Gene annotation
Transcriptome id Sobic.001G088200.1
Synonym Sb01g007960
Functional annotation strictosidine synthase, putative, expressed
UniProt C5X0B5
Pfam PF08450
Panther DB PTHR10426 PTHR10426:SF24
NCBI CDD KOG1520; Predicted alkaloid synthase/Surface mucin Hemomucin
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22020 : Calcium-dependent phosphotriesterase superfamily protein
RAP-DB (Rice) LOC_Os03g53950.1 : strictosidine synthase, putative, expressed
MaizeGDB (Corn) Zm00025a008171
Brachypodium KQK13185
Barley HORVU5Hr1G095260.5 , HORVU5Hr1G095260.4 , HORVU5Hr1G095260.1 , HORVU4Hr1G016850.2 , HORVU4Hr1G016850.1 , HORVU5Hr1G114800.4 , HORVU5Hr1G114800.1 , HORVU7Hr1G019170.1 , HORVU5Hr1G114800.2 , HORVU5Hr1G114720.1 , HORVU5Hr1G114720.2 , HORVU5Hr1G095260.7 , HORVU5Hr1G095260.6 , HORVU5Hr1G114800.3
Wheat TraesCS5B02G395100 , TraesCS5A02G390200 , TraesCS5D02G400000
Populus -


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cDNA sequences
Sobic.001G088200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G129201 - -
2 Sobic.003G004100 expressed protein -
3 Sobic.001G522000 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
4 Sobic.004G184000 SFT2, putative, expressed -
5 Sobic.003G045000 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
6 Sobic.004G007700 pentatricopeptide, putative, expressed -
7 Sobic.001G518600 fatty acid hydroxylase, putative, expressed K14424: plant 4alpha-monomethylsterol monooxygenase
8 Sobic.010G055400 OsWAK63 - OsWAK receptor-like protein kinase, expressed -
9 Sobic.007G140100 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
10 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
11 Sobic.006G153200 OsClp7 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
12 Sobic.007G010200 - -
13 Sobic.002G138300 expressed protein -
14 Sobic.001G309200 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
15 Sobic.010G080900 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
16 Sobic.006G237200 vacuolar ATP synthase subunit D 1, putative, expressed K02149: ATPeV1D, V-type H+-transporting ATPase subunit D
17 Sobic.007G173000 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
18 Sobic.003G202100 Uncharacterized ACR, COG1565 containing protein, putative, expressed K18164: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
19 Sobic.001G497000 RNA helicase SDE3, putative, expressed K18422: helicase MOV-10
20 Sobic.004G017900 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1


Gene co-expression network
sample Sobic001G088200 Sobic001G088200 Sobic005G129201 Sobic005G129201 Sobic001G088200--Sobic005G129201 Sobic003G004100 Sobic003G004100 Sobic001G088200--Sobic003G004100 Sobic001G522000 Sobic001G522000 Sobic001G088200--Sobic001G522000 Sobic004G184000 Sobic004G184000 Sobic001G088200--Sobic004G184000 Sobic003G045000 Sobic003G045000 Sobic001G088200--Sobic003G045000 Sobic004G007700 Sobic004G007700 Sobic001G088200--Sobic004G007700 Sobic001G518600 Sobic001G518600 Sobic001G088200--Sobic001G518600 Sobic010G055400 Sobic010G055400 Sobic001G088200--Sobic010G055400 Sobic007G140100 Sobic007G140100 Sobic001G088200--Sobic007G140100 Sobic005G129201--Sobic004G184000 Sobic007G173000 Sobic007G173000 Sobic005G129201--Sobic007G173000 Sobic002G367800 Sobic002G367800 Sobic005G129201--Sobic002G367800 Sobic005G129201--Sobic003G004100 Sobic001G533100 Sobic001G533100 Sobic005G129201--Sobic001G533100 Sobic001G116000 Sobic001G116000 Sobic005G129201--Sobic001G116000 Sobic005G129201--Sobic001G088200 Sobic005G129201--Sobic004G007700 Sobic004G034300 Sobic004G034300 Sobic005G129201--Sobic004G034300 Sobic003G004100--Sobic005G129201 Sobic007G118500 Sobic007G118500 Sobic003G004100--Sobic007G118500 Sobic004G151200 Sobic004G151200 Sobic003G004100--Sobic004G151200 Sobic002G422400 Sobic002G422400 Sobic003G004100--Sobic002G422400 Sobic002G186300 Sobic002G186300 Sobic003G004100--Sobic002G186300 Sobic006G237200 Sobic006G237200 Sobic003G004100--Sobic006G237200 Sobic003G004100--Sobic002G367800 Sobic003G004100--Sobic004G007700 Sobic007G048700 Sobic007G048700 Sobic003G004100--Sobic007G048700 Sobic001G522000--Sobic002G367800 Sobic002G423500 Sobic002G423500 Sobic001G522000--Sobic002G423500 Sobic001G490500 Sobic001G490500 Sobic001G522000--Sobic001G490500 Sobic006G041100 Sobic006G041100 Sobic001G522000--Sobic006G041100 Sobic003G388900 Sobic003G388900 Sobic001G522000--Sobic003G388900 Sobic003G205400 Sobic003G205400 Sobic001G522000--Sobic003G205400 Sobic002G402500 Sobic002G402500 Sobic001G522000--Sobic002G402500 Sobic006G265600 Sobic006G265600 Sobic001G522000--Sobic006G265600 Sobic001G117800 Sobic001G117800 Sobic001G522000--Sobic001G117800 Sobic007G165300 Sobic007G165300 Sobic004G184000--Sobic007G165300 Sobic004G184000--Sobic005G129201 Sobic003G326900 Sobic003G326900 Sobic004G184000--Sobic003G326900 Sobic010G258000 Sobic010G258000 Sobic004G184000--Sobic010G258000 Sobic001G451901 Sobic001G451901 Sobic004G184000--Sobic001G451901 Sobic003G348200 Sobic003G348200 Sobic004G184000--Sobic003G348200 Sobic007G217400 Sobic007G217400 Sobic004G184000--Sobic007G217400 Sobic001G110300 Sobic001G110300 Sobic004G184000--Sobic001G110300 Sobic004G184000--Sobic001G116000 Sobic008G085950 Sobic008G085950 Sobic003G045000--Sobic008G085950 Sobic008G047500 Sobic008G047500 Sobic003G045000--Sobic008G047500 Sobic010G188900 Sobic010G188900 Sobic003G045000--Sobic010G188900 Sobic002G308000 Sobic002G308000 Sobic003G045000--Sobic002G308000 Sobic007G043700 Sobic007G043700 Sobic003G045000--Sobic007G043700 Sobic003G194800 Sobic003G194800 Sobic003G045000--Sobic003G194800 Sobic007G105700 Sobic007G105700 Sobic003G045000--Sobic007G105700 Sobic002G390800 Sobic002G390800 Sobic003G045000--Sobic002G390800 Sobic009G120400 Sobic009G120400 Sobic003G045000--Sobic009G120400 Sobic004G356300 Sobic004G356300 Sobic004G007700--Sobic004G356300 Sobic010G018900 Sobic010G018900 Sobic004G007700--Sobic010G018900 Sobic001G011000 Sobic001G011000 Sobic004G007700--Sobic001G011000 Sobic003G075200 Sobic003G075200 Sobic004G007700--Sobic003G075200 Sobic004G007700--Sobic002G367800 Sobic010G080900 Sobic010G080900 Sobic004G007700--Sobic010G080900 Sobic010G002800 Sobic010G002800 Sobic004G007700--Sobic010G002800 Sobic004G007700--Sobic007G140100 Sobic001G167500 Sobic001G167500 Sobic004G007700--Sobic001G167500 Sobic001G413100 Sobic001G413100 Sobic001G518600--Sobic001G413100 Sobic004G069400 Sobic004G069400 Sobic001G518600--Sobic004G069400 Sobic001G309200 Sobic001G309200 Sobic001G518600--Sobic001G309200 Sobic003G388700 Sobic003G388700 Sobic001G518600--Sobic003G388700 Sobic001G518600--Sobic005G129201 Sobic001G518600--Sobic001G167500 Sobic008G072500 Sobic008G072500 Sobic001G518600--Sobic008G072500 Sobic002G232400 Sobic002G232400 Sobic001G518600--Sobic002G232400 Sobic008G084100 Sobic008G084100 Sobic001G518600--Sobic008G084100 Sobic001G231200 Sobic001G231200 Sobic010G055400--Sobic001G231200 Sobic001G074100 Sobic001G074100 Sobic010G055400--Sobic001G074100 Sobic005G015300 Sobic005G015300 Sobic010G055400--Sobic005G015300 Sobic001G140700 Sobic001G140700 Sobic010G055400--Sobic001G140700 Sobic003G291000 Sobic003G291000 Sobic010G055400--Sobic003G291000 Sobic009G188900 Sobic009G188900 Sobic010G055400--Sobic009G188900 Sobic002G001100 Sobic002G001100 Sobic010G055400--Sobic002G001100 Sobic010G055400--Sobic007G173000 Sobic001G296800 Sobic001G296800 Sobic010G055400--Sobic001G296800 Sobic007G140100--Sobic010G080900 Sobic007G140100--Sobic010G188900 Sobic007G140100--Sobic008G047500 Sobic007G140100--Sobic010G018900 Sobic007G010200 Sobic007G010200 Sobic007G140100--Sobic007G010200 Sobic001G203600 Sobic001G203600 Sobic007G140100--Sobic001G203600 Sobic007G140100--Sobic004G007700 Sobic001G268300 Sobic001G268300 Sobic007G140100--Sobic001G268300 Sobic006G153200 Sobic006G153200 Sobic007G140100--Sobic006G153200
Octagon: transcription factors


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