Gene annotation
Transcriptome id Sobic.002G270100.1
Synonym Sb02g030390
Functional annotation expressed protein
UniProt C5X632
Pfam PF06102
Panther DB PTHR21738 PTHR21738:SF0
NCBI CDD KOG3190; Uncharacterized conserved protein
KEGG Orthology K14795; ribosomal RNA-processing protein 36
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G12650 : -
RAP-DB (Rice) LOC_Os09g35670.1 : expressed protein
MaizeGDB (Corn) Zm00025a038702 , Zm00025a014392 , Zm00025a017046 , Zm00025a026766 , Zm00025a022743 , Zm00025a016428 , Zm00025a022335 , Zm00025a016538 , Zm00025a015427
Brachypodium KQJ91117
Barley -
Wheat TraesCS5B02G313600 , TraesCS5B02G313600 , TraesCS5A02G312600 , TraesCS5A02G312600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G050100 ATKINESIN-13A/KINESIN-13A, putative, expressed K11091: U1 small nuclear ribonucleoprotein A
2 Sobic.003G284500 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
3 Sobic.010G050400 methyltransferase-like protein 5, putative, expressed -
4 Sobic.002G248001 - -
5 Sobic.010G061100 DUF292 domain containing protein, expressed -
6 Sobic.001G157500 expressed protein -
7 Sobic.002G283800 AIG2-like family domain containing protein, expressed -
8 Sobic.004G043200 expressed protein -
9 Sobic.003G211500 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
10 Sobic.004G109500 - -
11 Sobic.006G122900 expressed protein K15360: STRA13, CENPX, centromere protein X
12 Sobic.004G180600 expressed protein K18172: COX assembly mitochondrial protein 2
13 Sobic.001G150800 expressed protein -
14 Sobic.001G303000 zinc finger family protein, putative, expressed -
15 Sobic.007G072400 phosphoribosyl transferase, putative, expressed -
16 Sobic.006G144800 expressed protein -
17 Sobic.006G177100 expressed protein K03671: thioredoxin 1
18 Sobic.009G125600 NLI interacting factor-like phosphatase, putative, expressed K18999: RNA polymerase II C-terminal domain phosphatase-like 3/4
19 Sobic.004G233500 trpH, putative, expressed K07053: 3',5'-nucleoside bisphosphate phosphatase
20 Sobic.009G088401 - -


Gene co-expression network
sample Sobic002G270100 Sobic002G270100 Sobic009G050100 Sobic009G050100 Sobic002G270100--Sobic009G050100 Sobic003G284500 Sobic003G284500 Sobic002G270100--Sobic003G284500 Sobic010G050400 Sobic010G050400 Sobic002G270100--Sobic010G050400 Sobic002G248001 Sobic002G248001 Sobic002G270100--Sobic002G248001 Sobic010G061100 Sobic010G061100 Sobic002G270100--Sobic010G061100 Sobic001G157500 Sobic001G157500 Sobic002G270100--Sobic001G157500 Sobic002G283800 Sobic002G283800 Sobic002G270100--Sobic002G283800 Sobic004G043200 Sobic004G043200 Sobic002G270100--Sobic004G043200 Sobic003G211500 Sobic003G211500 Sobic002G270100--Sobic003G211500 Sobic009G050100--Sobic003G284500 Sobic001G150800 Sobic001G150800 Sobic009G050100--Sobic001G150800 Sobic003G128500 Sobic003G128500 Sobic009G050100--Sobic003G128500 Sobic006G177100 Sobic006G177100 Sobic009G050100--Sobic006G177100 Sobic009G050100--Sobic002G270100 Sobic010G097400 Sobic010G097400 Sobic009G050100--Sobic010G097400 Sobic003G377200 Sobic003G377200 Sobic009G050100--Sobic003G377200 Sobic003G148500 Sobic003G148500 Sobic009G050100--Sobic003G148500 Sobic001G210700 Sobic001G210700 Sobic009G050100--Sobic001G210700 Sobic003G284500--Sobic003G128500 Sobic007G072400 Sobic007G072400 Sobic003G284500--Sobic007G072400 Sobic004G109500 Sobic004G109500 Sobic003G284500--Sobic004G109500 Sobic009G088401 Sobic009G088401 Sobic003G284500--Sobic009G088401 Sobic003G284500--Sobic009G050100 Sobic002G173600 Sobic002G173600 Sobic003G284500--Sobic002G173600 Sobic004G107400 Sobic004G107400 Sobic003G284500--Sobic004G107400 Sobic003G390300 Sobic003G390300 Sobic003G284500--Sobic003G390300 Sobic010G152700 Sobic010G152700 Sobic003G284500--Sobic010G152700 Sobic005G164500 Sobic005G164500 Sobic010G050400--Sobic005G164500 Sobic009G201200 Sobic009G201200 Sobic010G050400--Sobic009G201200 Sobic001G460500 Sobic001G460500 Sobic010G050400--Sobic001G460500 Sobic008G191500 Sobic008G191500 Sobic010G050400--Sobic008G191500 Sobic004G075200 Sobic004G075200 Sobic010G050400--Sobic004G075200 Sobic005G108801 Sobic005G108801 Sobic010G050400--Sobic005G108801 Sobic003G259600 Sobic003G259600 Sobic010G050400--Sobic003G259600 Sobic003G039500 Sobic003G039500 Sobic010G050400--Sobic003G039500 Sobic010G050400--Sobic002G270100 Sobic002G248001--Sobic002G270100 Sobic002G248001--Sobic010G050400 Sobic002G248001--Sobic005G164500 Sobic006G269900 Sobic006G269900 Sobic002G248001--Sobic006G269900 Sobic002G248001--Sobic005G108801 Sobic002G047000 Sobic002G047000 Sobic002G248001--Sobic002G047000 Sobic007G217100 Sobic007G217100 Sobic002G248001--Sobic007G217100 Sobic003G077300 Sobic003G077300 Sobic002G248001--Sobic003G077300 Sobic002G171300 Sobic002G171300 Sobic002G248001--Sobic002G171300 Sobic006G212600 Sobic006G212600 Sobic010G061100--Sobic006G212600 Sobic009G125600 Sobic009G125600 Sobic010G061100--Sobic009G125600 Sobic010G061100--Sobic004G043200 Sobic001G285800 Sobic001G285800 Sobic010G061100--Sobic001G285800 Sobic010G061100--Sobic002G270100 Sobic004G123300 Sobic004G123300 Sobic010G061100--Sobic004G123300 Sobic002G098701 Sobic002G098701 Sobic010G061100--Sobic002G098701 Sobic001G262500 Sobic001G262500 Sobic010G061100--Sobic001G262500 Sobic003G001550 Sobic003G001550 Sobic010G061100--Sobic003G001550 Sobic004G210101 Sobic004G210101 Sobic001G157500--Sobic004G210101 Sobic001G157500--Sobic001G150800 Sobic001G157500--Sobic009G050100 Sobic001G157500--Sobic003G284500 Sobic001G157500--Sobic010G097400 Sobic001G157500--Sobic002G270100 Sobic001G157500--Sobic006G177100 Sobic008G075900 Sobic008G075900 Sobic001G157500--Sobic008G075900 Sobic006G258400 Sobic006G258400 Sobic001G157500--Sobic006G258400 Sobic010G136900 Sobic010G136900 Sobic002G283800--Sobic010G136900 Sobic001G516800 Sobic001G516800 Sobic002G283800--Sobic001G516800 Sobic002G101800 Sobic002G101800 Sobic002G283800--Sobic002G101800 Sobic002G285450 Sobic002G285450 Sobic002G283800--Sobic002G285450 Sobic007G139000 Sobic007G139000 Sobic002G283800--Sobic007G139000 Sobic004G132400 Sobic004G132400 Sobic002G283800--Sobic004G132400 Sobic003G191800 Sobic003G191800 Sobic002G283800--Sobic003G191800 Sobic001G147400 Sobic001G147400 Sobic002G283800--Sobic001G147400 Sobic003G111600 Sobic003G111600 Sobic002G283800--Sobic003G111600 Sobic004G043200--Sobic009G088401 Sobic004G043200--Sobic004G107400 Sobic010G014900 Sobic010G014900 Sobic004G043200--Sobic010G014900 Sobic004G043200--Sobic007G072400 Sobic004G043200--Sobic003G390300 Sobic005G076650 Sobic005G076650 Sobic004G043200--Sobic005G076650 Sobic007G158400 Sobic007G158400 Sobic004G043200--Sobic007G158400 Sobic009G028600 Sobic009G028600 Sobic004G043200--Sobic009G028600 Sobic004G043200--Sobic004G109500 Sobic007G132000 Sobic007G132000 Sobic003G211500--Sobic007G132000 Sobic003G132300 Sobic003G132300 Sobic003G211500--Sobic003G132300 Sobic001G381900 Sobic001G381900 Sobic003G211500--Sobic001G381900 Sobic003G211500--Sobic004G132400 Sobic004G204500 Sobic004G204500 Sobic003G211500--Sobic004G204500 Sobic006G229300 Sobic006G229300 Sobic003G211500--Sobic006G229300 Sobic004G119500 Sobic004G119500 Sobic003G211500--Sobic004G119500 Sobic004G023400 Sobic004G023400 Sobic003G211500--Sobic004G023400 Sobic003G211500--Sobic001G147400
Octagon: transcription factors


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