Gene annotation
Transcriptome id Sobic.009G107200.1
Synonym Sb09g017240
Functional annotation expressed protein
UniProt C5YWP3
Pfam PF12023
Panther DB PTHR33193 PTHR33193:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G47480 : Protein of unknown function (DUF3511)
RAP-DB (Rice) LOC_Os05g28840.1 : expressed protein
MaizeGDB (Corn) Zm00025a043407 , Zm00025a002095
Brachypodium KQK22043 , KQK22042
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G107200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G153200 OsClp7 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
2 Sobic.004G017900 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
3 Sobic.007G014700 Fructokinase-2 (Zm)(PubMedID : 27208977)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
4 Sobic.003G167000 protein phosphotase protein, putative, expressed -
5 Sobic.001G188000 SAM-dependent methyltransferase, putative, expressed -
6 Sobic.004G100100 expressed protein -
7 Sobic.001G219800 methyltransferase, putative, expressed -
8 Sobic.009G218000 VIP1 protein, putative, expressed -
9 Sobic.008G011800 DTW domain containing protein, putative, expressed -
10 Sobic.002G414800 PPR repeat domain containing protein, putative, expressed -
11 Sobic.002G054700 indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K01695: tryptophan synthase alpha chain
12 Sobic.001G309200 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
13 Sobic.002G124900 expressed protein K02138: ATPeF0D, ATP5H, F-type H+-transporting ATPase subunit d
14 Sobic.010G188900 PPR repeat domain containing protein, putative, expressed -
15 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
16 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
17 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
18 Sobic.003G284100 expressed protein -
19 Sobic.003G200000 respiratory burst oxidase, putative, expressed -
20 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit


Gene co-expression network
sample Sobic009G107200 Sobic009G107200 Sobic006G153200 Sobic006G153200 Sobic009G107200--Sobic006G153200 Sobic004G017900 Sobic004G017900 Sobic009G107200--Sobic004G017900 Sobic007G014700 Sobic007G014700 Sobic009G107200--Sobic007G014700 Sobic003G167000 Sobic003G167000 Sobic009G107200--Sobic003G167000 Sobic001G188000 Sobic001G188000 Sobic009G107200--Sobic001G188000 Sobic004G100100 Sobic004G100100 Sobic009G107200--Sobic004G100100 Sobic001G219800 Sobic001G219800 Sobic009G107200--Sobic001G219800 Sobic009G218000 Sobic009G218000 Sobic009G107200--Sobic009G218000 Sobic008G011800 Sobic008G011800 Sobic009G107200--Sobic008G011800 Sobic006G153200--Sobic009G218000 Sobic002G217500 Sobic002G217500 Sobic006G153200--Sobic002G217500 Sobic006G153200--Sobic004G100100 Sobic003G075200 Sobic003G075200 Sobic006G153200--Sobic003G075200 Sobic006G153200--Sobic003G167000 Sobic006G153200--Sobic009G107200 Sobic003G113400 Sobic003G113400 Sobic006G153200--Sobic003G113400 Sobic003G260600 Sobic003G260600 Sobic006G153200--Sobic003G260600 Sobic006G153200--Sobic008G011800 Sobic004G017900--Sobic003G260600 Sobic001G543400 Sobic001G543400 Sobic004G017900--Sobic001G543400 Sobic002G392400 Sobic002G392400 Sobic004G017900--Sobic002G392400 Sobic007G189100 Sobic007G189100 Sobic004G017900--Sobic007G189100 Sobic008G132200 Sobic008G132200 Sobic004G017900--Sobic008G132200 Sobic004G017900--Sobic007G014700 Sobic003G200000 Sobic003G200000 Sobic004G017900--Sobic003G200000 Sobic002G070300 Sobic002G070300 Sobic004G017900--Sobic002G070300 Sobic007G043700 Sobic007G043700 Sobic004G017900--Sobic007G043700 Sobic004G261800 Sobic004G261800 Sobic007G014700--Sobic004G261800 Sobic002G255400 Sobic002G255400 Sobic007G014700--Sobic002G255400 Sobic003G089100 Sobic003G089100 Sobic007G014700--Sobic003G089100 Sobic003G013700 Sobic003G013700 Sobic007G014700--Sobic003G013700 Sobic007G014700--Sobic003G260600 Sobic002G420600 Sobic002G420600 Sobic007G014700--Sobic002G420600 Sobic003G284100 Sobic003G284100 Sobic007G014700--Sobic003G284100 Sobic002G352200 Sobic002G352200 Sobic007G014700--Sobic002G352200 Sobic001G303900 Sobic001G303900 Sobic007G014700--Sobic001G303900 Sobic007G048700 Sobic007G048700 Sobic003G167000--Sobic007G048700 Sobic001G347700 Sobic001G347700 Sobic003G167000--Sobic001G347700 Sobic001G013200 Sobic001G013200 Sobic003G167000--Sobic001G013200 Sobic007G003100 Sobic007G003100 Sobic003G167000--Sobic007G003100 Sobic003G167000--Sobic009G218000 Sobic003G274200 Sobic003G274200 Sobic003G167000--Sobic003G274200 Sobic003G167000--Sobic003G113400 Sobic003G190600 Sobic003G190600 Sobic003G167000--Sobic003G190600 Sobic003G167000--Sobic006G153200 Sobic010G069500 Sobic010G069500 Sobic001G188000--Sobic010G069500 Sobic002G414800 Sobic002G414800 Sobic001G188000--Sobic002G414800 Sobic004G328100 Sobic004G328100 Sobic001G188000--Sobic004G328100 Sobic002G348400 Sobic002G348400 Sobic001G188000--Sobic002G348400 Sobic001G280500 Sobic001G280500 Sobic001G188000--Sobic001G280500 Sobic001G309200 Sobic001G309200 Sobic001G188000--Sobic001G309200 Sobic002G397900 Sobic002G397900 Sobic001G188000--Sobic002G397900 Sobic001G131900 Sobic001G131900 Sobic001G188000--Sobic001G131900 Sobic002G304500 Sobic002G304500 Sobic001G188000--Sobic002G304500 Sobic004G100100--Sobic003G260600 Sobic004G100100--Sobic002G255400 Sobic004G100100--Sobic003G284100 Sobic004G100100--Sobic007G014700 Sobic001G282200 Sobic001G282200 Sobic004G100100--Sobic001G282200 Sobic004G100100--Sobic006G153200 Sobic008G018300 Sobic008G018300 Sobic004G100100--Sobic008G018300 Sobic004G100100--Sobic003G013700 Sobic004G100100--Sobic001G309200 Sobic001G352800 Sobic001G352800 Sobic001G219800--Sobic001G352800 Sobic001G192700 Sobic001G192700 Sobic001G219800--Sobic001G192700 Sobic003G016300 Sobic003G016300 Sobic001G219800--Sobic003G016300 Sobic001G219800--Sobic002G255400 Sobic001G219800--Sobic002G217500 Sobic003G074900 Sobic003G074900 Sobic001G219800--Sobic003G074900 Sobic001G219800--Sobic002G420600 Sobic001G219800--Sobic002G352200 Sobic001G219800--Sobic003G075200 Sobic009G218000--Sobic006G153200 Sobic009G218000--Sobic001G309200 Sobic009G218000--Sobic003G167000 Sobic009G218000--Sobic002G217500 Sobic002G422400 Sobic002G422400 Sobic009G218000--Sobic002G422400 Sobic009G218000--Sobic001G352800 Sobic001G485300 Sobic001G485300 Sobic009G218000--Sobic001G485300 Sobic001G155200 Sobic001G155200 Sobic009G218000--Sobic001G155200 Sobic009G218000--Sobic008G011800 Sobic002G420100 Sobic002G420100 Sobic008G011800--Sobic002G420100 Sobic010G253200 Sobic010G253200 Sobic008G011800--Sobic010G253200 Sobic008G011800--Sobic003G260600 Sobic008G011800--Sobic002G414800 Sobic008G011800--Sobic004G017900 Sobic008G011800--Sobic001G188000 Sobic010G188900 Sobic010G188900 Sobic008G011800--Sobic010G188900 Sobic008G011800--Sobic001G309200 Sobic008G011800--Sobic002G392400
Octagon: transcription factors


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