Gene annotation
Transcriptome id Sobic.005G034600.2,Sobic.005G034600.3
Synonym Sb05g002920
Functional annotation expressed protein
UniProt A0A1Z5RGZ6
Pfam -
Panther DB PTHR36402
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G49210 : -
RAP-DB (Rice) LOC_Os11g05120.1 : expressed protein
MaizeGDB (Corn) Zm00025a013031
Brachypodium KQJ92310
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G164300 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@rotamase("PubMedID : 26759170,PubMedID : 24597475")@peptidyl-prolyl cis-trans isomerase, putative, expressed -
2 Sobic.002G219800 expressed protein -
3 Sobic.009G228300 50S ribosomal protein L21, chloroplast precursor, putative, expressed K02888: RP-L21, MRPL21, large subunit ribosomal protein L21
4 Sobic.001G072900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
5 Sobic.004G043600 expressed protein -
6 Sobic.004G172600 tetratricopeptide repeat containing protein, putative, expressed -
7 Sobic.002G332100 expressed protein -
8 Sobic.001G436100 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
9 Sobic.010G277000 exosome complex exonuclease, putative, expressed K12589: RRP42, exosome complex component RRP42
10 Sobic.010G168900 transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
11 Sobic.001G267500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat containing protein, expressed -
12 Sobic.010G050400 methyltransferase-like protein 5, putative, expressed -
13 Sobic.003G142400 pentatricopeptide, putative, expressed -
14 Sobic.001G146000 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
15 Sobic.004G249100 spotted leaf 11, putative, expressed -
16 Sobic.001G116000 dynamin family protein, putative, expressed K01528: dynamin 1/3
17 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
18 Sobic.003G054100 expressed protein -
19 Sobic.002G264900 RNA recognition motif containing protein, putative, expressed -
20 Sobic.010G018500 expressed protein -


Gene co-expression network
sample Sobic005G034600 Sobic005G034600 Sobic007G164300 Sobic007G164300 Sobic005G034600--Sobic007G164300 Sobic002G219800 Sobic002G219800 Sobic005G034600--Sobic002G219800 Sobic009G228300 Sobic009G228300 Sobic005G034600--Sobic009G228300 Sobic001G072900 Sobic001G072900 Sobic005G034600--Sobic001G072900 Sobic004G043600 Sobic004G043600 Sobic005G034600--Sobic004G043600 Sobic004G172600 Sobic004G172600 Sobic005G034600--Sobic004G172600 Sobic002G332100 Sobic002G332100 Sobic005G034600--Sobic002G332100 Sobic001G436100 Sobic001G436100 Sobic005G034600--Sobic001G436100 Sobic010G277000 Sobic010G277000 Sobic005G034600--Sobic010G277000 Sobic007G140100 Sobic007G140100 Sobic007G164300--Sobic007G140100 Sobic010G080900 Sobic010G080900 Sobic007G164300--Sobic010G080900 Sobic009G256700 Sobic009G256700 Sobic007G164300--Sobic009G256700 Sobic004G064600 Sobic004G064600 Sobic007G164300--Sobic004G064600 Sobic007G048700 Sobic007G048700 Sobic007G164300--Sobic007G048700 Sobic007G010200 Sobic007G010200 Sobic007G164300--Sobic007G010200 Sobic007G164300--Sobic005G034600 Sobic001G211500 Sobic001G211500 Sobic007G164300--Sobic001G211500 Sobic004G007700 Sobic004G007700 Sobic007G164300--Sobic004G007700 Sobic004G026100 Sobic004G026100 Sobic002G219800--Sobic004G026100 Sobic002G219800--Sobic005G034600 Sobic004G131100 Sobic004G131100 Sobic002G219800--Sobic004G131100 Sobic007G216600 Sobic007G216600 Sobic002G219800--Sobic007G216600 Sobic003G086700 Sobic003G086700 Sobic002G219800--Sobic003G086700 Sobic010G123700 Sobic010G123700 Sobic002G219800--Sobic010G123700 Sobic003G128500 Sobic003G128500 Sobic002G219800--Sobic003G128500 Sobic001G285800 Sobic001G285800 Sobic002G219800--Sobic001G285800 Sobic010G217200 Sobic010G217200 Sobic002G219800--Sobic010G217200 Sobic009G228300--Sobic001G072900 Sobic009G228300--Sobic004G172600 Sobic009G228300--Sobic005G034600 Sobic003G054100 Sobic003G054100 Sobic009G228300--Sobic003G054100 Sobic001G267500 Sobic001G267500 Sobic009G228300--Sobic001G267500 Sobic001G312700 Sobic001G312700 Sobic009G228300--Sobic001G312700 Sobic010G018900 Sobic010G018900 Sobic009G228300--Sobic010G018900 Sobic007G130000 Sobic007G130000 Sobic009G228300--Sobic007G130000 Sobic004G076850 Sobic004G076850 Sobic009G228300--Sobic004G076850 Sobic001G072900--Sobic001G267500 Sobic001G487000 Sobic001G487000 Sobic001G072900--Sobic001G487000 Sobic006G077600 Sobic006G077600 Sobic001G072900--Sobic006G077600 Sobic002G363700 Sobic002G363700 Sobic001G072900--Sobic002G363700 Sobic003G377200 Sobic003G377200 Sobic001G072900--Sobic003G377200 Sobic001G541601 Sobic001G541601 Sobic001G072900--Sobic001G541601 Sobic007G208500 Sobic007G208500 Sobic001G072900--Sobic007G208500 Sobic006G278900 Sobic006G278900 Sobic001G072900--Sobic006G278900 Sobic001G072900--Sobic009G228300 Sobic003G113400 Sobic003G113400 Sobic004G043600--Sobic003G113400 Sobic003G167000 Sobic003G167000 Sobic004G043600--Sobic003G167000 Sobic001G203600 Sobic001G203600 Sobic004G043600--Sobic001G203600 Sobic007G207600 Sobic007G207600 Sobic004G043600--Sobic007G207600 Sobic003G112600 Sobic003G112600 Sobic004G043600--Sobic003G112600 Sobic003G142400 Sobic003G142400 Sobic004G043600--Sobic003G142400 Sobic007G226800 Sobic007G226800 Sobic004G043600--Sobic007G226800 Sobic001G343000 Sobic001G343000 Sobic004G043600--Sobic001G343000 Sobic003G190600 Sobic003G190600 Sobic004G043600--Sobic003G190600 Sobic004G172600--Sobic003G054100 Sobic004G172600--Sobic009G228300 Sobic004G172600--Sobic005G034600 Sobic004G172600--Sobic001G072900 Sobic009G243900 Sobic009G243900 Sobic004G172600--Sobic009G243900 Sobic001G171500 Sobic001G171500 Sobic004G172600--Sobic001G171500 Sobic004G172600--Sobic001G487000 Sobic001G513100 Sobic001G513100 Sobic004G172600--Sobic001G513100 Sobic001G150800 Sobic001G150800 Sobic004G172600--Sobic001G150800 Sobic002G075500 Sobic002G075500 Sobic002G332100--Sobic002G075500 Sobic002G332100--Sobic001G436100 Sobic004G212100 Sobic004G212100 Sobic002G332100--Sobic004G212100 Sobic002G342500 Sobic002G342500 Sobic002G332100--Sobic002G342500 Sobic001G196100 Sobic001G196100 Sobic002G332100--Sobic001G196100 Sobic001G338400 Sobic001G338400 Sobic002G332100--Sobic001G338400 Sobic001G116000 Sobic001G116000 Sobic002G332100--Sobic001G116000 Sobic010G060600 Sobic010G060600 Sobic002G332100--Sobic010G060600 Sobic010G253300 Sobic010G253300 Sobic002G332100--Sobic010G253300 Sobic001G436100--Sobic001G116000 Sobic001G436100--Sobic001G196100 Sobic009G194200 Sobic009G194200 Sobic001G436100--Sobic009G194200 Sobic001G026600 Sobic001G026600 Sobic001G436100--Sobic001G026600 Sobic004G331900 Sobic004G331900 Sobic001G436100--Sobic004G331900 Sobic001G436100--Sobic002G075500 Sobic001G313301 Sobic001G313301 Sobic001G436100--Sobic001G313301 Sobic004G333100 Sobic004G333100 Sobic001G436100--Sobic004G333100 Sobic003G319000 Sobic003G319000 Sobic001G436100--Sobic003G319000 Sobic008G084100 Sobic008G084100 Sobic010G277000--Sobic008G084100 Sobic007G191600 Sobic007G191600 Sobic010G277000--Sobic007G191600 Sobic001G035400 Sobic001G035400 Sobic010G277000--Sobic001G035400 Sobic001G214900 Sobic001G214900 Sobic010G277000--Sobic001G214900 Sobic003G238500 Sobic003G238500 Sobic010G277000--Sobic003G238500 Sobic010G277000--Sobic001G026600 Sobic002G054000 Sobic002G054000 Sobic010G277000--Sobic002G054000 Sobic003G205400 Sobic003G205400 Sobic010G277000--Sobic003G205400 Sobic005G027300 Sobic005G027300 Sobic010G277000--Sobic005G027300
Octagon: transcription factors


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