Gene annotation
Transcriptome id Sobic.007G081500.1
Synonym Sb07g006550
Functional annotation TBC domain containing protein, expressed
UniProt C5YJ06
Pfam PF00566
Panther DB PTHR22957 PTHR22957:SF327
NCBI CDD KOG2058; Ypt/Rab GTPase activating protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07890 : Ypt/Rab-GAP domain of gyp1p superfamily protein
RAP-DB (Rice) LOC_Os08g25010.1 : TBC domain containing protein, expressed
MaizeGDB (Corn) Zm00025a030661
Brachypodium PNT67197 , KQJ96324
Barley HORVU1Hr1G003170.2 , HORVU1Hr1G003170.3 , HORVU1Hr1G003170.1
Wheat TraesCS1A02G023800 , TraesCS1D02G023400 , TraesCS1A02G023800 , TraesCS1B02G030000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G048700 stomatin-like protein 2, putative, expressed -
2 Sobic.008G132200 tetratricopeptide repeat domain containing protein, expressed -
3 Sobic.004G017900 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
4 Sobic.002G154800 glycosyl transferase, group 1 domain containing protein, expressed -
5 Sobic.002G192900 expressed protein -
6 Sobic.003G167000 protein phosphotase protein, putative, expressed -
7 Sobic.002G070300 expressed protein -
8 Sobic.001G543400 phosphoglycerate mutase, putative, expressed -
9 Sobic.001G347700 protein phosphotase protein, putative, expressed -
10 Sobic.001G343000 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
11 Sobic.003G075200 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
12 Sobic.009G220000 threonine synthase, chloroplast precursor, putative, expressed K01733: threonine synthase
13 Sobic.010G188900 PPR repeat domain containing protein, putative, expressed -
14 Sobic.006G153200 OsClp7 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
15 Sobic.001G352800 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
16 Sobic.002G153000 oxidoreductase domain protein, putative, expressed -
17 Sobic.006G167100 - -
18 Sobic.002G398500 Mo25, putative, expressed K08272: CAB39, calcium binding protein 39
19 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
20 Sobic.001G143900 expressed protein -


Gene co-expression network
sample Sobic007G081500 Sobic007G081500 Sobic007G048700 Sobic007G048700 Sobic007G081500--Sobic007G048700 Sobic008G132200 Sobic008G132200 Sobic007G081500--Sobic008G132200 Sobic004G017900 Sobic004G017900 Sobic007G081500--Sobic004G017900 Sobic002G154800 Sobic002G154800 Sobic007G081500--Sobic002G154800 Sobic002G192900 Sobic002G192900 Sobic007G081500--Sobic002G192900 Sobic003G167000 Sobic003G167000 Sobic007G081500--Sobic003G167000 Sobic002G070300 Sobic002G070300 Sobic007G081500--Sobic002G070300 Sobic001G543400 Sobic001G543400 Sobic007G081500--Sobic001G543400 Sobic001G347700 Sobic001G347700 Sobic007G081500--Sobic001G347700 Sobic007G048700--Sobic003G167000 Sobic007G048700--Sobic002G070300 Sobic001G035400 Sobic001G035400 Sobic007G048700--Sobic001G035400 Sobic009G220000 Sobic009G220000 Sobic007G048700--Sobic009G220000 Sobic007G003100 Sobic007G003100 Sobic007G048700--Sobic007G003100 Sobic007G048700--Sobic001G347700 Sobic007G048700--Sobic008G132200 Sobic001G343000 Sobic001G343000 Sobic007G048700--Sobic001G343000 Sobic001G013200 Sobic001G013200 Sobic007G048700--Sobic001G013200 Sobic008G132200--Sobic002G070300 Sobic003G260600 Sobic003G260600 Sobic008G132200--Sobic003G260600 Sobic002G255400 Sobic002G255400 Sobic008G132200--Sobic002G255400 Sobic003G372200 Sobic003G372200 Sobic008G132200--Sobic003G372200 Sobic001G385000 Sobic001G385000 Sobic008G132200--Sobic001G385000 Sobic002G167100 Sobic002G167100 Sobic008G132200--Sobic002G167100 Sobic001G378800 Sobic001G378800 Sobic008G132200--Sobic001G378800 Sobic006G232800 Sobic006G232800 Sobic008G132200--Sobic006G232800 Sobic010G253200 Sobic010G253200 Sobic008G132200--Sobic010G253200 Sobic004G017900--Sobic003G260600 Sobic004G017900--Sobic001G543400 Sobic002G392400 Sobic002G392400 Sobic004G017900--Sobic002G392400 Sobic007G189100 Sobic007G189100 Sobic004G017900--Sobic007G189100 Sobic004G017900--Sobic008G132200 Sobic007G014700 Sobic007G014700 Sobic004G017900--Sobic007G014700 Sobic003G200000 Sobic003G200000 Sobic004G017900--Sobic003G200000 Sobic004G017900--Sobic002G070300 Sobic007G043700 Sobic007G043700 Sobic004G017900--Sobic007G043700 Sobic002G154800--Sobic002G070300 Sobic001G486900 Sobic001G486900 Sobic002G154800--Sobic001G486900 Sobic002G154800--Sobic008G132200 Sobic007G118500 Sobic007G118500 Sobic002G154800--Sobic007G118500 Sobic002G154800--Sobic001G543400 Sobic002G154800--Sobic004G017900 Sobic002G154800--Sobic003G260600 Sobic008G011800 Sobic008G011800 Sobic002G154800--Sobic008G011800 Sobic003G184300 Sobic003G184300 Sobic002G154800--Sobic003G184300 Sobic002G308000 Sobic002G308000 Sobic002G192900--Sobic002G308000 Sobic010G188900 Sobic010G188900 Sobic002G192900--Sobic010G188900 Sobic006G095000 Sobic006G095000 Sobic002G192900--Sobic006G095000 Sobic001G361200 Sobic001G361200 Sobic002G192900--Sobic001G361200 Sobic002G390800 Sobic002G390800 Sobic002G192900--Sobic002G390800 Sobic002G192900--Sobic003G184300 Sobic004G064600 Sobic004G064600 Sobic002G192900--Sobic004G064600 Sobic001G323400 Sobic001G323400 Sobic002G192900--Sobic001G323400 Sobic001G248400 Sobic001G248400 Sobic002G192900--Sobic001G248400 Sobic003G167000--Sobic007G048700 Sobic003G167000--Sobic001G347700 Sobic003G167000--Sobic001G013200 Sobic003G167000--Sobic007G003100 Sobic009G218000 Sobic009G218000 Sobic003G167000--Sobic009G218000 Sobic003G274200 Sobic003G274200 Sobic003G167000--Sobic003G274200 Sobic003G113400 Sobic003G113400 Sobic003G167000--Sobic003G113400 Sobic003G190600 Sobic003G190600 Sobic003G167000--Sobic003G190600 Sobic006G153200 Sobic006G153200 Sobic003G167000--Sobic006G153200 Sobic002G070300--Sobic008G132200 Sobic002G070300--Sobic007G118500 Sobic002G070300--Sobic001G543400 Sobic002G070300--Sobic003G260600 Sobic001G011000 Sobic001G011000 Sobic002G070300--Sobic001G011000 Sobic003G159700 Sobic003G159700 Sobic002G070300--Sobic003G159700 Sobic002G070300--Sobic002G154800 Sobic002G070300--Sobic001G378800 Sobic002G153000 Sobic002G153000 Sobic002G070300--Sobic002G153000 Sobic001G543400--Sobic002G153000 Sobic001G543400--Sobic002G070300 Sobic008G057900 Sobic008G057900 Sobic001G543400--Sobic008G057900 Sobic001G543400--Sobic003G260600 Sobic001G543400--Sobic004G017900 Sobic001G543400--Sobic007G014700 Sobic004G218600 Sobic004G218600 Sobic001G543400--Sobic004G218600 Sobic004G261800 Sobic004G261800 Sobic001G543400--Sobic004G261800 Sobic001G543400--Sobic008G132200 Sobic001G347700--Sobic007G048700 Sobic001G347700--Sobic003G167000 Sobic001G352800 Sobic001G352800 Sobic001G347700--Sobic001G352800 Sobic001G485300 Sobic001G485300 Sobic001G347700--Sobic001G485300 Sobic001G347700--Sobic003G260600 Sobic010G028400 Sobic010G028400 Sobic001G347700--Sobic010G028400 Sobic002G352200 Sobic002G352200 Sobic001G347700--Sobic002G352200 Sobic002G217500 Sobic002G217500 Sobic001G347700--Sobic002G217500 Sobic004G040700 Sobic004G040700 Sobic001G347700--Sobic004G040700
Octagon: transcription factors


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