Gene annotation
Transcriptome id Sobic.001G285800.1
Synonym Sb01g028050
Functional annotation expressed protein
UniProt C5WQQ5
Pfam PF11712
Panther DB PTHR31394 PTHR31394:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G52980 : -
RAP-DB (Rice) LOC_Os02g13200.1 : expressed protein
MaizeGDB (Corn) Zm00025a003512
Brachypodium KQJ97959
Barley HORVU1Hr1G050810.1
Wheat TraesCS1B02G209300 , TraesCS1A02G194400
Populus -


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cDNA sequences
Sobic.001G285800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G131100 expressed protein -
2 Sobic.002G098701 - -
3 Sobic.002G067100 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
4 Sobic.006G073001 - -
5 Sobic.007G090448 - -
6 Sobic.010G267650 - -
7 Sobic.002G219800 expressed protein -
8 Sobic.001G262500 expressed protein -
9 Sobic.001G316200 erythronate-4-phosphate dehydrogenase, putative, expressed -
10 Sobic.010G061100 DUF292 domain containing protein, expressed -
11 Sobic.008G075900 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
12 Sobic.001G152100 SWI1, putative, expressed -
13 Sobic.003G374500 pentatricopeptide repeat domain containing protein, putative, expressed -
14 Sobic.001G375300 ulp1 protease family protein, putative, expressed K08592: sentrin-specific protease 1
15 Sobic.010G254900 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K14321: NUPL2, NUP42, nucleoporin-like protein 2
16 Sobic.009G125600 NLI interacting factor-like phosphatase, putative, expressed K18999: RNA polymerase II C-terminal domain phosphatase-like 3/4
17 Sobic.001G262900 hhH-GPD superfamily base excision DNA repair protein, putative, expressed K10801: methyl-CpG-binding domain protein 4
18 Sobic.003G432900 RNA recognition motif containing protein, putative, expressed -
19 Sobic.006G212600 M16 domain containing zinc peptidase, putative, expressed -
20 Sobic.009G184700 zinc finger C3HC4 type family protein, putative, expressed K10695: E3 ubiquitin-protein ligase RNF1/2


Gene co-expression network
sample Sobic001G285800 Sobic001G285800 Sobic004G131100 Sobic004G131100 Sobic001G285800--Sobic004G131100 Sobic002G098701 Sobic002G098701 Sobic001G285800--Sobic002G098701 Sobic002G067100 Sobic002G067100 Sobic001G285800--Sobic002G067100 Sobic006G073001 Sobic006G073001 Sobic001G285800--Sobic006G073001 Sobic007G090448 Sobic007G090448 Sobic001G285800--Sobic007G090448 Sobic010G267650 Sobic010G267650 Sobic001G285800--Sobic010G267650 Sobic002G219800 Sobic002G219800 Sobic001G285800--Sobic002G219800 Sobic001G262500 Sobic001G262500 Sobic001G285800--Sobic001G262500 Sobic001G316200 Sobic001G316200 Sobic001G285800--Sobic001G316200 Sobic004G131100--Sobic001G285800 Sobic004G131100--Sobic002G219800 Sobic004G270200 Sobic004G270200 Sobic004G131100--Sobic004G270200 Sobic010G254900 Sobic010G254900 Sobic004G131100--Sobic010G254900 Sobic005G154700 Sobic005G154700 Sobic004G131100--Sobic005G154700 Sobic004G131100--Sobic002G098701 Sobic004G076850 Sobic004G076850 Sobic004G131100--Sobic004G076850 Sobic003G037900 Sobic003G037900 Sobic004G131100--Sobic003G037900 Sobic004G026100 Sobic004G026100 Sobic004G131100--Sobic004G026100 Sobic002G098701--Sobic001G285800 Sobic001G152100 Sobic001G152100 Sobic002G098701--Sobic001G152100 Sobic004G153200 Sobic004G153200 Sobic002G098701--Sobic004G153200 Sobic006G122900 Sobic006G122900 Sobic002G098701--Sobic006G122900 Sobic009G184700 Sobic009G184700 Sobic002G098701--Sobic009G184700 Sobic002G098701--Sobic004G131100 Sobic001G117300 Sobic001G117300 Sobic002G098701--Sobic001G117300 Sobic001G375300 Sobic001G375300 Sobic002G098701--Sobic001G375300 Sobic002G098701--Sobic006G073001 Sobic002G067600 Sobic002G067600 Sobic002G067100--Sobic002G067600 Sobic006G052500 Sobic006G052500 Sobic002G067100--Sobic006G052500 Sobic001G127000 Sobic001G127000 Sobic002G067100--Sobic001G127000 Sobic001G262900 Sobic001G262900 Sobic002G067100--Sobic001G262900 Sobic003G142700 Sobic003G142700 Sobic002G067100--Sobic003G142700 Sobic003G084750 Sobic003G084750 Sobic002G067100--Sobic003G084750 Sobic003G051200 Sobic003G051200 Sobic002G067100--Sobic003G051200 Sobic006G174975 Sobic006G174975 Sobic002G067100--Sobic006G174975 Sobic007G010000 Sobic007G010000 Sobic002G067100--Sobic007G010000 Sobic006G073001--Sobic007G090448 Sobic005G003900 Sobic005G003900 Sobic006G073001--Sobic005G003900 Sobic006G073001--Sobic006G122900 Sobic002G166500 Sobic002G166500 Sobic006G073001--Sobic002G166500 Sobic002G106100 Sobic002G106100 Sobic006G073001--Sobic002G106100 Sobic006G210100 Sobic006G210100 Sobic006G073001--Sobic006G210100 Sobic006G073001--Sobic010G267650 Sobic009G251300 Sobic009G251300 Sobic006G073001--Sobic009G251300 Sobic004G123600 Sobic004G123600 Sobic006G073001--Sobic004G123600 Sobic007G090448--Sobic006G073001 Sobic008G026100 Sobic008G026100 Sobic007G090448--Sobic008G026100 Sobic007G090448--Sobic010G267650 Sobic002G224450 Sobic002G224450 Sobic007G090448--Sobic002G224450 Sobic004G121000 Sobic004G121000 Sobic007G090448--Sobic004G121000 Sobic005G139800 Sobic005G139800 Sobic007G090448--Sobic005G139800 Sobic001G022100 Sobic001G022100 Sobic007G090448--Sobic001G022100 Sobic001G240400 Sobic001G240400 Sobic007G090448--Sobic001G240400 Sobic009G209800 Sobic009G209800 Sobic007G090448--Sobic009G209800 Sobic010G267650--Sobic005G003900 Sobic003G128500 Sobic003G128500 Sobic010G267650--Sobic003G128500 Sobic010G267650--Sobic001G262500 Sobic006G111500 Sobic006G111500 Sobic010G267650--Sobic006G111500 Sobic010G267650--Sobic007G090448 Sobic009G230400 Sobic009G230400 Sobic010G267650--Sobic009G230400 Sobic010G267650--Sobic006G073001 Sobic004G310700 Sobic004G310700 Sobic010G267650--Sobic004G310700 Sobic007G159800 Sobic007G159800 Sobic010G267650--Sobic007G159800 Sobic002G219800--Sobic004G026100 Sobic005G034600 Sobic005G034600 Sobic002G219800--Sobic005G034600 Sobic002G219800--Sobic004G131100 Sobic007G216600 Sobic007G216600 Sobic002G219800--Sobic007G216600 Sobic003G086700 Sobic003G086700 Sobic002G219800--Sobic003G086700 Sobic010G123700 Sobic010G123700 Sobic002G219800--Sobic010G123700 Sobic002G219800--Sobic003G128500 Sobic002G219800--Sobic001G285800 Sobic010G217200 Sobic010G217200 Sobic002G219800--Sobic010G217200 Sobic006G212600 Sobic006G212600 Sobic001G262500--Sobic006G212600 Sobic001G262500--Sobic010G267650 Sobic005G076650 Sobic005G076650 Sobic001G262500--Sobic005G076650 Sobic005G130001 Sobic005G130001 Sobic001G262500--Sobic005G130001 Sobic004G043200 Sobic004G043200 Sobic001G262500--Sobic004G043200 Sobic007G016000 Sobic007G016000 Sobic001G262500--Sobic007G016000 Sobic003G284500 Sobic003G284500 Sobic001G262500--Sobic003G284500 Sobic007G072400 Sobic007G072400 Sobic001G262500--Sobic007G072400 Sobic001G516200 Sobic001G516200 Sobic001G262500--Sobic001G516200 Sobic006G082900 Sobic006G082900 Sobic001G316200--Sobic006G082900 Sobic003G008500 Sobic003G008500 Sobic001G316200--Sobic003G008500 Sobic009G229600 Sobic009G229600 Sobic001G316200--Sobic009G229600 Sobic007G156200 Sobic007G156200 Sobic001G316200--Sobic007G156200 Sobic001G335900 Sobic001G335900 Sobic001G316200--Sobic001G335900 Sobic007G118600 Sobic007G118600 Sobic001G316200--Sobic007G118600 Sobic003G187200 Sobic003G187200 Sobic001G316200--Sobic003G187200 Sobic006G202200 Sobic006G202200 Sobic001G316200--Sobic006G202200 Sobic001G518400 Sobic001G518400 Sobic001G316200--Sobic001G518400
Octagon: transcription factors


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