Gene annotation
Transcriptome id Sobic.001G204700.1
Synonym Sb01g018080
Functional annotation expressed protein
UniProt C5WX92
Pfam -
Panther DB PTHR36773
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G63390 : -
RAP-DB (Rice) LOC_Os11g40200.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G204700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G397100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
2 Sobic.004G282500 PPR repeat domain containing protein, putative, expressed -
3 Sobic.004G043600 expressed protein -
4 Sobic.002G183300 GTP binding protein, putative, expressed -
5 Sobic.001G122200 zinc finger protein, putative, expressed K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD
6 Sobic.003G205100 helicase, putative, expressed K11136: regulator of telomere elongation helicase 1
7 Sobic.001G033600 pentatricopeptide, putative, expressed -
8 Sobic.008G163400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
9 Sobic.001G268300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@queuine tRNA-ribosyltransferase, putative, expressed K15407: queuine tRNA-ribosyltransferase subunit QTRTD1
10 Sobic.006G262800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.010G209700 expressed protein -
12 Sobic.001G529500 PPR repeat domain containing protein, putative, expressed -
13 Sobic.010G153000 expressed protein -
14 Sobic.009G155400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
15 Sobic.007G070300 OsFBL41 - F-box domain and LRR containing protein, expressed -
16 Sobic.010G046400 glyoxalase/bleomycin resistance protein/dioxygenase, putative, expressed -
17 Sobic.002G182000 cwfJ-like family protein, putative, expressed -
18 Sobic.009G116400 pentatricopeptide, putative, expressed -
19 Sobic.006G262700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phytosulfokine receptor precursor, putative, expressed -
20 Sobic.008G031200 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic001G204700 Sobic001G204700 Sobic003G397100 Sobic003G397100 Sobic001G204700--Sobic003G397100 Sobic004G282500 Sobic004G282500 Sobic001G204700--Sobic004G282500 Sobic004G043600 Sobic004G043600 Sobic001G204700--Sobic004G043600 Sobic002G183300 Sobic002G183300 Sobic001G204700--Sobic002G183300 Sobic001G122200 Sobic001G122200 Sobic001G204700--Sobic001G122200 Sobic003G205100 Sobic003G205100 Sobic001G204700--Sobic003G205100 Sobic001G033600 Sobic001G033600 Sobic001G204700--Sobic001G033600 Sobic008G163400 Sobic008G163400 Sobic001G204700--Sobic008G163400 Sobic001G268300 Sobic001G268300 Sobic001G204700--Sobic001G268300 Sobic001G242300 Sobic001G242300 Sobic003G397100--Sobic001G242300 Sobic002G123600 Sobic002G123600 Sobic003G397100--Sobic002G123600 Sobic002G260700 Sobic002G260700 Sobic003G397100--Sobic002G260700 Sobic008G090300 Sobic008G090300 Sobic003G397100--Sobic008G090300 Sobic008G169400 Sobic008G169400 Sobic003G397100--Sobic008G169400 Sobic008G112100 Sobic008G112100 Sobic003G397100--Sobic008G112100 Sobic010G143600 Sobic010G143600 Sobic003G397100--Sobic010G143600 Sobic001G448100 Sobic001G448100 Sobic003G397100--Sobic001G448100 Sobic008G031200 Sobic008G031200 Sobic003G397100--Sobic008G031200 Sobic004G282500--Sobic001G268300 Sobic006G262800 Sobic006G262800 Sobic004G282500--Sobic006G262800 Sobic003G325900 Sobic003G325900 Sobic004G282500--Sobic003G325900 Sobic005G078700 Sobic005G078700 Sobic004G282500--Sobic005G078700 Sobic004G282500--Sobic001G122200 Sobic009G154900 Sobic009G154900 Sobic004G282500--Sobic009G154900 Sobic001G203600 Sobic001G203600 Sobic004G282500--Sobic001G203600 Sobic004G282500--Sobic008G031200 Sobic003G412000 Sobic003G412000 Sobic004G282500--Sobic003G412000 Sobic003G113400 Sobic003G113400 Sobic004G043600--Sobic003G113400 Sobic003G167000 Sobic003G167000 Sobic004G043600--Sobic003G167000 Sobic004G043600--Sobic001G203600 Sobic007G207600 Sobic007G207600 Sobic004G043600--Sobic007G207600 Sobic003G112600 Sobic003G112600 Sobic004G043600--Sobic003G112600 Sobic003G142400 Sobic003G142400 Sobic004G043600--Sobic003G142400 Sobic007G226800 Sobic007G226800 Sobic004G043600--Sobic007G226800 Sobic001G343000 Sobic001G343000 Sobic004G043600--Sobic001G343000 Sobic003G190600 Sobic003G190600 Sobic004G043600--Sobic003G190600 Sobic004G025100 Sobic004G025100 Sobic002G183300--Sobic004G025100 Sobic001G401400 Sobic001G401400 Sobic002G183300--Sobic001G401400 Sobic005G059400 Sobic005G059400 Sobic002G183300--Sobic005G059400 Sobic001G105600 Sobic001G105600 Sobic002G183300--Sobic001G105600 Sobic009G253400 Sobic009G253400 Sobic002G183300--Sobic009G253400 Sobic001G334100 Sobic001G334100 Sobic002G183300--Sobic001G334100 Sobic002G183300--Sobic001G122200 Sobic002G183300--Sobic001G204700 Sobic008G000600 Sobic008G000600 Sobic002G183300--Sobic008G000600 Sobic001G122200--Sobic008G163400 Sobic010G068900 Sobic010G068900 Sobic001G122200--Sobic010G068900 Sobic001G122200--Sobic004G282500 Sobic004G241000 Sobic004G241000 Sobic001G122200--Sobic004G241000 Sobic001G122200--Sobic006G262800 Sobic001G122200--Sobic001G268300 Sobic001G396800 Sobic001G396800 Sobic001G122200--Sobic001G396800 Sobic006G069100 Sobic006G069100 Sobic001G122200--Sobic006G069100 Sobic001G149100 Sobic001G149100 Sobic001G122200--Sobic001G149100 Sobic003G194800 Sobic003G194800 Sobic003G205100--Sobic003G194800 Sobic001G043200 Sobic001G043200 Sobic003G205100--Sobic001G043200 Sobic003G205100--Sobic001G343000 Sobic007G140100 Sobic007G140100 Sobic003G205100--Sobic007G140100 Sobic003G205100--Sobic001G242300 Sobic009G108400 Sobic009G108400 Sobic003G205100--Sobic009G108400 Sobic009G120400 Sobic009G120400 Sobic003G205100--Sobic009G120400 Sobic007G070300 Sobic007G070300 Sobic003G205100--Sobic007G070300 Sobic003G205100--Sobic003G397100 Sobic006G095000 Sobic006G095000 Sobic001G033600--Sobic006G095000 Sobic004G030600 Sobic004G030600 Sobic001G033600--Sobic004G030600 Sobic003G396800 Sobic003G396800 Sobic001G033600--Sobic003G396800 Sobic002G182000 Sobic002G182000 Sobic001G033600--Sobic002G182000 Sobic002G192900 Sobic002G192900 Sobic001G033600--Sobic002G192900 Sobic003G359400 Sobic003G359400 Sobic001G033600--Sobic003G359400 Sobic006G085800 Sobic006G085800 Sobic001G033600--Sobic006G085800 Sobic001G033600--Sobic006G262800 Sobic003G184300 Sobic003G184300 Sobic001G033600--Sobic003G184300 Sobic003G239000 Sobic003G239000 Sobic008G163400--Sobic003G239000 Sobic008G163400--Sobic004G241000 Sobic009G155400 Sobic009G155400 Sobic008G163400--Sobic009G155400 Sobic009G116400 Sobic009G116400 Sobic008G163400--Sobic009G116400 Sobic004G256900 Sobic004G256900 Sobic008G163400--Sobic004G256900 Sobic008G163400--Sobic006G262800 Sobic008G163400--Sobic001G122200 Sobic002G267600 Sobic002G267600 Sobic008G163400--Sobic002G267600 Sobic008G163400--Sobic001G149100 Sobic009G041800 Sobic009G041800 Sobic001G268300--Sobic009G041800 Sobic008G179000 Sobic008G179000 Sobic001G268300--Sobic008G179000 Sobic001G268300--Sobic006G262800 Sobic002G362200 Sobic002G362200 Sobic001G268300--Sobic002G362200 Sobic001G268300--Sobic008G031200 Sobic001G268300--Sobic003G142400 Sobic010G252200 Sobic010G252200 Sobic001G268300--Sobic010G252200 Sobic001G268300--Sobic004G282500 Sobic001G268300--Sobic005G078700
Octagon: transcription factors


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