Gene annotation
Transcriptome id Sobic.006G153200.1,Sobic.006G153200.2
Synonym Sb06g023070, NCLPP7, CLPP2
Functional annotation OsClp7 - Putative Clp protease homologue, expressed
UniProt A0A1B6PM68
Pfam PF00574
Panther DB PTHR10381 PTHR10381:SF21
NCBI CDD KOG0840; ATP-dependent Clp protease, proteolytic subunit
KEGG Orthology K01358; clpP, ATP-dependent Clp protease, protease subunit
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23140 : nuclear-encoded CLP protease P7
RAP-DB (Rice) LOC_Os04g44400.1 : OsClp7 - Putative Clp protease homologue, expressed
MaizeGDB (Corn) Zm00025a032079 , Zm00025a021041 , Zm00025a056540 , Zm00025a010608
Brachypodium KQK00461 , KQK00460 , KQJ83676
Barley HORVU6Hr1G059510.7 , HORVU6Hr1G059510.5 , HORVU6Hr1G059510.8 , HORVU6Hr1G059510.9 , HORVU6Hr1G059510.3 , HORVU6Hr1G059510.4 , HORVU6Hr1G059510.6 , HORVU6Hr1G059510.12 , HORVU6Hr1G059510.13 , HORVU6Hr1G059510.10 , HORVU6Hr1G059510.11 , HORVU2Hr1G090470.1 , HORVU2Hr1G090470.2 , HORVU2Hr1G090470.3
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G218000 VIP1 protein, putative, expressed -
2 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
3 Sobic.004G100100 expressed protein -
4 Sobic.003G075200 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
5 Sobic.003G167000 protein phosphotase protein, putative, expressed -
6 Sobic.009G107200 expressed protein -
7 Sobic.003G113400 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
8 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
9 Sobic.008G011800 DTW domain containing protein, putative, expressed -
10 Sobic.007G140100 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
11 Sobic.001G352800 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
12 Sobic.001G219800 methyltransferase, putative, expressed -
13 Sobic.001G188000 SAM-dependent methyltransferase, putative, expressed -
14 Sobic.008G057900 OsAPx6 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
15 Sobic.007G014700 Fructokinase-2 (Zm)(PubMedID : 27208977)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
16 Sobic.004G356300 expressed protein -
17 Sobic.001G309200 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
18 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
19 Sobic.010G188900 PPR repeat domain containing protein, putative, expressed -
20 Sobic.002G422400 adenylate cyclase family protein, expressed -


Gene co-expression network
sample Sobic006G153200 Sobic006G153200 Sobic009G218000 Sobic009G218000 Sobic006G153200--Sobic009G218000 Sobic002G217500 Sobic002G217500 Sobic006G153200--Sobic002G217500 Sobic004G100100 Sobic004G100100 Sobic006G153200--Sobic004G100100 Sobic003G075200 Sobic003G075200 Sobic006G153200--Sobic003G075200 Sobic003G167000 Sobic003G167000 Sobic006G153200--Sobic003G167000 Sobic009G107200 Sobic009G107200 Sobic006G153200--Sobic009G107200 Sobic003G113400 Sobic003G113400 Sobic006G153200--Sobic003G113400 Sobic003G260600 Sobic003G260600 Sobic006G153200--Sobic003G260600 Sobic008G011800 Sobic008G011800 Sobic006G153200--Sobic008G011800 Sobic009G218000--Sobic006G153200 Sobic001G309200 Sobic001G309200 Sobic009G218000--Sobic001G309200 Sobic009G218000--Sobic003G167000 Sobic009G218000--Sobic002G217500 Sobic002G422400 Sobic002G422400 Sobic009G218000--Sobic002G422400 Sobic001G352800 Sobic001G352800 Sobic009G218000--Sobic001G352800 Sobic001G485300 Sobic001G485300 Sobic009G218000--Sobic001G485300 Sobic001G155200 Sobic001G155200 Sobic009G218000--Sobic001G155200 Sobic009G218000--Sobic008G011800 Sobic003G016300 Sobic003G016300 Sobic002G217500--Sobic003G016300 Sobic002G352200 Sobic002G352200 Sobic002G217500--Sobic002G352200 Sobic002G255400 Sobic002G255400 Sobic002G217500--Sobic002G255400 Sobic002G217500--Sobic006G153200 Sobic001G219800 Sobic001G219800 Sobic002G217500--Sobic001G219800 Sobic008G018300 Sobic008G018300 Sobic002G217500--Sobic008G018300 Sobic002G217500--Sobic003G260600 Sobic007G023400 Sobic007G023400 Sobic002G217500--Sobic007G023400 Sobic002G217500--Sobic009G218000 Sobic004G100100--Sobic003G260600 Sobic004G100100--Sobic002G255400 Sobic003G284100 Sobic003G284100 Sobic004G100100--Sobic003G284100 Sobic007G014700 Sobic007G014700 Sobic004G100100--Sobic007G014700 Sobic001G282200 Sobic001G282200 Sobic004G100100--Sobic001G282200 Sobic004G100100--Sobic006G153200 Sobic004G100100--Sobic008G018300 Sobic003G013700 Sobic003G013700 Sobic004G100100--Sobic003G013700 Sobic004G100100--Sobic001G309200 Sobic004G356300 Sobic004G356300 Sobic003G075200--Sobic004G356300 Sobic003G075200--Sobic001G352800 Sobic008G057900 Sobic008G057900 Sobic003G075200--Sobic008G057900 Sobic010G188900 Sobic010G188900 Sobic003G075200--Sobic010G188900 Sobic009G220000 Sobic009G220000 Sobic003G075200--Sobic009G220000 Sobic002G153000 Sobic002G153000 Sobic003G075200--Sobic002G153000 Sobic002G090500 Sobic002G090500 Sobic003G075200--Sobic002G090500 Sobic004G007700 Sobic004G007700 Sobic003G075200--Sobic004G007700 Sobic003G075200--Sobic006G153200 Sobic007G048700 Sobic007G048700 Sobic003G167000--Sobic007G048700 Sobic001G347700 Sobic001G347700 Sobic003G167000--Sobic001G347700 Sobic001G013200 Sobic001G013200 Sobic003G167000--Sobic001G013200 Sobic007G003100 Sobic007G003100 Sobic003G167000--Sobic007G003100 Sobic003G167000--Sobic009G218000 Sobic003G274200 Sobic003G274200 Sobic003G167000--Sobic003G274200 Sobic003G167000--Sobic003G113400 Sobic003G190600 Sobic003G190600 Sobic003G167000--Sobic003G190600 Sobic003G167000--Sobic006G153200 Sobic009G107200--Sobic006G153200 Sobic004G017900 Sobic004G017900 Sobic009G107200--Sobic004G017900 Sobic009G107200--Sobic007G014700 Sobic009G107200--Sobic003G167000 Sobic001G188000 Sobic001G188000 Sobic009G107200--Sobic001G188000 Sobic009G107200--Sobic004G100100 Sobic009G107200--Sobic001G219800 Sobic009G107200--Sobic009G218000 Sobic009G107200--Sobic008G011800 Sobic003G113400--Sobic003G167000 Sobic009G041800 Sobic009G041800 Sobic003G113400--Sobic009G041800 Sobic004G334200 Sobic004G334200 Sobic003G113400--Sobic004G334200 Sobic007G191600 Sobic007G191600 Sobic003G113400--Sobic007G191600 Sobic001G203600 Sobic001G203600 Sobic003G113400--Sobic001G203600 Sobic004G043600 Sobic004G043600 Sobic003G113400--Sobic004G043600 Sobic002G402500 Sobic002G402500 Sobic003G113400--Sobic002G402500 Sobic010G250000 Sobic010G250000 Sobic003G113400--Sobic010G250000 Sobic001G052100 Sobic001G052100 Sobic003G113400--Sobic001G052100 Sobic003G260600--Sobic002G255400 Sobic003G201500 Sobic003G201500 Sobic003G260600--Sobic003G201500 Sobic003G089100 Sobic003G089100 Sobic003G260600--Sobic003G089100 Sobic008G132200 Sobic008G132200 Sobic003G260600--Sobic008G132200 Sobic001G378800 Sobic001G378800 Sobic003G260600--Sobic001G378800 Sobic003G372200 Sobic003G372200 Sobic003G260600--Sobic003G372200 Sobic002G420600 Sobic002G420600 Sobic003G260600--Sobic002G420600 Sobic008G072500 Sobic008G072500 Sobic003G260600--Sobic008G072500 Sobic003G260600--Sobic007G014700 Sobic002G420100 Sobic002G420100 Sobic008G011800--Sobic002G420100 Sobic010G253200 Sobic010G253200 Sobic008G011800--Sobic010G253200 Sobic008G011800--Sobic003G260600 Sobic002G414800 Sobic002G414800 Sobic008G011800--Sobic002G414800 Sobic008G011800--Sobic004G017900 Sobic008G011800--Sobic001G188000 Sobic008G011800--Sobic010G188900 Sobic008G011800--Sobic001G309200 Sobic002G392400 Sobic002G392400 Sobic008G011800--Sobic002G392400
Octagon: transcription factors


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