Gene annotation
Transcriptome id Sobic.010G061100.1
Synonym
Functional annotation DUF292 domain containing protein, expressed
UniProt A0A194YHK8
Pfam PF03398
Panther DB PTHR12161
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G25420 : Regulator of Vps4 activity in the MVB pathway protein
RAP-DB (Rice) LOC_Os01g49350.1 : DUF292 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a027985
Brachypodium KQK09246
Barley HORVU3Hr1G063860.8 , HORVU3Hr1G063860.4 , HORVU3Hr1G063860.5 , HORVU3Hr1G063860.6 , HORVU3Hr1G063860.1 , HORVU3Hr1G063860.2 , HORVU3Hr1G063860.3
Wheat TraesCS3B02G296700 , TraesCS3D02G263400 , TraesCS3A02G263500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G212600 M16 domain containing zinc peptidase, putative, expressed -
2 Sobic.009G125600 NLI interacting factor-like phosphatase, putative, expressed K18999: RNA polymerase II C-terminal domain phosphatase-like 3/4
3 Sobic.004G043200 expressed protein -
4 Sobic.001G285800 expressed protein -
5 Sobic.002G270100 expressed protein K14795: ribosomal RNA-processing protein 36
6 Sobic.004G123300 oxidoreductase/ transition metal ion binding protein, putative, expressed -
7 Sobic.002G098701 - -
8 Sobic.001G262500 expressed protein -
9 Sobic.003G001550 - -
10 Sobic.004G237700 N-rich protein, putative, expressed -
11 Sobic.009G088401 - -
12 Sobic.003G284500 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
13 Sobic.006G248700 AAA-type ATPase family protein, putative, expressed -
14 Sobic.004G109500 - -
15 Sobic.007G072400 phosphoribosyl transferase, putative, expressed -
16 Sobic.010G098400 rRNA-processing protein EBP2, putative, expressed K14823: EBP2, rRNA-processing protein EBP2
17 Sobic.007G016000 - -
18 Sobic.003G037900 ZOS3-23 - C2H2 zinc finger protein, expressed K12848: U4/U6.U5 tri-snRNP component SNU23
19 Sobic.004G241700 PPR repeat domain containing protein, putative, expressed -
20 Sobic.008G024500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CRP11 - Cysteine-rich family protein precursor, expressed -


Gene co-expression network
sample Sobic010G061100 Sobic010G061100 Sobic006G212600 Sobic006G212600 Sobic010G061100--Sobic006G212600 Sobic009G125600 Sobic009G125600 Sobic010G061100--Sobic009G125600 Sobic004G043200 Sobic004G043200 Sobic010G061100--Sobic004G043200 Sobic001G285800 Sobic001G285800 Sobic010G061100--Sobic001G285800 Sobic002G270100 Sobic002G270100 Sobic010G061100--Sobic002G270100 Sobic004G123300 Sobic004G123300 Sobic010G061100--Sobic004G123300 Sobic002G098701 Sobic002G098701 Sobic010G061100--Sobic002G098701 Sobic001G262500 Sobic001G262500 Sobic010G061100--Sobic001G262500 Sobic003G001550 Sobic003G001550 Sobic010G061100--Sobic003G001550 Sobic006G212600--Sobic001G262500 Sobic006G212600--Sobic003G001550 Sobic009G088401 Sobic009G088401 Sobic006G212600--Sobic009G088401 Sobic007G072400 Sobic007G072400 Sobic006G212600--Sobic007G072400 Sobic005G098200 Sobic005G098200 Sobic006G212600--Sobic005G098200 Sobic006G212600--Sobic004G043200 Sobic007G016000 Sobic007G016000 Sobic006G212600--Sobic007G016000 Sobic003G284500 Sobic003G284500 Sobic006G212600--Sobic003G284500 Sobic003G173032 Sobic003G173032 Sobic006G212600--Sobic003G173032 Sobic001G345000 Sobic001G345000 Sobic009G125600--Sobic001G345000 Sobic003G396300 Sobic003G396300 Sobic009G125600--Sobic003G396300 Sobic005G229500 Sobic005G229500 Sobic009G125600--Sobic005G229500 Sobic009G125600--Sobic010G061100 Sobic006G248700 Sobic006G248700 Sobic009G125600--Sobic006G248700 Sobic003G037900 Sobic003G037900 Sobic009G125600--Sobic003G037900 Sobic008G075900 Sobic008G075900 Sobic009G125600--Sobic008G075900 Sobic003G019000 Sobic003G019000 Sobic009G125600--Sobic003G019000 Sobic003G259901 Sobic003G259901 Sobic009G125600--Sobic003G259901 Sobic004G043200--Sobic009G088401 Sobic004G107400 Sobic004G107400 Sobic004G043200--Sobic004G107400 Sobic010G014900 Sobic010G014900 Sobic004G043200--Sobic010G014900 Sobic004G043200--Sobic007G072400 Sobic003G390300 Sobic003G390300 Sobic004G043200--Sobic003G390300 Sobic005G076650 Sobic005G076650 Sobic004G043200--Sobic005G076650 Sobic007G158400 Sobic007G158400 Sobic004G043200--Sobic007G158400 Sobic009G028600 Sobic009G028600 Sobic004G043200--Sobic009G028600 Sobic004G109500 Sobic004G109500 Sobic004G043200--Sobic004G109500 Sobic004G131100 Sobic004G131100 Sobic001G285800--Sobic004G131100 Sobic001G285800--Sobic002G098701 Sobic002G067100 Sobic002G067100 Sobic001G285800--Sobic002G067100 Sobic006G073001 Sobic006G073001 Sobic001G285800--Sobic006G073001 Sobic007G090448 Sobic007G090448 Sobic001G285800--Sobic007G090448 Sobic010G267650 Sobic010G267650 Sobic001G285800--Sobic010G267650 Sobic002G219800 Sobic002G219800 Sobic001G285800--Sobic002G219800 Sobic001G285800--Sobic001G262500 Sobic001G316200 Sobic001G316200 Sobic001G285800--Sobic001G316200 Sobic009G050100 Sobic009G050100 Sobic002G270100--Sobic009G050100 Sobic002G270100--Sobic003G284500 Sobic010G050400 Sobic010G050400 Sobic002G270100--Sobic010G050400 Sobic002G248001 Sobic002G248001 Sobic002G270100--Sobic002G248001 Sobic002G270100--Sobic010G061100 Sobic001G157500 Sobic001G157500 Sobic002G270100--Sobic001G157500 Sobic002G283800 Sobic002G283800 Sobic002G270100--Sobic002G283800 Sobic002G270100--Sobic004G043200 Sobic003G211500 Sobic003G211500 Sobic002G270100--Sobic003G211500 Sobic007G027000 Sobic007G027000 Sobic004G123300--Sobic007G027000 Sobic001G381900 Sobic001G381900 Sobic004G123300--Sobic001G381900 Sobic007G123600 Sobic007G123600 Sobic004G123300--Sobic007G123600 Sobic004G123300--Sobic003G019000 Sobic004G241700 Sobic004G241700 Sobic004G123300--Sobic004G241700 Sobic004G119500 Sobic004G119500 Sobic004G123300--Sobic004G119500 Sobic004G123600 Sobic004G123600 Sobic004G123300--Sobic004G123600 Sobic004G123300--Sobic003G396300 Sobic009G137000 Sobic009G137000 Sobic004G123300--Sobic009G137000 Sobic002G098701--Sobic001G285800 Sobic001G152100 Sobic001G152100 Sobic002G098701--Sobic001G152100 Sobic004G153200 Sobic004G153200 Sobic002G098701--Sobic004G153200 Sobic006G122900 Sobic006G122900 Sobic002G098701--Sobic006G122900 Sobic009G184700 Sobic009G184700 Sobic002G098701--Sobic009G184700 Sobic002G098701--Sobic004G131100 Sobic001G117300 Sobic001G117300 Sobic002G098701--Sobic001G117300 Sobic001G375300 Sobic001G375300 Sobic002G098701--Sobic001G375300 Sobic002G098701--Sobic006G073001 Sobic001G262500--Sobic006G212600 Sobic001G262500--Sobic010G267650 Sobic001G262500--Sobic005G076650 Sobic005G130001 Sobic005G130001 Sobic001G262500--Sobic005G130001 Sobic001G262500--Sobic004G043200 Sobic001G262500--Sobic007G016000 Sobic001G262500--Sobic003G284500 Sobic001G262500--Sobic007G072400 Sobic001G516200 Sobic001G516200 Sobic001G262500--Sobic001G516200 Sobic003G001550--Sobic009G088401 Sobic003G001550--Sobic005G098200 Sobic003G001550--Sobic007G072400 Sobic008G098098 Sobic008G098098 Sobic003G001550--Sobic008G098098 Sobic008G119200 Sobic008G119200 Sobic003G001550--Sobic008G119200 Sobic003G001550--Sobic007G016000 Sobic004G180600 Sobic004G180600 Sobic003G001550--Sobic004G180600 Sobic005G231800 Sobic005G231800 Sobic003G001550--Sobic005G231800 Sobic003G001550--Sobic003G173032
Octagon: transcription factors


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