Gene annotation
Transcriptome id Sobic.007G164300.1
Synonym ROC5, ATCYP1, Sb07g023770,
Functional annotation expressed high in CK60 (an inefficient nitrogen user) (PubMedID : 28697783)
rotamase( (PubMedID : 26759170,(PubMedID : 24597475)
peptidyl-prolyl cis-trans isomerase, putative, expressed
UniProt C5YMT4
Pfam PF00160
Panther DB PTHR11071
NCBI CDD KOG0880; Peptidyl-prolyl cis-trans isomerase
KEGG Orthology -
Gene Ontology GO:0006457; protein folding GO:0003755peptidyl-prolyl cis-trans isomerase activity GO:0000413protein peptidyl-prolyl isomerization


Orthologs (automatic annotation)
TAIR AT4G34870 : rotamase cyclophilin 5
RAP-DB (Rice) LOC_Os02g02890.1 : peptidyl-prolyl cis-trans isomerase, putative, expressed
MaizeGDB (Corn) Zm00025a020506 , Zm00025a020505
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G164300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G140100 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
2 Sobic.010G080900 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
3 Sobic.009G256700 - -
4 Sobic.004G064600 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
5 Sobic.007G048700 stomatin-like protein 2, putative, expressed -
6 Sobic.007G010200 - -
7 Sobic.005G034600 expressed protein -
8 Sobic.001G211500 LIG1 - Putative DNA ligase I, expressed K10747: DNA ligase 1
9 Sobic.004G007700 pentatricopeptide, putative, expressed -
10 Sobic.001G088200 strictosidine synthase, putative, expressed -
11 Sobic.008G004900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
12 Sobic.004G027000 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
13 Sobic.002G154800 glycosyl transferase, group 1 domain containing protein, expressed -
14 Sobic.003G045000 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
15 Sobic.006G153200 OsClp7 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
16 Sobic.007G081500 TBC domain containing protein, expressed -
17 Sobic.009G220000 threonine synthase, chloroplast precursor, putative, expressed K01733: threonine synthase
18 Sobic.002G192900 expressed protein -
19 Sobic.008G132200 tetratricopeptide repeat domain containing protein, expressed -
20 Sobic.001G361200 expressed protein -


Gene co-expression network
sample Sobic007G164300 Sobic007G164300 Sobic007G140100 Sobic007G140100 Sobic007G164300--Sobic007G140100 Sobic010G080900 Sobic010G080900 Sobic007G164300--Sobic010G080900 Sobic009G256700 Sobic009G256700 Sobic007G164300--Sobic009G256700 Sobic004G064600 Sobic004G064600 Sobic007G164300--Sobic004G064600 Sobic007G048700 Sobic007G048700 Sobic007G164300--Sobic007G048700 Sobic007G010200 Sobic007G010200 Sobic007G164300--Sobic007G010200 Sobic005G034600 Sobic005G034600 Sobic007G164300--Sobic005G034600 Sobic001G211500 Sobic001G211500 Sobic007G164300--Sobic001G211500 Sobic004G007700 Sobic004G007700 Sobic007G164300--Sobic004G007700 Sobic007G140100--Sobic010G080900 Sobic010G188900 Sobic010G188900 Sobic007G140100--Sobic010G188900 Sobic008G047500 Sobic008G047500 Sobic007G140100--Sobic008G047500 Sobic010G018900 Sobic010G018900 Sobic007G140100--Sobic010G018900 Sobic007G140100--Sobic007G010200 Sobic001G203600 Sobic001G203600 Sobic007G140100--Sobic001G203600 Sobic007G140100--Sobic004G007700 Sobic001G268300 Sobic001G268300 Sobic007G140100--Sobic001G268300 Sobic006G153200 Sobic006G153200 Sobic007G140100--Sobic006G153200 Sobic002G308000 Sobic002G308000 Sobic010G080900--Sobic002G308000 Sobic010G080900--Sobic010G188900 Sobic010G080900--Sobic007G140100 Sobic008G132200 Sobic008G132200 Sobic010G080900--Sobic008G132200 Sobic010G080900--Sobic007G048700 Sobic002G268700 Sobic002G268700 Sobic010G080900--Sobic002G268700 Sobic010G080900--Sobic004G007700 Sobic001G343000 Sobic001G343000 Sobic010G080900--Sobic001G343000 Sobic010G080900--Sobic004G064600 Sobic007G173000 Sobic007G173000 Sobic009G256700--Sobic007G173000 Sobic001G036300 Sobic001G036300 Sobic009G256700--Sobic001G036300 Sobic002G370400 Sobic002G370400 Sobic009G256700--Sobic002G370400 Sobic001G361200 Sobic001G361200 Sobic009G256700--Sobic001G361200 Sobic008G148000 Sobic008G148000 Sobic009G256700--Sobic008G148000 Sobic010G008900 Sobic010G008900 Sobic009G256700--Sobic010G008900 Sobic004G328300 Sobic004G328300 Sobic009G256700--Sobic004G328300 Sobic004G063600 Sobic004G063600 Sobic009G256700--Sobic004G063600 Sobic002G320600 Sobic002G320600 Sobic009G256700--Sobic002G320600 Sobic006G095000 Sobic006G095000 Sobic004G064600--Sobic006G095000 Sobic002G192900 Sobic002G192900 Sobic004G064600--Sobic002G192900 Sobic004G064600--Sobic008G047500 Sobic001G323400 Sobic001G323400 Sobic004G064600--Sobic001G323400 Sobic001G082800 Sobic001G082800 Sobic004G064600--Sobic001G082800 Sobic002G390800 Sobic002G390800 Sobic004G064600--Sobic002G390800 Sobic008G004900 Sobic008G004900 Sobic004G064600--Sobic008G004900 Sobic007G186400 Sobic007G186400 Sobic004G064600--Sobic007G186400 Sobic004G064600--Sobic002G308000 Sobic003G167000 Sobic003G167000 Sobic007G048700--Sobic003G167000 Sobic002G070300 Sobic002G070300 Sobic007G048700--Sobic002G070300 Sobic001G035400 Sobic001G035400 Sobic007G048700--Sobic001G035400 Sobic009G220000 Sobic009G220000 Sobic007G048700--Sobic009G220000 Sobic007G003100 Sobic007G003100 Sobic007G048700--Sobic007G003100 Sobic001G347700 Sobic001G347700 Sobic007G048700--Sobic001G347700 Sobic007G048700--Sobic008G132200 Sobic007G048700--Sobic001G343000 Sobic001G013200 Sobic001G013200 Sobic007G048700--Sobic001G013200 Sobic004G229000 Sobic004G229000 Sobic007G010200--Sobic004G229000 Sobic008G112100 Sobic008G112100 Sobic007G010200--Sobic008G112100 Sobic007G031100 Sobic007G031100 Sobic007G010200--Sobic007G031100 Sobic007G036800 Sobic007G036800 Sobic007G010200--Sobic007G036800 Sobic007G010200--Sobic007G140100 Sobic009G054400 Sobic009G054400 Sobic007G010200--Sobic009G054400 Sobic003G304800 Sobic003G304800 Sobic007G010200--Sobic003G304800 Sobic001G309200 Sobic001G309200 Sobic007G010200--Sobic001G309200 Sobic007G010200--Sobic010G018900 Sobic005G034600--Sobic007G164300 Sobic002G219800 Sobic002G219800 Sobic005G034600--Sobic002G219800 Sobic009G228300 Sobic009G228300 Sobic005G034600--Sobic009G228300 Sobic001G072900 Sobic001G072900 Sobic005G034600--Sobic001G072900 Sobic004G043600 Sobic004G043600 Sobic005G034600--Sobic004G043600 Sobic004G172600 Sobic004G172600 Sobic005G034600--Sobic004G172600 Sobic002G332100 Sobic002G332100 Sobic005G034600--Sobic002G332100 Sobic001G436100 Sobic001G436100 Sobic005G034600--Sobic001G436100 Sobic010G277000 Sobic010G277000 Sobic005G034600--Sobic010G277000 Sobic006G106200 Sobic006G106200 Sobic001G211500--Sobic006G106200 Sobic007G209600 Sobic007G209600 Sobic001G211500--Sobic007G209600 Sobic007G031300 Sobic007G031300 Sobic001G211500--Sobic007G031300 Sobic009G052100 Sobic009G052100 Sobic001G211500--Sobic009G052100 Sobic003G411700 Sobic003G411700 Sobic001G211500--Sobic003G411700 Sobic008G169400 Sobic008G169400 Sobic001G211500--Sobic008G169400 Sobic007G076200 Sobic007G076200 Sobic001G211500--Sobic007G076200 Sobic002G271400 Sobic002G271400 Sobic001G211500--Sobic002G271400 Sobic010G024000 Sobic010G024000 Sobic001G211500--Sobic010G024000 Sobic004G356300 Sobic004G356300 Sobic004G007700--Sobic004G356300 Sobic004G007700--Sobic010G018900 Sobic001G011000 Sobic001G011000 Sobic004G007700--Sobic001G011000 Sobic003G075200 Sobic003G075200 Sobic004G007700--Sobic003G075200 Sobic002G367800 Sobic002G367800 Sobic004G007700--Sobic002G367800 Sobic004G007700--Sobic010G080900 Sobic010G002800 Sobic010G002800 Sobic004G007700--Sobic010G002800 Sobic004G007700--Sobic007G140100 Sobic001G167500 Sobic001G167500 Sobic004G007700--Sobic001G167500
Octagon: transcription factors


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