 Sobic003G445400 Sobic005G045300--Sobic003G445400 Sobic005G045300--Sobic009G166300 Sobic004G031700 Sobic004G031700 Sobic005G045300--Sobic004G031700 Sobic006G128900 Sobic006G128900 Sobic005G045300--Sobic006G128900 Sobic005G045300--Sobic002G006900 Sobic008G024600 Sobic008G024600 Sobic005G045300--Sobic008G024600
Octagon: transcription factors


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