Gene annotation
Transcriptome id Sobic.004G043600.2
Synonym Sb04g003740
Functional annotation expressed protein
UniProt C5XUR1
Pfam PF10173
Panther DB PTHR28062 PTHR28062:SF1
NCBI CDD KOG4539; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G53760 : -
RAP-DB (Rice) LOC_Os02g05870.1 : expressed protein
MaizeGDB (Corn) Zm00025a034877
Brachypodium KQJ93374
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G113400 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
2 Sobic.003G167000 protein phosphotase protein, putative, expressed -
3 Sobic.001G203600 PPR repeat domain containing protein, putative, expressed -
4 Sobic.007G207600 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed K00021: hydroxymethylglutaryl-CoA reductase (NADPH)
5 Sobic.003G112600 endoplasmic oxidoreductin-1 precursor, putative, expressed K10950: ERO1-like protein alpha
6 Sobic.003G142400 pentatricopeptide, putative, expressed -
7 Sobic.007G226800 -(PubMedID : 26976818)@dicarboxylate transporter 5(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
8 Sobic.001G343000 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
9 Sobic.003G190600 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
10 Sobic.004G060300 DNA binding protein, putative, expressed -
11 Sobic.003G402900 HYS1, putative, expressed -
12 Sobic.001G052100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide domain containing protein, putative, expressed -
13 Sobic.002G070300 expressed protein -
14 Sobic.007G118500 galactosyltransferase family protein, putative, expressed -
15 Sobic.001G204700 expressed protein -
16 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
17 Sobic.001G385000 nucleoside-triphosphatase, putative, expressed K14641: apyrase
18 Sobic.007G204000 methyl-binding domain protein MBD, putative, expressed -
19 Sobic.004G282500 PPR repeat domain containing protein, putative, expressed -
20 Sobic.006G222500 expressed protein -


Gene co-expression network
sample Sobic004G043600 Sobic004G043600 Sobic003G113400 Sobic003G113400 Sobic004G043600--Sobic003G113400 Sobic003G167000 Sobic003G167000 Sobic004G043600--Sobic003G167000 Sobic001G203600 Sobic001G203600 Sobic004G043600--Sobic001G203600 Sobic007G207600 Sobic007G207600 Sobic004G043600--Sobic007G207600 Sobic003G112600 Sobic003G112600 Sobic004G043600--Sobic003G112600 Sobic003G142400 Sobic003G142400 Sobic004G043600--Sobic003G142400 Sobic007G226800 Sobic007G226800 Sobic004G043600--Sobic007G226800 Sobic001G343000 Sobic001G343000 Sobic004G043600--Sobic001G343000 Sobic003G190600 Sobic003G190600 Sobic004G043600--Sobic003G190600 Sobic003G113400--Sobic003G167000 Sobic009G041800 Sobic009G041800 Sobic003G113400--Sobic009G041800 Sobic004G334200 Sobic004G334200 Sobic003G113400--Sobic004G334200 Sobic007G191600 Sobic007G191600 Sobic003G113400--Sobic007G191600 Sobic003G113400--Sobic001G203600 Sobic003G113400--Sobic004G043600 Sobic002G402500 Sobic002G402500 Sobic003G113400--Sobic002G402500 Sobic010G250000 Sobic010G250000 Sobic003G113400--Sobic010G250000 Sobic001G052100 Sobic001G052100 Sobic003G113400--Sobic001G052100 Sobic007G048700 Sobic007G048700 Sobic003G167000--Sobic007G048700 Sobic001G347700 Sobic001G347700 Sobic003G167000--Sobic001G347700 Sobic001G013200 Sobic001G013200 Sobic003G167000--Sobic001G013200 Sobic007G003100 Sobic007G003100 Sobic003G167000--Sobic007G003100 Sobic009G218000 Sobic009G218000 Sobic003G167000--Sobic009G218000 Sobic003G274200 Sobic003G274200 Sobic003G167000--Sobic003G274200 Sobic003G167000--Sobic003G113400 Sobic003G167000--Sobic003G190600 Sobic006G153200 Sobic006G153200 Sobic003G167000--Sobic006G153200 Sobic010G086300 Sobic010G086300 Sobic001G203600--Sobic010G086300 Sobic001G117900 Sobic001G117900 Sobic001G203600--Sobic001G117900 Sobic007G204000 Sobic007G204000 Sobic001G203600--Sobic007G204000 Sobic001G203600--Sobic001G052100 Sobic008G072500 Sobic008G072500 Sobic001G203600--Sobic008G072500 Sobic001G203600--Sobic007G226800 Sobic002G182000 Sobic002G182000 Sobic001G203600--Sobic002G182000 Sobic006G220400 Sobic006G220400 Sobic001G203600--Sobic006G220400 Sobic009G063800 Sobic009G063800 Sobic001G203600--Sobic009G063800 Sobic007G207600--Sobic004G043600 Sobic007G207600--Sobic003G112600 Sobic003G402900 Sobic003G402900 Sobic007G207600--Sobic003G402900 Sobic003G392550 Sobic003G392550 Sobic007G207600--Sobic003G392550 Sobic001G335000 Sobic001G335000 Sobic007G207600--Sobic001G335000 Sobic001G012900 Sobic001G012900 Sobic007G207600--Sobic001G012900 Sobic004G060300 Sobic004G060300 Sobic007G207600--Sobic004G060300 Sobic001G193100 Sobic001G193100 Sobic007G207600--Sobic001G193100 Sobic003G043800 Sobic003G043800 Sobic007G207600--Sobic003G043800 Sobic003G112600--Sobic004G043600 Sobic003G112600--Sobic007G207600 Sobic003G112600--Sobic003G142400 Sobic003G435400 Sobic003G435400 Sobic003G112600--Sobic003G435400 Sobic008G058200 Sobic008G058200 Sobic003G112600--Sobic008G058200 Sobic003G112600--Sobic003G392550 Sobic004G185500 Sobic004G185500 Sobic003G112600--Sobic004G185500 Sobic001G023600 Sobic001G023600 Sobic003G112600--Sobic001G023600 Sobic001G414100 Sobic001G414100 Sobic003G112600--Sobic001G414100 Sobic001G268300 Sobic001G268300 Sobic003G142400--Sobic001G268300 Sobic006G262800 Sobic006G262800 Sobic003G142400--Sobic006G262800 Sobic010G068900 Sobic010G068900 Sobic003G142400--Sobic010G068900 Sobic001G478900 Sobic001G478900 Sobic003G142400--Sobic001G478900 Sobic003G184300 Sobic003G184300 Sobic003G142400--Sobic003G184300 Sobic008G163400 Sobic008G163400 Sobic003G142400--Sobic008G163400 Sobic004G241000 Sobic004G241000 Sobic003G142400--Sobic004G241000 Sobic008G179000 Sobic008G179000 Sobic003G142400--Sobic008G179000 Sobic003G142400--Sobic009G041800 Sobic007G226800--Sobic001G203600 Sobic007G226800--Sobic010G086300 Sobic007G226800--Sobic008G072500 Sobic009G025700 Sobic009G025700 Sobic007G226800--Sobic009G025700 Sobic004G025700 Sobic004G025700 Sobic007G226800--Sobic004G025700 Sobic003G049200 Sobic003G049200 Sobic007G226800--Sobic003G049200 Sobic001G011000 Sobic001G011000 Sobic007G226800--Sobic001G011000 Sobic010G133400 Sobic010G133400 Sobic007G226800--Sobic010G133400 Sobic001G378800 Sobic001G378800 Sobic007G226800--Sobic001G378800 Sobic007G146600 Sobic007G146600 Sobic001G343000--Sobic007G146600 Sobic003G393200 Sobic003G393200 Sobic001G343000--Sobic003G393200 Sobic001G343000--Sobic007G048700 Sobic001G343000--Sobic002G182000 Sobic007G030100 Sobic007G030100 Sobic001G343000--Sobic007G030100 Sobic010G028400 Sobic010G028400 Sobic001G343000--Sobic010G028400 Sobic002G070300 Sobic002G070300 Sobic001G343000--Sobic002G070300 Sobic008G132200 Sobic008G132200 Sobic001G343000--Sobic008G132200 Sobic001G343000--Sobic001G012900 Sobic002G395500 Sobic002G395500 Sobic003G190600--Sobic002G395500 Sobic001G389200 Sobic001G389200 Sobic003G190600--Sobic001G389200 Sobic002G023100 Sobic002G023100 Sobic003G190600--Sobic002G023100 Sobic001G378200 Sobic001G378200 Sobic003G190600--Sobic001G378200 Sobic001G485300 Sobic001G485300 Sobic003G190600--Sobic001G485300 Sobic007G118500 Sobic007G118500 Sobic003G190600--Sobic007G118500 Sobic006G012700 Sobic006G012700 Sobic003G190600--Sobic006G012700 Sobic003G190600--Sobic004G060300 Sobic001G047600 Sobic001G047600 Sobic003G190600--Sobic001G047600
Octagon: transcription factors


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