Gene annotation
Transcriptome id Sobic.007G207600.1
Synonym HMGR1, HMG1, Sb07g027480
Functional annotation 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed
UniProt C5YIP3
Pfam PF00368
Panther DB PTHR10572 PTHR10572:SF10
NCBI CDD -
KEGG Orthology K00021; hydroxymethylglutaryl-CoA reductase (NADPH)
Gene Ontology GO:0015936; coenzyme A metabolic process GO:0004420hydroxymethylglutaryl-CoA reductase (NADPH) activity


Orthologs (automatic annotation)
TAIR AT1G76490 : hydroxy methylglutaryl CoA reductase 1
RAP-DB (Rice) LOC_Os08g40180.1 : 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed
MaizeGDB (Corn) Zm00025a019785 , Zm00025a033818 , Zm00025a014227 , Zm00025a047480
Brachypodium KQJ98956 , KQJ90788
Barley HORVU7Hr1G051260.7 , HORVU7Hr1G051260.6 , HORVU7Hr1G051260.5 , HORVU7Hr1G051260.3 , HORVU7Hr1G051260.2 , HORVU7Hr1G051260.1 , HORVU7Hr1G051260.8 , HORVU5Hr1G073970.3 , HORVU5Hr1G073970.2 , HORVU5Hr1G073970.6
Wheat TraesCS7B02G142500 , TraesCS5B02G269600 , TraesCS7A02G248800 , TraesCS7A02G248800 , TraesCS5A02G269300 , TraesCS5D02G277500 , TraesCS7D02G247800 , TraesCS7D02G247800
Populus -


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cDNA sequences
Sobic.007G207600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G043600 expressed protein -
2 Sobic.003G112600 endoplasmic oxidoreductin-1 precursor, putative, expressed K10950: ERO1-like protein alpha
3 Sobic.003G402900 HYS1, putative, expressed -
4 Sobic.003G392550 - -
5 Sobic.001G335000 erlin-2 precursor, putative, expressed -
6 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
7 Sobic.004G060300 DNA binding protein, putative, expressed -
8 Sobic.001G193100 expressed protein -
9 Sobic.003G043800 BT1 family protein, putative, expressed -
10 Sobic.007G118500 galactosyltransferase family protein, putative, expressed -
11 Sobic.003G404100 CBS domain-containing protein, putative, expressed -
12 Sobic.002G332100 expressed protein -
13 Sobic.003G167000 protein phosphotase protein, putative, expressed -
14 Sobic.001G533100 GHMP kinases ATP-binding protein, putative, expressed K05305: fucokinase
15 Sobic.005G059500 expressed protein -
16 Sobic.002G070300 expressed protein -
17 Sobic.001G505600 DENN domain containing protein, expressed -
18 Sobic.004G185500 extracellular ligand-gated ion channel, putative, expressed -
19 Sobic.003G004100 expressed protein -
20 Sobic.008G058200 pectate lyase family protein, expressed K01728: pectate lyase


Gene co-expression network
sample Sobic007G207600 Sobic007G207600 Sobic004G043600 Sobic004G043600 Sobic007G207600--Sobic004G043600 Sobic003G112600 Sobic003G112600 Sobic007G207600--Sobic003G112600 Sobic003G402900 Sobic003G402900 Sobic007G207600--Sobic003G402900 Sobic003G392550 Sobic003G392550 Sobic007G207600--Sobic003G392550 Sobic001G335000 Sobic001G335000 Sobic007G207600--Sobic001G335000 Sobic001G012900 Sobic001G012900 Sobic007G207600--Sobic001G012900 Sobic004G060300 Sobic004G060300 Sobic007G207600--Sobic004G060300 Sobic001G193100 Sobic001G193100 Sobic007G207600--Sobic001G193100 Sobic003G043800 Sobic003G043800 Sobic007G207600--Sobic003G043800 Sobic003G113400 Sobic003G113400 Sobic004G043600--Sobic003G113400 Sobic003G167000 Sobic003G167000 Sobic004G043600--Sobic003G167000 Sobic001G203600 Sobic001G203600 Sobic004G043600--Sobic001G203600 Sobic004G043600--Sobic007G207600 Sobic004G043600--Sobic003G112600 Sobic003G142400 Sobic003G142400 Sobic004G043600--Sobic003G142400 Sobic007G226800 Sobic007G226800 Sobic004G043600--Sobic007G226800 Sobic001G343000 Sobic001G343000 Sobic004G043600--Sobic001G343000 Sobic003G190600 Sobic003G190600 Sobic004G043600--Sobic003G190600 Sobic003G112600--Sobic004G043600 Sobic003G112600--Sobic007G207600 Sobic003G112600--Sobic003G142400 Sobic003G435400 Sobic003G435400 Sobic003G112600--Sobic003G435400 Sobic008G058200 Sobic008G058200 Sobic003G112600--Sobic008G058200 Sobic003G112600--Sobic003G392550 Sobic004G185500 Sobic004G185500 Sobic003G112600--Sobic004G185500 Sobic001G023600 Sobic001G023600 Sobic003G112600--Sobic001G023600 Sobic001G414100 Sobic001G414100 Sobic003G112600--Sobic001G414100 Sobic007G030100 Sobic007G030100 Sobic003G402900--Sobic007G030100 Sobic003G368400 Sobic003G368400 Sobic003G402900--Sobic003G368400 Sobic001G385000 Sobic001G385000 Sobic003G402900--Sobic001G385000 Sobic004G017900 Sobic004G017900 Sobic003G402900--Sobic004G017900 Sobic007G189100 Sobic007G189100 Sobic003G402900--Sobic007G189100 Sobic002G147100 Sobic002G147100 Sobic003G402900--Sobic002G147100 Sobic006G215100 Sobic006G215100 Sobic003G402900--Sobic006G215100 Sobic002G147200 Sobic002G147200 Sobic003G402900--Sobic002G147200 Sobic007G043700 Sobic007G043700 Sobic003G402900--Sobic007G043700 Sobic009G122500 Sobic009G122500 Sobic003G392550--Sobic009G122500 Sobic003G346400 Sobic003G346400 Sobic003G392550--Sobic003G346400 Sobic003G036500 Sobic003G036500 Sobic003G392550--Sobic003G036500 Sobic003G392550--Sobic001G012900 Sobic001G085700 Sobic001G085700 Sobic003G392550--Sobic001G085700 Sobic004G254800 Sobic004G254800 Sobic003G392550--Sobic004G254800 Sobic003G392550--Sobic001G335000 Sobic003G392550--Sobic004G060300 Sobic002G115500 Sobic002G115500 Sobic003G392550--Sobic002G115500 Sobic001G335000--Sobic009G122500 Sobic001G335000--Sobic004G060300 Sobic001G156900 Sobic001G156900 Sobic001G335000--Sobic001G156900 Sobic004G122900 Sobic004G122900 Sobic001G335000--Sobic004G122900 Sobic001G335000--Sobic001G012900 Sobic001G043200 Sobic001G043200 Sobic001G335000--Sobic001G043200 Sobic001G335000--Sobic001G193100 Sobic003G181700 Sobic003G181700 Sobic001G335000--Sobic003G181700 Sobic007G118500 Sobic007G118500 Sobic001G335000--Sobic007G118500 Sobic003G293000 Sobic003G293000 Sobic001G012900--Sobic003G293000 Sobic001G012900--Sobic001G193100 Sobic005G059500 Sobic005G059500 Sobic001G012900--Sobic005G059500 Sobic001G161700 Sobic001G161700 Sobic001G012900--Sobic001G161700 Sobic001G012900--Sobic004G060300 Sobic010G223400 Sobic010G223400 Sobic001G012900--Sobic010G223400 Sobic001G012900--Sobic003G346400 Sobic001G012900--Sobic001G335000 Sobic001G012900--Sobic009G122500 Sobic004G060300--Sobic007G118500 Sobic004G060300--Sobic009G122500 Sobic003G394500 Sobic003G394500 Sobic004G060300--Sobic003G394500 Sobic004G060300--Sobic001G335000 Sobic004G060300--Sobic003G346400 Sobic004G060300--Sobic007G030100 Sobic001G389200 Sobic001G389200 Sobic004G060300--Sobic001G389200 Sobic004G084500 Sobic004G084500 Sobic004G060300--Sobic004G084500 Sobic004G060300--Sobic001G012900 Sobic001G193100--Sobic010G223400 Sobic003G394200 Sobic003G394200 Sobic001G193100--Sobic003G394200 Sobic001G193100--Sobic001G012900 Sobic001G061200 Sobic001G061200 Sobic001G193100--Sobic001G061200 Sobic007G173700 Sobic007G173700 Sobic001G193100--Sobic007G173700 Sobic001G193100--Sobic004G084500 Sobic001G193100--Sobic004G060300 Sobic004G078700 Sobic004G078700 Sobic001G193100--Sobic004G078700 Sobic010G074900 Sobic010G074900 Sobic001G193100--Sobic010G074900 Sobic006G217300 Sobic006G217300 Sobic003G043800--Sobic006G217300 Sobic001G122500 Sobic001G122500 Sobic003G043800--Sobic001G122500 Sobic010G026300 Sobic010G026300 Sobic003G043800--Sobic010G026300 Sobic004G124500 Sobic004G124500 Sobic003G043800--Sobic004G124500 Sobic004G207900 Sobic004G207900 Sobic003G043800--Sobic004G207900 Sobic001G378200 Sobic001G378200 Sobic003G043800--Sobic001G378200 Sobic006G207900 Sobic006G207900 Sobic003G043800--Sobic006G207900 Sobic006G055400 Sobic006G055400 Sobic003G043800--Sobic006G055400 Sobic005G207400 Sobic005G207400 Sobic003G043800--Sobic005G207400
Octagon: transcription factors


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