Gene annotation
Transcriptome id Sobic.010G050400.2,Sobic.010G050400.1
Synonym Sb10g004380
Functional annotation methyltransferase-like protein 5, putative, expressed
UniProt A0A1W0VRH8 , C5Z4T8
Pfam PF05175 PF06325
Panther DB PTHR23290
NCBI CDD KOG3420; Predicted RNA methylase
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT4G28830 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os06g06730.1 : methyltransferase-like protein 5, putative, expressed
MaizeGDB (Corn) Zm00025a041603 , Zm00025a041607
Brachypodium KQK19482
Barley HORVU7Hr1G025730.6 , HORVU7Hr1G025730.7 , HORVU7Hr1G025730.4 , HORVU7Hr1G025730.5 , HORVU7Hr1G025730.2 , HORVU7Hr1G025730.3 , HORVU7Hr1G025730.1 , HORVU7Hr1G025730.8 , HORVU7Hr1G025730.9 , HORVU7Hr1G025730.10 , HORVU7Hr1G025730.11 , HORVU7Hr1G025730.12
Wheat TraesCS7A02G121800 , TraesCS7B02G020600 , TraesCS7D02G120300
Populus -


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cDNA sequences
Sobic.010G050400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G164500 expressed protein -
2 Sobic.009G201200 WD domain, G-beta repeat domain containing protein, expressed K14558: PWP2, periodic tryptophan protein 2
3 Sobic.001G460500 T-complex protein, putative, expressed K09495: CCT3, T-complex protein 1 subunit gamma
4 Sobic.008G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-acetylglucosaminyltransferase, putative, expressed -
5 Sobic.004G075200 protein kinase PKN/PRK1, effector, putative, expressed -
6 Sobic.005G108801 - -
7 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
8 Sobic.003G039500 expressed protein K06947: GRC3, polynucleotide 5'-hydroxyl-kinase GRC3/NOL9
9 Sobic.002G270100 expressed protein K14795: ribosomal RNA-processing protein 36
10 Sobic.009G050100 ATKINESIN-13A/KINESIN-13A, putative, expressed K11091: U1 small nuclear ribonucleoprotein A
11 Sobic.003G008600 eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed K15029: translation initiation factor 3 subunit L
12 Sobic.001G373800 MIF4G domain containing protein, putative, expressed K12882: NCBP1, nuclear cap-binding protein subunit 1
13 Sobic.001G280400 ankyrin repeat domain-containing protein 28, putative, expressed -
14 Sobic.007G217100 sas10/Utp3 family protein, expressed K14767: UTP3, U3 small nucleolar RNA-associated protein 3
15 Sobic.009G167800 protein kinase family protein, putative, expressed -
16 Sobic.005G034600 expressed protein -
17 Sobic.004G198900 expressed protein -
18 Sobic.002G427300 protein phosphotase protein, putative, expressed -
19 Sobic.001G373000 nucleoporin interacting component, putative, expressed K14309: NUP93, nuclear pore complex protein Nup93
20 Sobic.002G142700 PPR repeat containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G050400 Sobic010G050400 Sobic005G164500 Sobic005G164500 Sobic010G050400--Sobic005G164500 Sobic009G201200 Sobic009G201200 Sobic010G050400--Sobic009G201200 Sobic001G460500 Sobic001G460500 Sobic010G050400--Sobic001G460500 Sobic008G191500 Sobic008G191500 Sobic010G050400--Sobic008G191500 Sobic004G075200 Sobic004G075200 Sobic010G050400--Sobic004G075200 Sobic005G108801 Sobic005G108801 Sobic010G050400--Sobic005G108801 Sobic003G259600 Sobic003G259600 Sobic010G050400--Sobic003G259600 Sobic003G039500 Sobic003G039500 Sobic010G050400--Sobic003G039500 Sobic002G270100 Sobic002G270100 Sobic010G050400--Sobic002G270100 Sobic001G280400 Sobic001G280400 Sobic005G164500--Sobic001G280400 Sobic004G027000 Sobic004G027000 Sobic005G164500--Sobic004G027000 Sobic004G117800 Sobic004G117800 Sobic005G164500--Sobic004G117800 Sobic007G013300 Sobic007G013300 Sobic005G164500--Sobic007G013300 Sobic010G085200 Sobic010G085200 Sobic005G164500--Sobic010G085200 Sobic002G394800 Sobic002G394800 Sobic005G164500--Sobic002G394800 Sobic001G469200 Sobic001G469200 Sobic005G164500--Sobic001G469200 Sobic002G058700 Sobic002G058700 Sobic005G164500--Sobic002G058700 Sobic001G426100 Sobic001G426100 Sobic005G164500--Sobic001G426100 Sobic009G201200--Sobic010G050400 Sobic006G125700 Sobic006G125700 Sobic009G201200--Sobic006G125700 Sobic010G205900 Sobic010G205900 Sobic009G201200--Sobic010G205900 Sobic004G157400 Sobic004G157400 Sobic009G201200--Sobic004G157400 Sobic008G049100 Sobic008G049100 Sobic009G201200--Sobic008G049100 Sobic002G234300 Sobic002G234300 Sobic009G201200--Sobic002G234300 Sobic003G199300 Sobic003G199300 Sobic009G201200--Sobic003G199300 Sobic003G123200 Sobic003G123200 Sobic009G201200--Sobic003G123200 Sobic002G071400 Sobic002G071400 Sobic009G201200--Sobic002G071400 Sobic005G163700 Sobic005G163700 Sobic001G460500--Sobic005G163700 Sobic002G423500 Sobic002G423500 Sobic001G460500--Sobic002G423500 Sobic002G014400 Sobic002G014400 Sobic001G460500--Sobic002G014400 Sobic004G208500 Sobic004G208500 Sobic001G460500--Sobic004G208500 Sobic010G081700 Sobic010G081700 Sobic001G460500--Sobic010G081700 Sobic004G047200 Sobic004G047200 Sobic001G460500--Sobic004G047200 Sobic002G412700 Sobic002G412700 Sobic001G460500--Sobic002G412700 Sobic001G251600 Sobic001G251600 Sobic001G460500--Sobic001G251600 Sobic003G099300 Sobic003G099300 Sobic001G460500--Sobic003G099300 Sobic010G090500 Sobic010G090500 Sobic008G191500--Sobic010G090500 Sobic001G159800 Sobic001G159800 Sobic008G191500--Sobic001G159800 Sobic009G206500 Sobic009G206500 Sobic008G191500--Sobic009G206500 Sobic003G017500 Sobic003G017500 Sobic008G191500--Sobic003G017500 Sobic009G151700 Sobic009G151700 Sobic008G191500--Sobic009G151700 Sobic004G051300 Sobic004G051300 Sobic008G191500--Sobic004G051300 Sobic001G073150 Sobic001G073150 Sobic008G191500--Sobic001G073150 Sobic009G073400 Sobic009G073400 Sobic008G191500--Sobic009G073400 Sobic009G061000 Sobic009G061000 Sobic008G191500--Sobic009G061000 Sobic009G207200 Sobic009G207200 Sobic004G075200--Sobic009G207200 Sobic004G075200--Sobic001G469200 Sobic008G125000 Sobic008G125000 Sobic004G075200--Sobic008G125000 Sobic001G467100 Sobic001G467100 Sobic004G075200--Sobic001G467100 Sobic007G047600 Sobic007G047600 Sobic004G075200--Sobic007G047600 Sobic006G029400 Sobic006G029400 Sobic004G075200--Sobic006G029400 Sobic004G256300 Sobic004G256300 Sobic004G075200--Sobic004G256300 Sobic003G008600 Sobic003G008600 Sobic004G075200--Sobic003G008600 Sobic006G245700 Sobic006G245700 Sobic004G075200--Sobic006G245700 Sobic003G077300 Sobic003G077300 Sobic005G108801--Sobic003G077300 Sobic002G394600 Sobic002G394600 Sobic005G108801--Sobic002G394600 Sobic004G198900 Sobic004G198900 Sobic005G108801--Sobic004G198900 Sobic004G343200 Sobic004G343200 Sobic005G108801--Sobic004G343200 Sobic007G217400 Sobic007G217400 Sobic005G108801--Sobic007G217400 Sobic007G134100 Sobic007G134100 Sobic005G108801--Sobic007G134100 Sobic003G199700 Sobic003G199700 Sobic005G108801--Sobic003G199700 Sobic005G120700 Sobic005G120700 Sobic005G108801--Sobic005G120700 Sobic005G108801--Sobic006G245700 Sobic003G361400 Sobic003G361400 Sobic003G259600--Sobic003G361400 Sobic003G360300 Sobic003G360300 Sobic003G259600--Sobic003G360300 Sobic001G373000 Sobic001G373000 Sobic003G259600--Sobic001G373000 Sobic003G331000 Sobic003G331000 Sobic003G259600--Sobic003G331000 Sobic004G038100 Sobic004G038100 Sobic003G259600--Sobic004G038100 Sobic010G269300 Sobic010G269300 Sobic003G259600--Sobic010G269300 Sobic003G028400 Sobic003G028400 Sobic003G259600--Sobic003G028400 Sobic002G142700 Sobic002G142700 Sobic003G259600--Sobic002G142700 Sobic001G334100 Sobic001G334100 Sobic003G259600--Sobic001G334100 Sobic003G039500--Sobic001G460500 Sobic003G039500--Sobic003G259600 Sobic003G039500--Sobic001G373000 Sobic004G224600 Sobic004G224600 Sobic003G039500--Sobic004G224600 Sobic003G376500 Sobic003G376500 Sobic003G039500--Sobic003G376500 Sobic003G039500--Sobic010G205900 Sobic004G356200 Sobic004G356200 Sobic003G039500--Sobic004G356200 Sobic003G039500--Sobic003G360300 Sobic002G371600 Sobic002G371600 Sobic003G039500--Sobic002G371600 Sobic009G050100 Sobic009G050100 Sobic002G270100--Sobic009G050100 Sobic003G284500 Sobic003G284500 Sobic002G270100--Sobic003G284500 Sobic002G270100--Sobic010G050400 Sobic002G248001 Sobic002G248001 Sobic002G270100--Sobic002G248001 Sobic010G061100 Sobic010G061100 Sobic002G270100--Sobic010G061100 Sobic001G157500 Sobic001G157500 Sobic002G270100--Sobic001G157500 Sobic002G283800 Sobic002G283800 Sobic002G270100--Sobic002G283800 Sobic004G043200 Sobic004G043200 Sobic002G270100--Sobic004G043200 Sobic003G211500 Sobic003G211500 Sobic002G270100--Sobic003G211500
Octagon: transcription factors


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